Entry information : SpolAPx01 (Spipo0G0122600 [2.0])
Entry ID 13191
Creation 2015-05-28 (Christophe Dunand)
Last sequence changes 2015-05-28 (Christophe Dunand)
Sequence status complete
Reviewer Catherine Mathe
Last annotation changes 2016-02-26 (Catherine Mathe)
Peroxidase information: SpolAPx01 (Spipo0G0122600 [2.0])
Name (synonym) SpolAPx01 (Spipo0G0122600 [2.0])
Class Ascorbate peroxidase    [Orthogroup: APx003]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Araceae Spirodela
Organism Spirodela polyrhiza (great duckweed)    [TaxId: 29656 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SpolAPx01
start..stop
S start..stop
EgAPx04 493 7e-179 1..287 1..288
ZaAPx02 490 9e-178 1..287 1..286
BnAPx03-1Aa_other 478 8e-173 1..287 1..285
AcAPx04 477 1e-172 1..288 1..288
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 8425268..8425380 113 N° 2 8426536..8426660 125 N° 3 8427517..8427566 50 N° 4 8428032..8428097 66
N° 5 8428179..8428227 49 N° 6 8428379..8428461 83 N° 7 8428553..8428632 80 N° 8 8428734..8428836 103
N° 9 8428981..8429178 198  
join(8425268..8425380,8426536..8426660,8427517..8427566,8428032..8428097,8428179 ..8428227,8428379..8428461,8428553..8428632,8428734..8428836,8428981..8429178)


exon

Literature and cross-references SpolAPx01 (Spipo0G0122600 [2.0])
DNA ref. Phytozome 12:   pseudo0 (8425267..8429177)
Cluster/Prediction ref. Phytozome Gene 12:   31508030
Protein sequence: SpolAPx01 (Spipo0G0122600 [2.0])
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   289
PWM (Da):   %s   31417.16 Transmb domain:   %s   o260-282i
PI (pH):   %s   7.02
Sequence 330
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAAPVVDAAYLKEIDKARRELRALIASKNCAPIMLRLAWHDAGTYDVNTKTGGPNGSIRHEEEYKHGANAGLKIAIDLCETVKVKHPRITYADLYQLAGVVAVEITGGPTVDFVPGRRDSSVCPREGRLPDAKQGAAHLRDIFYRMGLSDKDIVALSGGHTLGKAHPERSGFDGPWTREPLKFDNSYFVELVHGDDEGLLKLPTDKALMEDSEFARYVRLYAKDEDAFFKDYAESHKKLSELGFTPRASSGKSDAAATSVVLAQSAVGVAAAAAVVILSYLYEVSRRK*

Retrieve as FASTA  
Remarks Comlpete sequence from genomic (8 introns).
