Entry information : SpolPrx07 (Spipo13G0024100 [2.0] / Peroxidase55)
Entry ID 13194
Creation 2015-05-28 (Christophe Dunand)
Last sequence changes 2015-05-28 (Christophe Dunand)
Sequence status complete
Reviewer Catherine Mathe
Last annotation changes 2016-02-26 (Catherine Mathe)
Peroxidase information: SpolPrx07 (Spipo13G0024100 [2.0] / Peroxidase55)
Name (synonym) SpolPrx07 (Spipo13G0024100 [2.0] / Peroxidase55)
Class Class III peroxidase    [Orthogroup: Prx027]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Araceae Spirodela
Organism Spirodela polyrhiza (great duckweed)    [TaxId: 29656 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SpolPrx07
start..stop
S start..stop
VvPrx65 444 2e-158 1..319 1..322
NnPrx59 429 2e-152 2..319 3..325
IaquPrx45 427 8e-152 1..319 3..329
MePrx64 427 2e-151 1..319 1..323
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1509282..1509491 210 N° 2 1509826..1510017 192 N° 3 1510116..1510673 558  
join(1509282..1509491,1509826..1510017,1510116..1510673)


exon

Literature and cross-references SpolPrx07 (Spipo13G0024100 [2.0] / Peroxidase55)
DNA ref. Phytozome 12:   pseudo13 (1509282..1510673)
Cluster/Prediction ref. Phytozome Gene 12:   31519414
Protein sequence: SpolPrx07 (Spipo13G0024100 [2.0] / Peroxidase55)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   320 (296)
PWM (Da):   %s   34348.45 (31706.1)  
PI (pH):   %s   4.93 (4.90) Peptide Signal:   %s   cut: 24 range:24-319
Sequence 361
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MESWRRLSSLAVLLLMAAGQVESQLRTDFYASTCPDVESIVREEVRKKFVQTFVTVPATLRLFFHDCFVEGCDASVIIASPNGDAEKDADENISLAGDGFDTVIKAKTAVESRCPGVVSCADILALATRDVVVLSGGPSFTVELGRLDGLISQRSRVAGKLPKPDQSLDQLNAIFKQNNLTETDVIILSGAHTLGFAHCGTFSDRLYSNPDPTLNADFARQLQDACPRNVDPLVAINLDVNTPRTFDNVFFSNLVEGKGLLRSDQVLFSDPRSRSKVVEFAGNAAGFGAAFADAMVRLGRVGVKTGSGGEIRRDCAAFN*

Retrieve as FASTA  
Remarks Complete sequence from genomic (introns 1 and 2).
Promoter
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Send to cis Analysis
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
