Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
329 (306) |
| PWM (Da): |
35337.9 (32884.5) |
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| PI (pH): |
8.67 (9.02) |
Peptide Signal: |
cut: 26 range:24-329 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MALIDAACLI LKLLLICISL VETSGAQLSP VFYKASCPRL EELVQRVVKQ AVDKDPRMAA SLLRLNFHDC FVNGCDASVL LDDTGAFQGE KTAVPNNNSL RGFEVIDNIK TAVEKSCSST
VSCADIITIA ARDAVVLAGG PTWTPMLGRR DSRTASLNAA NTAIPAPNNT LAAIISKCKA VGLSVQDCVT LSGAHTIGRA RCTSFSSRLY NFVKTGNPDP TINSSYLNTL RGICPQGGNG
NAVTPLDQTT RDKFDNNYFT NLQNNQGLLQ SDQEFFSTTG ASTIPLVKLY SRNQSAFFKN FQTSMINMGN IKPLTGSNGE IRRNCRKMN
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Retrieve as FASTA
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| Remarks |
Complete sequence fromgenomic (no prediction from SymDB, scaffold12548 ) and RNA seq (gba_locus_50904_iso_1_len_1106_ver_2). No EST found. |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCCTTAA TCGACGCAGC TTGCTTAATT TTGAAGCTTT TACTGATTTG CATTTCACTT GTAGAAACGA GTGGAGCTCA ACTGAGTCCC GTGTTTTACA AGGCTTCCTG CCCGAGGCTT
GAAGAACTTG TTCAGCGAGT GGTTAAGCAA GCTGTTGACA AGGATCCTCG GATGGCAGCT TCTCTTCTCC GCCTCAACTT TCACGATTGC TTCGTTAATG TAGTCTATCC AATTAGCTTT
TATAATTTAA TTGTGCCAGT TAAATAAATG TTCCTTTCCA TTAGTTATGC AGAGACTGAT TGATGTGAAT GGCAGGGATG TGATGCATCG GTGTTGCTTG ATGACACTGG TGCATTTCAA
GGCGAAAAAA CGGCTGTTCC AAACAACAAC TCGTTAAGAG GATTTGAAGT CATAGACAAC ATTAAAACAG CCGTCGAGAA ATCGTGCAGC TCCACAGTCT CTTGCGCGGA CATCATCACT
ATTGCTGCTA GAGATGCAGT TGTTCTCGTA TGTATCTCCT CCGCCGTTGG TTCGTTTTAC ATTTCTTTAC ATGGGCATGA ATAAAAAATG TGGATCTAGA GAAGTGATTT ATATATTGAG
TTATTATAAT TATATTTTTG TACTGAGAGT TCATTCCTAT ATTTAACATA TAGGCGGGAG GCCCAACTTG GACTCCCATG TTAGGAAGAA GGGACAGCAG AACTGCAAGT TTAAACGCAG
CAAACACGGC GATTCCAGCA CCAAACAACA CCCTGGCTGC CATAATTTCC AAATGTAAAG CAGTCGGACT ATCAGTTCAA GATTGCGTAA CATTATCAGG TATACAAAAT TAAAATCGGA
CCTGAATTAA TATCAGTTAA GGTATTACTA AATTTTGGGT CGAATGAATA CTTGATTAAA ATGATTTTAG TCAACAAGTG GGATTTAAAT GTGCAGGTGC TCATACCATT GGACGGGCTC
GCTGCACAAG TTTCAGTTCT CGACTATATA ATTTTGTCAA AACGGGAAAT CCAGACCCTA CTATAAACTC TTCTTATTTA AACACTCTAC GGGGAATCTG CCCTCAGGGA GGTAATGGCA
ATGCAGTGAC TCCACTTGAC CAGACCACGC GAGACAAGTT TGACAACAAT TATTTTACAA ATTTACAGAA TAATCAAGGC CTTCTACAGT CTGATCAGGA ATTTTTTTCT ACAACTGGAG
CATCTACAAT ACCCCTGGTG AAACTTTACA GTAGAAACCA AAGCGCTTTC TTTAAGAATT TCCAGACTTC CATGATAAAC ATGGGAAATA TAAAGCCTCT TACGGGTAGC AACGGGGAAA
TACGGCGCAA TTGCAGAAAA ATGAATTAG