Promoter
Send to BLAST
Send to cis Analysis
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GAAAACTTCC CTGGTTGGTC AGCACTAGAT GAACTCCTTC TTTCTACTGA GAGAGAGAGA GAGAGAGAGA GCACGCTCCC TGCTAGACTG TAGAGCTAAT CCCGCCGAAG AATGGCCCAG  GTAGGTTTTC TTCTACGGTG GAAAATTCCG GAGATGAGAA TGACTTGAAA GGAGCCGTAA GCAGCCAGCC TGTCATTCAC ATGCTTTCCA GAGGGTTGGA GCGTAAACAA AAAACCCGTC  GTTTTTTGCG GGCCTAGAGG CCGCGTTCCT CTAGAAGGAT GACCTTCATT TCCGATTAGA TTTGTATCTC GTGCATGTCG ATAGATGACA GTTCCCACTT TCTTCAAAGC CCGAAGAAAA  ACTTGGTTCC CAATGGTGGA CTTCTAGCGA GAGAGGCAGA GAGGGATAGG AATCAAGTTG CTCCGGGGGG CCGACGGTCT TAAACATGTT TTGATTTAGA GTGAGAAGAG AGACTTCGGC  CACTTACTGG AGCTCAATGA CAAGAGCAAC GTGTGGATCC GATAGCCATA AAGATTTTTG GGGAGGGAAA GAGAGAGAGA GAGAGAGATG GAACTCTTCT TAGAACTCCA CGACAAGATC  AAGAGAGCCA CATTACCACG ATCATCTTTA GATAGATAGA TAGATAGATA GCGAGAGAGG AGGGGGGGGG AGGGAGAGAG AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG AGAGAGAGAn  nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnC CCACTCTCTC TCTCTCTCTC  TCTCTCTCTC TCAACCAGTC ACTTCTGCTC GATGAAGAAA GATGAAGCAA ACCCTTCCTT CCTCCTGCTC AAGCTCGCTC CCCACCACCG CTGCCTCTCC GATTCCTCGC AGCAGGGAGA  ACCCTCCTCC TCCCTTCTCT CCCAACAACG CCCATTCCCT TCCTCAATCT CTCTCTCTCT CTCTATCTTG CTCCCTTTCT CTCTCTGAAC TGGGGCGCTC GCTGGAGCTC TCTCAAGGGC  GCTCTGAGAG GGGGGAGAGG AAACAGTTCT GAGGTGCGCT ACCAGCACGG CTGGTGTCGG GCAGAGAGCT CATATATTTG TCGCCTAGCG AAGGCGCACC AGTCCCCCAT GCCATAAATG  ACCAAAAAAC CCCTCATCCG CCTATTAATA TCAGTCGGGC CCGATCCGGA CCTAGACGCT TCAGTACCTC CAATATCGAG GAGAGAACAG GGGTGTTTTC GTCCTCACAT CACATTCCAA  CGGTAGCCTG ACGCGGAGTA GCGCATACGT GGCGGACCTT AAGTCGCCAC TTCCCTGACG TGCCCCTGTT CAGCATTTCG TGAGACCAAA GGGGTAGTTA TGGCATTTCC CAGTGAGTCA  GAGCGCTCCT CGTCTTTTCT GGGGAAACGC GCCAGTGGAA GCAGCAGGGA GCATTTTAGG AACTCTCTCT CTCTCTCTCT CCTGCCTGCG CCTTGGAGTT TTTTGAAATC TCGGGTGGCC  GTTGAAGGGC GAATTTTGAA TAAAAGCCCA AAAATATTAT TTAATTGTCA AAAAACCTCT GATAAATTAC TATTAGTAAG ATACTGTACA ACGCGGGATT TCGGCCGGCG CGGGAGACGA  CACGGCGGGG