CAAAGAGATG AGCTGGAAGA GAAAACTTGT AGACACAATT TTATAGTAGC TCACTTTCAA TAAGAGAGTT ATATGTTGGC CTAGAATTTC TTATATAATG TTGCAATTAG TGCACAACTT  AACATGATGT AAGATGAAAA TAGAGACTTG AGAGTTTTTT TCCTTATGCT GGGCAAAACA AACTAGATTA TCCATAACTT AAAATTTTAG AGCAGCCAAG ATTGATCTTG GGAATCTTCC  TAATGGTTTA AGTTTAAAGA AAAAGACTAT GAGAGAGAGA GAGAGAGAGA GAGAGAGAGA GAGAGAGAGA GAGAGAGGAT GAGAGATTCT CATTGGCCTT CTGTTGTACC AATTAAAATG  ACAATAAAAC ATTTTTTGGC ATTTTAAATA TAACATTGCC AAGCCTACAT AAATTTGAGG CTACTTTCCT TTTTGTACTC AATATTGAGG TCCACCCATG AAGGAAAGCT AGGTCAAGCA  ACATCTGTGT TTAACTGACC TCTTAACATC CATAAGATAC AAGTCATTAA GTGCGGATGA ACATCCACAC GAATATGAAG TTATCAGCCG TAGATAACAG GAAACGCGGC CACTCGATCC  TTCTGACCTT TTTCTTATCT CATTATTTCC TTCGATGAAA GTCAACACTT CCAGGAGCAA GAGTACCCTC CATGTGCTTG CACACATTAT TTGTTCGAAT TTGGTGGCCA TAATGAATAC  TGATCAGAAA ATAATATTAT CGCTTAGGGT TTGGTTGTCT GTTGATGCCT AGATGGAACT AACAAGATTC TTCTCCATCA TGAACGTCAA TGCCAGAGTT TTGTTGCACC AACTCTCTAC  CATCGTTGAC CGTTGGAGAT AATTAATGTA CTCGGAATTT CTGCAATTCA GTAAGATCTT GGAGTTTCAG GCCTGGCCCT GCCAACCCCG GGCCAAGTGT GAAACCCCTC GCTTCAGAGA  AGCTGGACTG ATATTCGCTT CACGGCAAGG AACGGCTTGC AGTGAACCGC CGCACGGCGG CGGGATCGAG TCCGCGGCAC CAATCGGCGA GGTTCAATAG CACTCGTGAG CGGCGATGTG  CCTGGACGAG TGCAGTGTGA GACAACTCAG CGGCCTACGT CGGCAGGTGT CCGGCACGGC AGCCTGGGGA CCCCGCGGCA CTTCGCAGAG AACTCAGCGT GAAGAAGACC CGGCGCAGCT  GCGCAACCTG CAGGGCGGAC ACAGCGGATT CGGCCTGCGG GGGGTGCACA TGGGTTGGTG AGATTTGGCC GCCTACTAGG TGACGTTCTA GAAGGGTGGC TCTGGTGAGA GTTACGGGAG  CCCTGCAGTT GGGATGTCTG CACAGGGCGA TGAACCCTAG AGCTTGCTCT CTCTCCCATT ACTGGAGGTC AATGGTGAAG GCTTCCCCTC GGCATGGCCG GGTGCTTCTA GCACTGCTTG  GGATTGGCAG AGCAATGTTG AGGCCAGCAC GCGCCAACGC TCTGGAAAAT GAAATTCTGG AACCCTGATA AAACCTGATT CGGCTCAGAT TCGGCCTGCG ATCCTAGAGT AATAGTTTGC  GTGTGAGCGC ACGTCAGAGA TTACCGAAGT CTTCACCATC CTGGGACGGT TCATCTGAGG CTCGACAAGG TTTTCTTGCA AATATTATAA CAAAGCGAGA GAGAGACAGA GGATGACAAA  TGGACTGGGA GGAGTCCAAA TTCAAGCTGT GGAAGGTGAT CCGTCAGCAT CCAAGAAAAT ACCCATCTGG CCTTTTTTTG ATTGGGGTAC TTGGCAGTTC TTGCCAAATT TCCATCGTAG  GTCAACAACG CGGGTCGGGA TGCCGAGTCG CATGTGCCAT GGGTGTCCGC GGGGATGGAC GAGGTCAATG GCATTGCACC CATAAAGCCT CCGAAGCCCC ATCGTAGAGC AAGTCCCTGG  CTTCTCTCTC TCTCTCTATC ATTTCCGGTC CCCCTTCTCT TTCTCTCTCG GTGCTGAATA CGAGCTCGAG TGTTGGGGAG ATGGAGTCAT GGAGGAGACT