Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
332 (305) |
| PWM (Da): |
35788.3 (32844.7) |
Transmb domain: |
i5-27o |
| PI (pH): |
9.83 (9.96) |
Peptide Signal: |
cut: 28 range:28-332 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MRNSVCLHST VALLLIWVLV VSHTVDGHRS GLKVGYYRRT CPAAENIVRA TVAKAVKANR GVAAGLIRMH FHDCFVRGCD GSILIDSTPG NKAEKDSPTN NPSLHGFEVI DEAKAKIEAK
CPHVVSCADI LAFAARDSAY QTGKSRWQVP AGRRDGRTSR DTDIIGNLPP PSFNVDQLTQ NFAAKGLSQE DMVTLSGAHS LGVSHCSSFS SRLQSKSNGT LDPRLAATLR AKCAPQLAGI
SDPTVAMDSF TPAILDNKYY KGLLLNRGLF TSDQTLLTNP FTSGIVHLNS KNPSLWRDKF GSAMVRMGAI DVLTGSKGEI RRNCRIINSN YY
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Retrieve as FASTA
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| Remarks |
Complete sequence from genomic (no prediction from SymDB, scaffold1440) and RNA seq. (gba_locus_49153_iso_1_len_1135_ver_2, rame shift in the assembly).. No EST found. |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAGGAATT CAGTTTGTCT TCATTCAACT GTGGCTCTAC TGTTAATATG GGTAATGGTA GTTAGTCATA CGGTTGATGG CCACCAATCT GGGTTAAAGG TGGGCTACTA CAGCCGCACA
TGCCCTGCGG CTGAGGACAT TGTAAGAGCA ACTGTGGCCA AGGCTGTGAA GGCAAATCGT GGTGTAGCCG CGGGTCTCAT ACGGATGCAT TTTCACGATT GCTTTGTCAG AGTAAGTACT
CATTACATAT AATTATAACA TTTGGGCATG AATTCAACTT TATAATGATC TCATCGATTG TTATGTTGAA TTTACAGGGT TGCGATGGGT CAATCCTGAT CGATTCCACC CCTGGAAATA
AAGCAGAGAA AGATTCACCT GCGAACAATC CCAGTCTTCA TGGGTTCGAA GTAATCGACG AAGCGAAGGC CAAAATAGAA GCCAAATGTC CACAAGTCGT GTCGTGTGCT GACATACTCG
CCTTTGCGGC ACGAGACAGT GCATATCAGG TAATTATTAC ATATTTTATC CATATTCTTA TATACCCACA GTTGCAATAC TCTAATGTTA ATGTTAATGT TAATGTACTG TTATCAACCA
ATAACAAGAT TTCTCCAATA TTCTGCACAC ATTAATTGAT GGCAGAGTTA TTTTCTTGAA TGTGTAGACT GGTAAGAGTC GATGGCAGGT TCCAGCTGGA AGAAGGGATG GAAGGACATC
TCGAGACACC GATATTATAG GAAATCTGCC TCCTCCTTCA TTGAATGTCG ACCAGTTGAC ACAGAATTTC GCAGCAAAGG GTCTTTCACA GGAAGACATG GTCACTCTTT CAGGTACCAG
CCTATAACCC TACCCAATAT TACTGATTTA TTTATTTAGC AAAAAAAAAT CATCATAATC AAAAAATAAT AATAATAATC ATAATACTTG GTTTGTCATA TAATCTCTCT CTTTCAGGGG
CACATTCTCT AGGGGTTTCG CATTGTTCTT CATTCAGCAG TAGGCTTCAA TCCAAATCCA ACGGAACTCT CGACCCTCGA CTTGCCGCCA CGCTCAGAGC TAAATGCGCG CCCCAGTTGG
CCGGAATTTC CGTCGACCCA ACCGTGGCCA TGGACTCTTT CACTCCTGCT ATTCTCGATA ATAAATACTA CAAGGGCCTT CTTCTCAACC GTGGATTGTT TACCTCCGAT CAAACACTAC
TCACCAATCC TTTCACCTCC GGCATGGTCC ACCTCAACTC CAAAAACCCA TCGCTCTGGC GTGACAAATT CGGCTCTGCA ATGGTAAGGA TGGGTGCGAT CGACGTCTTG ACCGGATCTA
AGGGCGAGAT CAGAAGAAAC TGTCGAATCA TTAATTCCAA CTATTATTAA