GATGACGTCA CCGAGAGTCT AGAAGGTAAC CGGCAGCAGG TGAGTAAAGA TCGTCCTCGA TCTGCGCCAT ACGAATCGCA CGGTTCAGGT GAGGCGTCCA AGGTGGAATC  TCTGGTTTGG ACGGCTTTGA TCTCATCGAG GGTCGAGCCT TCGAGATGCA TCGTGGGTCG TTAGATCCGA ACCAATGGGG AAGTGCCACG TGCTAGTTCA TCGCGATAGA TATGCTCCGA  CCACTACGCT CCCTCTCGCC CTATCTCTTC CATTGGGCTC GGTGTTCACA AGCAGCAGCG GTTCGAGGGT GCTCAGTCCC ATGGCGGCCC CGGTGGTGGA CGCGGCGTAC CTCAAGGAGA  TCGACAAGGC CCGCAGGGAG CTCCGCGCCC TCATCGCAAG CAAGAACTGT GCCCCGATCA TGTTGCGCCT CGCGTGAGTG TGCAATTTCG TTTTGCGCTT CTCTTCGTGT CTTCTGCTTG  TGTGTATTCT TTTCCCCTTA GCGGATGCAG ATTTGGGGCA TTCACTCGCT GTGTTTTGCG CTTCCAATTG TTTTCTCCTG CCCTTCTTTG CTGAATCAGT CGGATATCCG CCTGTTGAAA  TACTGTCGAC AGTCCGTGTC GAGTTCCATC ACTTGATTTT ATTCTCCCTA TTGCGATATA TTTTTTAGCT CTCCGTCAGT CTCTTTCCAT GAGTTCTTTA TGCCTTATGC TCCGTCTCGT  GGTTATGTTC GTGGAATCGC TGGTTGCGCC CTGAGAGAAT TCTATTCGTT TCTCCTGCTT CTATTGCTAG AATACTCGGT TTCATTGTTC TTTTGCTGCG AGAAGGAACG GGGAATATGA  TGATTTCAAT CCATGGTTGT TAATTTTTCT CCGGCGTCAT ACAATGCTGA TAGAGTTCGA AGGACAGCTT ACTGCATTAC AGAATTGTTG GTCCCAGTTT TATTTGTTTG ATCGATCTCT  TGTCGTGTTG CCTGGAGAGG AGTTCCCAAC TGAGAAGTAT TCTCTACGCT TTCGTGTTGT TAGCATCATT GCTGACTTCG TCTCTAAACT ATGAAATCCT TTGCCGAAGT TATATATTTT  GCCTGGCATG ATCTCTCCAT AATCAGTAGT GGTTTGAATT CTCTGTTCTC TGCACTTATC ACCAAGCTGA TGATTGTATT GTCTCTAAGT TAAGTCTCCT CTTTCGTGCT GTTTATCATT  CAGAAACATC TTTTTTTGTC AATTATGGCC GCCTTGGAAA GGATTAGCTC TTGGACGACA TCTGGTTTAG GTTTGATGAT GATGATGGGT ATGCTTGGCA TTATATGGTT AGTTGTTGTT  GATTGAGAGG ATTGGTGGTT GTGGGCATTC TAAATTCCTC TACTAGTATT AGGTACAAGT ATTTGGTTCC TGTGTTCATG TTACAGTTTT CTATATTTTC GAACTGAAAT TTCAGACGTA  AGCACTACAA TTAAGATACT TGTAAATTTC ATTTTTCCAT TACTACATTT TTTATTTTTC AAGCTTTTTG TGTTATATTT CTTCACGTAT TGAAACTATT TTTTTCCACC TCAATCCAGC  ATTCGTTTAT ACTATTTTTC CATTGCAGCT GGCATGACGC TGGTACTTAT GATGTGAACA CAAAGACAGG TGGTCCAAAT GGTTCCATAA GGCACGAGGA AGAGTACAAA CATGGTGCAA  ATGCTGGATT AAAGATAGCT ATAGACCTAT GTGGTGAGCT AGTATCCATA TTTATCAACT CATGGATCGT