Sequence Properties
first value : protein
second value (mature protein)
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Length (aa):  |
362 (341) |
| PWM (Da): |
38924.46 (36661.3) |
Transmb domain: |
i5-24o |
| PI (pH):
| 6.01 (5.62) |
Peptide Signal:
| cut: 22 range:22-362 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MAKYVITLAA MFFCVFVVAS ANAFSAKDVN ALPPPVQGLS WTFYNQSCPN LESIVKARID FYLNQDITQA AGLLRLHFHD CFVQGCDASV LLNATSSEQV APPNLTLRAM AFRIINDIKS
AVEAACTGIV SCADILAIAA RDSIEKAGGP GYPVPLGRRD SLNFANASVT LANLPPPTSN VTGLIGVLGP KGFNFTDLVA LSGGHTIGIG HCSSFANRLY NTSTGAQQQD PTLEQNFANS
LYTICPTANN TVNSTNLDLR TPNLFDNKYY VDLLNRQTLF TSDQSLYSDS RTRDIVASFA LNQTLFYEKF VLGMLKMAQL NVLTGSQGQI RKNCSVANPT SSYFDASIHS IVDPEDSSYS
SM
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Retrieve as FASTA
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| Remarks |
Complete sequence from genomic and RNA seq (gba_locus_56719_iso_1_len_1258_ver_2) |
CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCGAAGT ATGTCATTAC TCTCGCTGCT ATGTTTTTCT GTGTGTTCGT AGTAGCCTCT GCCAATGCGT TTTCTGCAAA GGATGTGAAT GCTCTGCCGC CTCCCGTTCA AGGCCTTTCA
TGGACTTTCT ACAATCAAAG TTGTCCAAAT TTGGAATCAA TAGTGAAGGC GCGTATTGAT TTTTATTTGA ATCAAGATAT CACTCAAGCA GCAGGCTTGC TGAGACTGCA CTTCCATGAC
TGCTTCGTGC AGGGTTGCGA CGCGTCCGTC TTACTAAATG CGACATCTAG CGAGCAGGTT GCTCCCCCAA ATCTCACTCT GAGAGCCATG GCATTCAGGA TTATCAATGA TATAAAATCC
GCAGTCGAGG CCGCATGCAC TGGAATCGTG TCCTGCGCTG ACATCTTGGC GATAGCTGCT CGTGACTCCA TAGAAAAGGC GGGGGGACCG GGGTATCCAG TACCGCTAGG CCGCAGAGAC
AGCCTCAACT TTGCGAATGC GTCAGTTACC CTTGCCAATT TGCCTCCGCC GACCTCAAAT GTGACGGGAC TTATCGGAGT TTTGGGTCCC AAAGGCTTCA ATTTTACAGA CCTGGTGGCG
CTCTCAGGTG GACACACAAT TGGCATTGGT CACTGCAGCT CCTTCGCCAA CAGACTCTAC AACACCTCTA CAGGCGCCCA ACAGCAAGAT CCGACTTTAG AGCAGAATTT TGCTAACAGT
CTTTATACGA TATGCCCGAC GGCTAATAAC ACCGTCAACA GCACCAACTT GGATCTCCGC ACGCCCAACC TTTTCGACAA CAAGTACTAC GTCGATCTCC TGAATAGACA AACTCTTTTC
ACCTCCGATC AGAGTCTCTA CTCAGACTCC CGTACTCGAG ACATTGTTGC GAGCTTTGCA CTCAACCAGA CGTTGTTCTA CGAAAAGTTT GTTTTGGGGA TGCTGAAGAT GGCTCAACTT
AATGTCTTGA CGGGCAGCCA GGGACAGATC CGCAAGAACT GCTCAGTTGC CAATCCGACC TCTTCATACT TCGATGCATC TATCCACTCG ATCGTCGATC CAGAGGATTC ATCATACTCC
TCTATGTGA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GAAGAATCTG GGTATTTGGC TTAATCAAAG CAAAGGGAGC AGGGGGACGG ATCTGTAACA GGCAGAAACA ATGGCGAAGT ATGTCATTAC TCTCGCTGCT ATGTTTTTCT GTGTGTTCGT
AGTAGCCTCT GCCAATGCGT TTTCTGCAAA GGATGTGAAT GCTCTGCCGC CTCCCGTTCA AGGCCTTTCA TGGACTTTCT ACAATCAAAG TTGTCCAAAT TTGGAATCAA TAGTGAAGGC
GCGTATTGAT TTTTATTTGA ATCAAGATAT CACTCAAGCA GCAGGCTTGC TGAGACTGCA CTTCCATGAC TGCTTCGTGC AGGGTTGCGA CGCGTCCGTC TTACTAAATG CGACATCTAG
CGAGCAGGTT GCTCCCCCAA ATCTCACTCT GAGAGCCATG GCATTCAGGA TTATCAATGA TATAAAATCC GCAGTCGAGG CCGCATGCAC TGGAATCGTG TCCTGCGCTG ACATCTTGGC
GATAGCTGCT CGTGACTCCA TAGAAAAGGC GGGGGGACCG GGGTATCCAG TACCGCTAGG CCGCAGAGAC AGCCTCAACT TTGCGAATGC GTCAGTTACC CTTGCCAATT TGCCTCCGCC
GACCTCAAAT GTGACGGGAC TTATCGGAGT TTTGGGTCCC AAAGGCTTCA ATTTTACAGA CCTGGTGGCG CTCTCAGGTG GACACACAAT TGGCATTGGT CACTGCAGCT CCTTCGCCAA
CAGACTCTAC AACACCTCTA CAGGCGCCCA ACAGCAAGAT CCGACTTTAG AGCAGAATTT TGCTAACAGT CTTTATACGA TATGCCCGAC GGCTAATAAC ACCGTCAACA GCACCAACTT
GGATCTCCGC ACGCCCAACC TTTTCGACAA CAAGTACTAC GTCGATCTCC TGAATAGACA AACTCTTTTC ACCTCCGATC AGAGTCTCTA CTCAGACTCC CGTACTCGAG ACATTGTTGC
GAGCTTTGCA CTCAACCAGA CGTTGTTCTA CGAAAAGTTT GTTTTGGGGA TGCTGAAGAT GGCTCAACTT AATGTCTTGA CGGGCAGCCA GGGACAGATC CGCAAGAACT GCTCAGTTGC
CAATCCGACC TCTTCATACT TCGATGCATC TATCCACTCG ATCGTCGATC CAGAGGATTC ATCATACTCC TCTATGTGAT ATTTTCCTAC TCCGTGTGAT ATTTTATTAC TATATTATCA
GTCTACTACT AGAAAGACTG CATAAACACA TTATAAAATA TCACACGGAG TAGGAAAA
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Retrieve as FASTA
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