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCCTTAA TCGACGCAGC TTGCTTAATT TTGAAGCTTT TACTGATTTG CATTTCACTT GTAGAAACGA GTGGAGCTCA ACTGAGTCCC GTGTTTTACA AGGCTTCCTG CCCGAGGCTT
GAAGAACTTG TTCAGCGAGT GGTTAAGCAA GCTGTTGACA AGGATCCTCG GATGGCAGCT TCTCTTCTCC GCCTCAACTT TCACGATTGC TTCGTTAATG GATGTGATGC ATCGGTGTTG
CTTGATGACA CTGGTGCATT TCAAGGCGAA AAAACGGCTG TTCCAAACAA CAACTCGTTA AGAGGATTTG AAGTCATAGA CAACATTAAA ACAGCCGTCG AGAAATCGTG CAGCTCCACA
GTCTCTTGCG CGGACATCAT CACTATTGCT GCTAGAGATG CAGTTGTTCT CGCGGGAGGC CCAACTTGGA CTCCCATGTT AGGAAGAAGG GACAGCAGAA CTGCAAGTTT AAACGCAGCA
AACACGGCGA TTCCAGCACC AAACAACACC CTGGCTGCCA TAATTTCCAA ATGTAAAGCA GTCGGACTAT CAGTTCAAGA TTGCGTAACA TTATCAGGTG CTCATACCAT TGGACGGGCT
CGCTGCACAA GTTTCAGTTC TCGACTATAT AATTTTGTCA AAACGGGAAA TCCAGACCCT ACTATAAACT CTTCTTATTT AAACACTCTA CGGGGAATCT GCCCTCAGGG AGGTAATGGC
AATGCAGTGA CTCCACTTGA CCAGACCACG CGAGACAAGT TTGACAACAA TTATTTTACA AATTTACAGA ATAATCAAGG CCTTCTACAG TCTGATCAGG AATTTTTTTC TACAACTGGA
GCATCTACAA TACCCCTGGT GAAACTTTAC AGTAGAAACC AAAGCGCTTT CTTTAAGAAT TTCCAGACTT CCATGATAAA CATGGGAAAT ATAAAGCCTC TTACGGGTAG CAACGGGGAA
ATACGGCGCA ATTGCAGAAA AATGAATTAG
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
TAGCTGTCGG CAATGGCCTT AATCGACGCA GCTTGCTTAA TTTTGAAGCT TTTACTGATT TGCATTTCAC TTGTAGAAAC GAGTGGAGCT CAACTGAGTC CCGTGTTTTA CAAGGCTTCC
TGCCCGAGGC TTGAAGAACT TGTTCAGCGA GTGGTTAAGC AAGCTGTTGA CAAGGATCCT CGGATGGCAG CTTCTCTTCT CCGCCTCAAC TTTCACGATT GCTTCGTTAA TGGATGTGAT
GCATCGGTGT TGCTTGATGA CACTGGTGCA TTTCAAGGCG AAAAAACGGC TGTTCCAAAC AACAACTCGT TAAGAGGATT TGAAGTCATA GACAACATTA AAACAGCCGT CGAGAAATCG
TGCAGCTCCA CAGTCTCTTG CGCGGACATC ATCACTATTG CTGCTAGAGA TGCAGTTGTT CTCGCGGGAG GCCCAACTTG GACTCCCATG TTAGGAAGAA GGGACAGCAG AACTGCAAGT
TTAAACGCAG CAAACACGGC GATTCCAGCA CCAAACAACA CCCTGGCTGC CATAATTTCC AAATGTAAAG CAGTCGGACT ATCAGTTCAA GATTGCGTAA CATTATCAGG TGCTCATACC
ATTGGACGGG CTCGCTGCAC AAGTTTCAGT TCTCGACTAT ATAATTTTGT CAAAACGGGA AATCCAGACC CTACTATAAA CTCTTCTTAT TTAAACACTC TACGGGGAAT CTGCCCTCAG
GGAGGTAATG GCAATGCAGT GACTCCACTT GACCAGACCA CGCGAGACAA GTTTGACAAC AATTATTTTA CAAATTTACA GAATAATCAA GGCCTTCTAC AGTCTGATCA GGAATTTTTT
TCTACAACTG GAGCATCTAC AATACCCCTG GTGAAACTTT ACAGTAGAAA CCAAAGCGCT TTCTTTAAGA ATTTCCAGAC TTCCATGATA AACATGGGAA ATATAAAGCC TCTTACGGGT
AGCAACGGGG AAATACGGCG CAATTGCAGA AAAATGAATT AGTTGATATT CTATTTGCCT TTTAAAAGAA ACAGTCTGTG GTGTCAATAG ATATTCGTAC AATGCATTTC GTTATATATA
TTTTGGACAA TGCATTTCTC TCTCTC
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Retrieve as FASTA
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