Sequence Properties
first value : protein
second value (mature protein)
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Length (aa):  |
328 (304) |
| PWM (Da): |
34661.78 (31988.5) |
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| PI (pH):
| 4.56 (4.43) |
Peptide Signal:
| cut: 25 range:25-328 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MAFRFACCFV GVIWIVLIGC TTNAQLTSNF YQNTCPNVIS IVNQTIQQAL QSDSRIAASL LRLHFHDCFV NGCDGSVLLN DTTNFTGEQT AAPNINSLRG FGVVDNIKSA VESACNGTVS
CADLLAIAAA QSVMLSGGPS WTVLLGRRDS TTANLTTANS AIPAPTDNLT TIINKFSNVG LSVTDVVALS GAHTFGRARC TVFSARLYNF SGTGNPDPTL NSTYLSTLQT TCPQNGNGNT
TTPLDPTTQD TFDSNYFTNL QSNMGLLQSD QELFSTSGAS TISIVNDYAG SQTDFFTNFS NSMINMGNIS PLTGTSGEIR LNCGKVNG*
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Retrieve as FASTA
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| Remarks |
Complete sequence from genomic and RNA seq. (gba_locus_62655_iso_1_len_836_ver_2, 5'end is missing, and gba_locus_67582_iso_1_len_338_ver_2, exon 1). No EST found. |
CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCATTTA GATTTGCTTG TTGCTTCGTA GGAGTTATTT GGATTGTGTT GATAGGATGC ACTACCAACG CTCAGCTAAC TTCTAATTTT TACCAGAATA CATGCCCCAA TGTAATCAGT
ATAGTGAACC AGACTATTCA GCAAGCTCTG CAGAGTGATT CCAGGATAGC GGCGTCACTT CTTCGTCTCC ATTTTCACGA CTGCTTTGTG AACGGATGCG ACGGATCGGT TCTTCTTAAT
GACACAACCA ACTTTACAGG CGAGCAGACT GCAGCTCCGA ACATCAATTC TTTGAGAGGC TTCGGCGTGG TGGACAACAT TAAGTCTGCG GTGGAGAGTG CGTGCAACGG AACAGTTTCA
TGTGCCGACC TTCTAGCAAT TGCCGCAGCC CAGTCAGTAA TGTTGTCCGG CGGCCCATCA TGGACTGTAC TGCTCGGAAG AAGGGACAGC ACTACTGCTA ATTTAACTAC TGCAAACTCA
GCCATACCTG CACCGACCGA TAATCTTACG ACAATCATAA ACAAGTTCTC CAATGTCGGA CTCTCTGTTA CGGACGTTGT TGCTTTGTCA GGAGCGCACA CATTCGGGCG AGCTCGGTGC
ACAGTATTCA GCGCTCGGCT TTACAATTTC AGCGGAACCG GCAATCCAGA TCCCACGCTT AATTCCACTT ATCTCTCCAC CTTGCAAACC ACGTGTCCTC AGAATGGAAA CGGGAACACG
ACAACTCCGC TTGATCCAAC AACTCAAGAC ACTTTTGACA GTAATTACTT CACAAACCTT CAAAGTAACA TGGGGCTTCT TCAGTCGGAC CAGGAATTGT TTTCCACTAG CGGAGCAAGC
ACAATATCAA TTGTAAACGA TTACGCTGGT AGCCAGACTG ATTTTTTTAC CAATTTCTCC AACTCTATGA TCAACATGGG TAACATAAGT CCTTTGACTG GAACCAGCGG AGAAATTCGC
CTCAATTGTG GGAAGGTTAA CGGGTGA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCATTTA GATTTGCTTG TTGCTTCGTA GGAGTTATTT GGATTGTGTT GATAGGATGC ACTACCAACG CTCAGCTAAC TTCTAATTTT TACCAGAATA CATGCCCCAA TGTAATCAGT
ATAGTGAACC AGACTATTCA GCAAGCTCTG CAGAGTGATT CCAGGATAGC GGCGTCACTT CTTCGTCTCC ATTTTCACGA CTGCTTTGTG AACGGATGCG ACGGATCGGT TCTTCTTAAT
GACACAACCA ACTTTACAGG CGAGCAGACT GCAGCTCCGA ACATCAATTC TTTGAGAGGC TTCGGCGTGG TGGACAACAT TAAGTCTGCG GTGGAGAGTG CGTGCAACGG AACAGTTTCA
TGTGCCGACC TTCTAGCAAT TGCCGCAGCC CAGTCAGTAA TGTTGTCCGG CGGCCCATCA TGGACTGTAC TGCTCGGAAG AAGGGACAGC ACTACTGCTA ATTTAACTAC TGCAAACTCA
GCCATACCTG CACCGACCGA TAATCTTACG ACAATCATAA ACAAGTTCTC CAATGTCGGA CTCTCTGTTA CGGACGTTGT TGCTTTGTCA GGAGCGCACA CATTCGGGCG AGCTCGGTGC
ACAGTATTCA GCGCTCGGCT TTACAATTTC AGCGGAACCG GCAATCCAGA TCCCACGCTT AATTCCACTT ATCTCTCCAC CTTGCAAACC ACGTGTCCTC AGAATGGAAA CGGGAACACG
ACAACTCCGC TTGATCCAAC AACTCAAGAC ACTTTTGACA GTAATTACTT CACAAACCTT CAAAGTAACA TGGGGCTTCT TCAGTCGGAC CAGGAATTGT TTTCCACTAG CGGAGCAAGC
ACAATATCAA TTGTAAACGA TTACGCTGGT AGCCAGACTG ATTTTTTTAC CAATTTCTCC AACTCTATGA TCAACATGGG TAACATAAGT CCTTTGACTG GAACCAGCGG AGAAATTCGC
CTCAATTGTG GGAAGGTTAA CGGGTGAACT GAAGTCTTTA TCATAATCTA CTGGCGTGAC ATGTAAAATC TTCTCAAGAG CGACAGGGAA GGCCAAATGA TG
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Retrieve as FASTA
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