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAGGAATT CAGTTTGTCT TCATTCAACT GTGGCTCTAC TGTTAATATG GGTATTGGTA GTTAGTCATA CGGTTGATGG CCACCGATCT GGGTTAAAGG TGGGCTACTA CCGCCGCACA
TGCCCTGCGG CTGAGAACAT TGTAAGAGCA ACTGTGGCCA AGGCTGTGAA GGCAAATCGT GGTGTAGCCG CGGGTCTCAT ACGGATGCAT TTTCACGATT GCTTTGTCAG AGGTTGCGAC
GGGTCAATCC TGATCGATTC CACCCCTGGA AATAAAGCAG AGAAAGATTC ACCTACGAAC AATCCCAGTC TTCATGGGTT CGAAGTAATC GACGAAGCAA AGGCCAAAAT AGAAGCCAAA
TGTCCACACG TCGTGTCGTG TGCTGACATA CTCGCCTTTG CGGCACGAGA TAGTGCATAT CAGACTGGTA AGAGTCGATG GCAGGTTCCA GCTGGAAGAA GGGACGGAAG GACATCTCGA
GACACCGATA TTATAGGAAA TCTGCCTCCT CCTTCATTCA ATGTCGACCA GTTGACACAG AATTTCGCAG CAAAGGGTCT TTCACAGGAG GACATGGTCA CTCTTTCAGG GGCACATTCT
CTAGGGGTTT CGCATTGTTC TTCATTCAGC AGTAGGCTTC AATCCAAATC CAACGGAACT CTCGACCCTC GACTTGCCGC CACGCTCAGA GCTAAATGCG CGCCCCAGTT GGCCGGAATT
TCCGACCCAA CCGTGGCCAT GGACTCTTTC ACTCCTGCTA TTCTCGATAA TAAATACTAC AAGGGCCTTC TTCTCAACCG TGGATTGTTT ACCTCCGATC AAACACTACT CACCAATCCT
TTCACCTCCG GCATAGTCCA CCTCAACTCC AAAAACCCAT CGCTCTGGCG TGACAAATTC GGCTCTGCAA TGGTAAGGAT GGGTGCGATC GACGTCTTGA CCGGATCTAA GGGCGAGATC
AGAAGAAACT GTCGAATCAT TAATTCCAAC TATTATTAA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
CAATTATGAG GAATTCAGTT TGTCTTCATT CAACTGTGGC TCTACTGTTA ATATGGGTAT TGGTAGTTAG TCATACGGTT GATGGCCACC GATCTGGGTT AAAGGTGGGC TACTACCGCC
GCACATGCCC TGCGGCTGAG AACATTGTAA GAGCAACTGT GGCCAAGGCT GTGAAGGCAA ATCGTGGTGT AGCCGCGGGT CTCATACGGA TGCATTTTCA CGATTGCTTT GTCAGAGGTT
GCGACGGGTC AATCCTGATC GATTCCACCC CTGGAAATAA AGCAGAGAAA GATTCACCTA CGAACAATCC CAGTCTTCAT GGGTTCGAAG TAATCGACGA AGCAAAGGCC AAAATAGAAG
CCAAATGTCC ACACGTCGTG TCGTGTGCTG ACATACTCGC CTTTGCGGCA CGAGATAGTG CATATCAGAC TGGTAAGAGT CGATGGCAGG TTCCAGCTGG AAGAAGGGAC GGAAGGACAT
CTCGAGACAC CGATATTATA GGAAATCTGC CTCCTCCTTC ATTCAATGTC GACCAGTTGA CACAGAATTT CGCAGCAAAG GGTCTTTCAC AGGAGGACAT GGTCACTCTT TCAGGGGCAC
ATTCTCTAGG GGTTTCGCAT TGTTCTTCAT TCAGCAGTAG GCTTCAATCC AAATCCAACG GAACTCTCGA CCCTCGACTT GCCGCCACGC TCAGAGCTAA ATGCGCGCCC CAGTTGGCCG
GAATTTCCGA CCCAACCGTG GCCATGGACT CTTTCACTCC TGCTATTCTC GATAATAAAT ACTACAAGGG CCTTCTTCTC AACCGTGGAT TGTTTACCTC CGATCAAACA CTACTCACCA
ATCCTTTCAC CTCCGGCATA GTCCACCTCA ACTCCAAAAA CCCATCGCTC TGGCGTGACA AATTCGGCTC TGCAATGGTA AGGATGGGTG CGATCGACGT CTTGACCGGA TCTAAGGGCG
AGATCAGAAG AAACTGTCGA ATCATTAATT CCAACTATTA TTAAATGCAT CCAAATGCGT CCTGCGCAGA ACAATTTCGA TAATTAAGTT GTCATATACG CCTGCAAAAT GATCTCCTTG
CCAATAATCT AGTTTGCAAA ACTAGTTATA AAAAGA
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Retrieve as FASTA
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