TTTAAACTAT ACCTTCTAGT GATTCAGTGC ATTATCCTTC TCTGCCGTAT  CATATTCAGT GTTTGTCTCC AGCTTGTCAA AGAAAATTTA AGATAAATTA TTTTTATGAT TATTTTTTGC CATTTCCGGT TTTTTTTTAT GGCTTTGCTT TCGTGAAAAT TCATCGGTGG  ATTTAGAATT TCTGCCATGG GCTATGGCTG GCTGAAGCTT CTATACCATT TTTGTGTCGA TTTATGTCGG GATTTTGGAA TTTAAGGGAC AGATGAGGAG ACCTCTTACT TATTTGATCA  TATTGTAATT GGAAACGTTA AAAAGGAAGA TACTAGGATG TAGACAGCAC AATTTATAAT CTTGAGGCAC ATGCTGTTGC TACATGTGCC TCAAGATTAC ACAGATCAGA TATATTGTGT  ACGTTTCTTT TTGCCCTGCT CTTTGGTGAT ACTGATTCTA TTCGACTCCT CGTTCCTTCA CTTCATGGTT TTCTTTTAAT GTCCTTGTCT CCTTTGCAAC TGTCTGTACT CTTTGCAGAC  AAACTTCCTT ATTACAAGTA ATCTAAAGGA CCAATTCGCG TAAATATTTT ATATTTTCGG CATTTTGTTT TAGAATAGAT GGTGCCAATT ACTGTATATC TTTGTAAGGT TATATTGTTC  TCCTAATTCG TTCTTCTAAT TGCTCATTGA AATGCTTTAA GCTATTGCTT TCTAATGACG TTCTTGAACC CTTCAAAGCA GGGAACGTTG TAGGTTGTTA CTGTAGTAGA CTAAGTCGTG  TCTTAGATTA TCCGATTTCT GACGTGCTCC TTTTCTCCCC TGTTACCAGA GACTGTGAAG GTTAAACATC CAAGGATAAC ATATGCGGAC CTTTATCAGG TGATGATTTA ATTGGGCATT  TTCAATTATT TTCCCTGTTG TAAATACCTT TTGTATGAAT TAAGTTTTTA AATTTTGCTG CTCCAACTTT TCTGTCGGAC CACGAAAGGG GGTGGATAGT TGCCCTATTT ATAAAGCATA  GATGTTAGAA GAACTCCAAC CTTGTCTCTT TCTTTTTTCT GTACACATTA ATGCCATTAA TAAGCTCCGG AGGAGCATGT AGTCTTGCTG ACCACTTTGA GGGGTCCATA TGTGTACGCA  CAGAAGACTG CCATTCTTCT GAGTGCACAA TTCCATCAGA ACAATAAACA GTGGTCTACT TTAAGAGTTC TGAAATCGAT TGAATCTATG ACTTTATTTA TTTTAGTTTT GCATGTATTG  CTGTCATTAA TAAACTGCTT TATAATTCTA TTTCGCGAGA TGGTTGCTTT AATATAACCT AATTAAAATG GATTGGTATA CCAGCTTGCT GGAGTTGTCG CAGTCGAGAT TACAGGAGGA  CCAACCGTTG ACTTTGTACC TGGCCGAAGG GTAGGAAACG CCATTTTCCT TCAACCAGTC GGCGTTTCCG GCGATTAAGT ATGCTGATGT TTGGTTCCTT TTGCCTATCA GGATTCCTCT  GTCTGCCCTA GAGAAGGGCG TCTCCCTGAT GCCAAACAAG GTTTCCTTCC ACACCCATCT TCTTCACCGT CACAACGGAT TTTTCATTAT GATCTATATA TAGGAGATTA ATTTAACTGG  GCAGGATTCA GGGAGTTTGC TTTATCCATG GTTGACTTAC ACAGTCTTGA ACTCGTCCCT GGGTATTATA GGTGCTGCGC ATCTGAGGGA TATCTTTTAT AGGATGGGGC TGTCTGACAA  GGACATCGTG GCTCTGTCCG