Sequence Properties
first value : protein
second value (mature protein)
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Length (aa):  |
317 (295) |
| PWM (Da): |
34400.3 (32073.1) |
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| PI (pH):
| 8.55 (8.48) |
Peptide Signal:
| cut: 23 range:23-317 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MSSFTKILPC VLVFLVVGHA NAQLRSDFYK KSCGNVFDLV RPVLEEAVRK EARMAASILR LHFHDCFVNG CDGSILLDDT SSFTGEKSAG PNQNSIRGFE VIDAIKTAVE KACPGVVSCA
DILTIAARDS VVLSNGPSWE VKLGRRDSTT ASLDDANRNI PVPSSTVNQL ISRFRAQGLS ARDMVALSGA HTIGKARCTT FRDRIYNETT INERYAKFVS RRCPASGGDD NLSPLDVGSA
TRFDNGYFQN LKCEKGLLHS DQVLQSGGSS TASIVDAYSN NPSAFYKDFI QAMIKMGNNK PLTGYDGQIR RNCRIVN
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Retrieve as FASTA
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| Remarks |
Complete sequence from genomic (no prediction from SymDB, only fragment from small contig) and RNA seq.(gba_locus_52444_iso_1_len_1168_ver_2) |
CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGTCTTCCT TCACAAAAAT TTTGCCGTGT GTTCTGGTCT TTCTCGTGGT TGGTCATGCG AATGCTCAGT TGAGAAGCGA CTTTTACAAA AAATCATGCG GAAATGTTTT CGATTTAGTC
CGCCCTGTGC TGGAAGAGGC AGTGCGCAAA GAAGCTCGAA TGGCTGCGTC TATTTTGCGC CTTCACTTCC ATGACTGCTT CGTCAATGGC TGTGACGGAT CAATACTCCT TGACGACACC
TCCTCATTTA CAGGTGAAAA GAGTGCCGGC CCCAACCAGA ACTCTATAAG AGGTTTCGAG GTTATCGACG CCATCAAAAC CGCAGTGGAA AAAGCATGCC CTGGCGTTGT GTCGTGTGCT
GATATTCTTA CCATTGCTGC TAGGGATTCC GTAGTGTTGA GCAATGGCCC CTCATGGGAA GTCAAACTGG GTAGAAGGGA CTCCACAACA GCTAGCCTAG ATGATGCTAA CAGAAACATA
CCAGTACCAT CATCGACCGT GAACCAGCTC ATTTCTAGGT TCCGAGCCCA AGGACTTTCT GCACGTGACA TGGTAGCACT TTCAGGCGCT CACACAATAG GAAAGGCGCG TTGCACAACA
TTCAGAGACA GAATTTACAA CGAGACAACA ATAAACGAAC GGTATGCCAA GTTTGTTAGT CGAAGGTGTC CTGCCTCTGG GGGAGACGAC AACTTGTCAC CTCTGGATGT CGGAAGCGCC
ACACGTTTTG ACAACGGCTA CTTCCAGAAT TTGAAATGTG AGAAAGGTCT TCTTCACTCC GACCAAGTAT TGCAGTCCGG CGGAAGCTCT ACGGCTTCTA TTGTCGACGC ATACAGCAAT
AATCCAAGCG CCTTCTATAA AGATTTCATT CAAGCAATGA TTAAAATGGG TAACAATAAA CCGCTTACGG GTTACGATGG CCAGATACGC AGAAACTGCA GAATCGTGAA TTAA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
TATCTCGAGG ACTGTCTGTG TTTTATCATC TCTACTCTGC ATCTCTATCG TAAGCTGTCA CCATGTCTTC CTTCACAAAA ATTTTGCCGT GTGTTCTGGT CTTTCTCGTG GTTGGTCATG
CGAATGCTCA GTTGAGAAGC GACTTTTACA AAAAATCATG CGGAAATGTT TTCGATTTAG TCCGCCCTGT GCTGGAAGAG GCAGTGCGCA AAGAAGCTCG AATGGCTGCG TCTATTTTGC
GCCTTCACTT CCATGACTGC TTCGTCAATG GCTGTGACGG ATCAATACTC CTTGACGACA CCTCCTCATT TACAGGTGAA AAGAGTGCCG GCCCCAACCA GAACTCTATA AGAGGTTTCG
AGGTTATCGA CGCCATCAAA ACCGCAGTGG AAAAAGCATG CCCTGGCGTT GTGTCGTGTG CTGATATTCT TACCATTGCT GCTAGGGATT CCGTAGTGTT GAGCAATGGC CCCTCATGGG
AAGTCAAACT GGGTAGAAGG GACTCCACAA CAGCTAGCCT AGATGATGCT AACAGAAACA TACCAGTACC ATCATCGACC GTGAACCAGC TCATTTCTAG GTTCCGAGCC CAAGGACTTT
CTGCACGTGA CATGGTAGCA CTTTCAGGCG CTCACACAAT AGGAAAGGCG CGTTGCACAA CATTCAGAGA CAGAATTTAC AACGAGACAA CAATAAACGA ACGGTATGCC AAGTTTGTTA
GTCGAAGGTG TCCTGCCTCT GGGGGAGACG ACAACTTGTC ACCTCTGGAT GTCGGAAGCG CCACACGTTT TGACAACGGC TACTTCCAGA ATTTGAAATG TGAGAAAGGT CTTCTTCACT
CCGACCAAGT ATTGCAGTCC GGCGGAAGCT CTACGGCTTC TATTGTCGAC GCATACAGCA ATAATCCAAG CGCCTTCTAT AAAGATTTCA TTCAAGCAAT GATTAAAATG GGTAACAATA
AACCGCTTAC GGGTTACGAT GGCCAGATAC GCAGAAACTG CAGAATCGTG AATTAAGAAT AAAAGGCTTA TTGCTGTACC ATATCCCTCG AGCAGCTTTC TGTACTCAGA ATTCTCTGTT
CATGCTCAAT TCATATTTCA TGTTAATAAT TTTTTCGTGA ACTGTGCTAA GTTGCACAAT CCATTGTATG ATCATAGAAG AGGCAAAT
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Retrieve as FASTA
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