Entry information : SpolPrx05 (Spipo1G0078800 [2.0])
Entry ID 13192
Creation 2015-05-28 (Christophe Dunand)
Last sequence changes 2015-05-28 (Christophe Dunand)
Sequence status complete
Reviewer Catherine Mathe
Last annotation changes 2016-02-26 (Catherine Mathe)
Peroxidase information: SpolPrx05 (Spipo1G0078800 [2.0])
Name (synonym) SpolPrx05 (Spipo1G0078800 [2.0])
Class Class III peroxidase    [Orthogroup: Prx021]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Araceae Spirodela
Organism Spirodela polyrhiza (great duckweed)    [TaxId: 29656 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SpolPrx05
start..stop
S start..stop
SpolPrx41 581 0 1..325 1..325
LminPrx19 457 2.09e-163 1..325 1..324
LminPrx46 456 9.46e-163 1..325 1..324
LminPrx17 454 4.73e-162 1..325 1..324
Gene structure Fichier Exons


exon

Literature and cross-references SpolPrx05 (Spipo1G0078800 [2.0])
DNA ref. Phytozome 12:   pseudo1 (4888896..4890243)
Cluster/Prediction ref. Phytozome Gene 12:   31521296
Protein sequence: SpolPrx05 (Spipo1G0078800 [2.0])
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   325 (301)
PWM (Da):   %s   35372 (32563.5) Transmb domain:   %s   o263-285i
PI (pH):   %s   7.31 (7.70) Peptide Signal:   %s   cut: 25 range:25-325
Sequence
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MGFRETGALLLTLILGFWVTQFEAQLQVGFYLSSCPDAEKIVREEVVKALVTHPDLPADLLRLHFHDCFVRGCDGSVLLDSTPGSTAEKDSPINNSLEGYDVVDNAKTRLEAICPGIVSC
ADIVAFAARDSVKLSKGIPYDVPAGRRDGTVSLSSETFTNLPSPTFNLDQLTKNFASKGLTQKDMVILSGAHTIGEARCSSITSRLYNFNSTGRVDPSLDPAYAARLKKKCPPNSVNSNQ
GVDMDPPSPTIIDSSYYRNLLVNRGLFTSDQTLMSSPVTASLVLRNAFNDFLFRRNFAVAMVKMGRVEVLTGANGEIRKKCNVIN*

Retrieve as FASTA  
Remarks Complete sequence from genomic (3 introns).
Promoter
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Send to cis Analysis
DNA
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CDS
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