GCGGTCACAC TCTGGTAGTA GCAAACTTTT TGAATCTTTC ACTCGTTGAG ACTGGCGCCG GGTGTTGATG GACTCGCGCC GGTGCCTTGT GTTTCGCTTC  AACAGGGGAA GGCGCACCCG GAGAGGTCCG GCTTCGACGG TCCGTGGACC AGGGAGCCTC TGAAGTTTGA CAACTCCTAC TTCGTGTAAG ATTTGTAGTC ATCGCACAGC TTCGTTGACT  CTCCTGGGCC TCTGCCAGAA GAGGAAAAGA GACTCTCTGA GTTTGGATTT TTGGCTCTTG TTCCAGGGAG CTGGTCCATG GAGACGACGA GGGCCTTCTC AAGCTTCCCA CCGACAAGGC  CTTGATGGAG GACTCTGAAT TCGCCCGTTA TGTTCGCCTG TACGCCAAGG TATTGAGCTC GAGCGCTCCC TGAAAACACT CCGATTCCAA TCAGTCCCAA CCCAATCCCG ATCTTCCTCT  CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT AAAGTAGAAA GATGATGCAT CCGTTTTGGG CAGGACGAGG ACGCCTTCTT CAAGGACTAC GCGGAGTCGC ACAAGAAGCT  CTCCGAGCTG GGGTTCACTC CGAGGGCGTC GTCCGGCAAG TCGGACGCCG CCGCGACCAG CGTGGTGCTG GCTCAGAGCG CGGTGGGTGT CGCCGCCGCC GCCGCCGTCG TCATTCTGAG 
CTACCTCTAC GAGGTCTCCC GGAGGAAGTG A 

Retrieve as FASTA  
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TGGCGGCCCCGGTGGTGGACGCGGCGTACCTCAAGGAGATCGACAAGGCCCGCAGGGAGCTCCGCGCCCTCATCGCAAGCAAGAACTGTGCCCCGATCATGTTGCGCCTCGCGTGAGTGT
GCAATTTCGTTTTGCGCTTCTCTTCGTGTCTTCTGCTTGTGTGTATTCTTTTCCCCTTAGCGGATGCAGATTTGGGGCATTCACTCGCTGTGTTTTGCGCTTCCAATTGTTTTCTCCTGC
CCTTCTTTGCTGAATCAGTCGGATATCCGCCTGTTGAAATACTGTCGACAGTCCGTGTCGAGTTCCATCACTTGATTTTATTCTCCCTATTGCGATATATTTTTTAGCTCTCCGTCAGTC
TCTTTCCATGAGTTCTTTATGCCTTATGCTCCGTCTCGTGGTTATGTTCGTGGAATCGCTGGTTGCGCCCTGAGAGAATTCTATTCGTTTCTCCTGCTTCTATTGCTAGAATACTCGGTT
TCATTGTTCTTTTGCTGCGAGAAGGAACGGGGAATATGATGATTTCAATCCATGGTTGTTAATTTTTCTCCGGCGTCATACAATGCTGATAGAGTTCGAAGGACAGCTTACTGCATTACA
GAATTGTTGGTCCCAGTTTTATTTGTTTGATCGATCTCTTGTCGTGTTGCCTGGAGAGGAGTTCCCAACTGAGAAGTATTCTCTACGCTTTCGTGTTGTTAGCATCATTGCTGACTTCGT
CTCTAAACTATGAAATCCTTTGCCGAAGTTATATATTTTGCCTGGCATGATCTCTCCATAATCAGTAGTGGTTTGAATTCTCTGTTCTCTGCACTTATCACCAAGCTGATGATTGTATTG
TCTCTAAGTTAAGTCTCCTCTTTCGTGCTGTTTATCATTCAGAAACATCTTTTTTTGTCAATTATGGCCGCCTTGGAAAGGATTAGCTCTTGGACGACATCTGGTTTAGGTTTGATGATG
ATGATGGGTATGCTTGGCATTATATGGTTAGTTGTTGTTGATTGAGAGGATTGGTGGTTGTGGGCATTCTAAATTCCTCTACTAGTATTAGGTACAAGTATTTGGTTCCTGTGTTCATGT
TACAGTTTTCTATATTTTCGAACTGAAATTTCAGACGTAAGCACTACAATTAAGATACTTGTAAATTTCATTTTTCCATTACTACATTTTTTATTTTTCAAGCTTTTTGTGTTATATTTC
TTCACGTATTGAAACTATTTTTTTCCACCTCAATCCAGCATTCGTTTATACTATTTTTCCATTGCAGCTGGCATGACGCTGGTACTTATGATGTGAACACAAAGACAGGTGGTCCAAATG
GTTCCATAAGGCACGAGGAAGAGTACAAACATGGTGCAAATGCTGGATTAAAGATAGCTATAGACCTATGTG
GTGAGCTAGTATCCATATTTATCAACTCATGGATCGTTTTAAACTATA
CCTTCTAGTGATTCAGTGCATTATCCTTCTCTGCCGTATCATATTCAGTGTTTGTCTCCAGCTTGTCAAAGAAAATTTAAGATAAATTATTTTTATGATTATTTTTTGCCATTTCCGGTT
TTTTTTTATGGCTTTGCTTTCGTGAAAATTCATCGGTGGATTTAGAATTTCTGCCATGGGCTATGGCTGGCTGAAGCTTCTATACCATTTTTGTGTCGATTTATGTCGGGATTTTGGAAT
TTAAGGGACAGATGAGGAGACCTCTTACTTATTTGATCATATTGTAATTGGAAACGTTAAAAAGGAAGATACTAGGATGTAGACAGCACAATTTATAATCTTGAGGCACATGCTGTTGCT
ACATGTGCCTCAAGATTACACAGATCAGATATATTGTGTACGTTTCTTTTTGCCCTGCTCTTTGGTGATACTGATTCTATTCGACTCCTCGTTCCTTCACTTCATGGTTTTCTTTTAATG
TCCTTGTCTCCTTTGCAACTGTCTGTACTCTTTGCAGACAAACTTCCTTATTACAAGTAATCTAAAGGACCAATTCGCGTAAATATTTTATATTTTCGGCATTTTGTTTTAGAATAGATG
GTGCCAATTACTGTATATCTTTGTAAGGTTATATTGTTCTCCTAATTCGTTCTTCTAATTGCTCATTGAAATGCTTTAAGCTATTGCTTTCTAATGACGTTCTTGAACCCTTCAAAGCAG
GGAACGTTGTAGGTTGTTACTGTAGTAGACTAAGTCGTGTCTTAGATTATCCGATTTCTGACGTGCTCCTTTTCTCCCCTGTTACCAGAGACTGTGAAGGTTAAACATCCAAGGATAACA
TATGCGGACCTTTATCAG
GTGATGATTTAATTGGGCATTTTCAATTATTTTCCCTGTTGTAAATACCTTTTGTATGAATTAAGTTTTTAAATTTTGCTGCTCCAACTTTTCTGTCGGACC
ACGAAAGGGGGTGGATAGTTGCCCTATTTATAAAGCATAGATGTTAGAAGAACTCCAACCTTGTCTCTTTCTTTTTTCTGTACACATTAATGCCATTAATAAGCTCCGGAGGAGCATGTA
GTCTTGCTGACCACTTTGAGGGGTCCATATGTGTACGCACAGAAGACTGCCATTCTTCTGAGTGCACAATTCCATCAGAACAATAAACAGTGGTCTACTTTAAGAGTTCTGAAATCGATT
GAATCTATGACTTTATTTATTTTAGTTTTGCATGTATTGCTGTCATTAATAAACTGCTTTATAATTCTATTTCGCGAGATGGTTGCTTTAATATAACCTAATTAAAATGGATTGGTATAC
CAGCTTGCTGGAGTTGTCGCAGTCGAGATTACAGGAGGACCAACCGTTGACTTTGTACCTGGCCGAAGGGTAGGAAACGCCATTTTCCTTCAACCAGTCGGCGTTTCCGGCGATTAAGTA
TGCTGATGTTTGGTTCCTTTTGCCTATCAGGATTCCTCTGTCTGCCCTAGAGAAGGGCGTCTCCCTGATGCCAAACAAGGTTTCCTTCCACACCCATCTTCTTCACCGTCACAACGGATT
TTTCATTATGATCTATATATAGGAGATTAATTTAACTGGGCAGGATTCAGGGAGTTTGCTTTATCCATGGTTGACTTACACAGTCTTGAACTCGTCCCTGGGTATTATAGGTGCTGCGCA
TCTGAGGGATATCTTTTATAGGATGGGGCTGTCTGACAAGGACATCGTGGCTCTGTCCGGCGGTCACACTCTG
GTAGTAGCAAACTTTTTGAATCTTTCACTCGTTGAGACTGGCGCCGG
GTGTTGATGGACTCGCGCCGGTGCCTTGTGTTTCGCTTCAACAGGGGAAGGCGCACCCGGAGAGGTCCGGCTTCGACGGTCCGTGGACCAGGGAGCCTCTGAAGTTTGACAACTCCTACT
TCGT
GTAAGATTTGTAGTCATCGCACAGCTTCGTTGACTCTCCTGGGCCTCTGCCAGAAGAGGAAAAGAGACTCTCTGAGTTTGGATTTTTGGCTCTTGTTCCAGGGAGCTGGTCCATGG
AGACGACGAGGGCCTTCTCAAGCTTCCCACCGACAAGGCCTTGATGGAGGACTCTGAATTCGCCCGTTATGTTCGCCTGTACGCCAAG
GTATTGAGCTCGAGCGCTCCCTGAAAACACTC
CGATTCCAATCAGTCCCAACCCAATCCCGATCTTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAAAGTAGAAAGATGATGCATCCGTTTTGGGCAGGACGAGGA
CGCCTTCTTCAAGGACTACGCGGAGTCGCACAAGAAGCTCTCCGAGCTGGGGTTCACTCCGAGGGCGTCGTCCGGCAAGTCGGACGCCGCCGCGACCAGCGTGGTGCTGGCTCAGAGCGC
GGTGGGTGTCGCCGCCGCCGCCGCCGTCGTCATTCTGAGCTACCTCTACGAGGTCTCCCGGAGGAAGTGA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TGGCGGCCCCGGTGGTGGACGCGGCGTACCTCAAGGAGATCGACAAGGCCCGCAGGGAGCTCCGCGCCCTCATCGCAAGCAAGAACTGTGCCCCGATCATGTTGCGCCTCGCCTGGCATG
ACGCTGGTACTTATGATGTGAACACAAAGACAGGTGGTCCAAATGGTTCCATAAGGCACGAGGAAGAGTACAAACATGGTGCAAATGCTGGATTAAAGATAGCTATAGACCTATGTG
AGA
CTGTGAAGGTTAAACATCCAAGGATAACATATGCGGACCTTTATCAG
CTTGCTGGAGTTGTCGCAGTCGAGATTACAGGAGGACCAACCGTTGACTTTGTACCTGGCCGAAGGGATTCCT
CTGTCTGCCCTAGAGAAGGGCGTCTCCCTGATGCCAAACAAG
GTGCTGCGCATCTGAGGGATATCTTTTATAGGATGGGGCTGTCTGACAAGGACATCGTGGCTCTGTCCGGCGGTCACA
CTCTG
GGGAAGGCGCACCCGGAGAGGTCCGGCTTCGACGGTCCGTGGACCAGGGAGCCTCTGAAGTTTGACAACTCCTACTTCGTGGAGCTGGTCCATGGAGACGACGAGGGCCTTCTCA
AGCTTCCCACCGACAAGGCCTTGATGGAGGACTCTGAATTCGCCCGTTATGTTCGCCTGTACGCCAAG
GACGAGGACGCCTTCTTCAAGGACTACGCGGAGTCGCACAAGAAGCTCTCCG
AGCTGGGGTTCACTCCGAGGGCGTCGTCCGGCAAGTCGGACGCCGCCGCGACCAGCGTGGTGCTGGCTCAGAGCGCGGTGGGTGTCGCCGCCGCCGCCGCCGTCGTCATTCTGAGCTACC
TCTACGAGGTCTCCCGGAGGAAGTGA

Retrieve as FASTA