ATCGTCTCTG GCTGTACTGC  TGCTGATGGC TGCCGGGCAA GTAGAATCCC AGCTGAGGAC TGACTTCTAC GCCTCGACCT GCCCCGACGT TGAGTCCATC GTGAGAGAGG AGGTGAGGAA GAAGTTCGTC CAGACCTTCG  TCACCGTCCC GGCCACGCTG AGGCTTTTCT TCCACGACTG CTTCGTCGAG GTACGCTTCG ACAATCTACA CATCCCGTAG GACATCGCTG CTGTTGGGGT GCAAGCCCAC GAAGATAATA  GATATATTTT CCTTGTGAGA GCGTGTGTGT GTGTGTGTGT GTGTGAGAGA GAGAGAGAGA GAGAGAGAGA GAGAGCCGTA AGGGAGAGCT CTTAGAGGAG ACCAACAACC CTTACGAACT  CTTAAATGTC GGAAGGTCTG ATACCACCGC CGTGAGGTGG GGTTGCTCTA GCTGTCGACG ATTCGGCTCA CCCAACACGA AGAGTTCCTC GTCGACTTAA ATAAACCGCG TCTGAAATCA  CATCGGCGGT GAAAAATCTC GCAGGGATGC GACGCTTCGG TGATAATCGC CTCGCCGAAC GGCGACGCCG AAAAGGACGC CGATGAGAAC ATCTCCCTCG CCGGAGACGG GTTCGACACA  GTCATCAAGG CCAAGACCGC CGTGGAGAGC AGGTGCCCCG GCGTCGTCTC CTGCGCCGAC ATTCTCGCCC TCGCCACCAG AGACGTCGTC GTCCTCGTAA GCCCACCACC TCCTCCTCCT  CTGCTCATCA TCCTCCACAC TCAGACCCGG TATTCAATTC CCTAATGTTT TTCCTTTTTC CGACGCGGAA CCAGTCCGGA GGGCCGTCGT TCACTGTGGA ATTAGGCCGC TTGGACGGTC  TCATCTCGCA GAGATCGCGG GTAGCAGGCA AGCTGCCGAA ACCAGACCAA AGCCTTGATC AGCTCAACGC AATCTTCAAG CAGAACAACC TCACTGAAAC CGACGTGATC ATCCTCTCCG  GCGCCCACAC CCTCGGCTTC GCCCACTGCG GCACCTTCTC GGACCGCCTC TACTCCAACC CTGATCCCAC GCTCAACGCC GACTTTGCCC GGCAACTGCA GGACGCCTGC CCGCGCAACG  TTGACCCGCT GGTTGCCATC AACCTGGATG TCAACACCCC GAGGACTTTC GACAACGTCT TCTTCAGCAA CCTGGTCGAG GGAAAGGGGC TGCTAAGGTC TGACCAGGTG CTGTTCTCGG  ACCCACGGTC CCGGAGCAAG GTGGTGGAGT TCGCCGGCAA CGCCGCCGGG TTCGGCGCCG CCTTCGCCGA CGCGATGGTC CGCCTGGGAA GGGTGGGGGT GAAGACTGGC AGCGGCGGCG 
AGATACGGCG GGACTGCGCC GCTTTCAACT G 

Retrieve as FASTA  
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TGGAGTCATGGAGGAGACTATCGTCTCTGGCTGTACTGCTGCTGATGGCTGCCGGGCAAGTAGAATCCCAGCTGAGGACTGACTTCTACGCCTCGACCTGCCCCGACGTTGAGTCCATCG
TGAGAGAGGAGGTGAGGAAGAAGTTCGTCCAGACCTTCGTCACCGTCCCGGCCACGCTGAGGCTTTTCTTCCACGACTGCTTCGTCGAG
GTACGCTTCGACAATCTACACATCCCGTAGG
ACATCGCTGCTGTTGGGGTGCAAGCCCACGAAGATAATAGATATATTTTCCTTGTGAGAGCGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCCGTAA
GGGAGAGCTCTTAGAGGAGACCAACAACCCTTACGAACTCTTAAATGTCGGAAGGTCTGATACCACCGCCGTGAGGTGGGGTTGCTCTAGCTGTCGACGATTCGGCTCACCCAACACGAA
GAGTTCCTCGTCGACTTAAATAAACCGCGTCTGAAATCACATCGGCGGTGAAAAATCTCGCAGGGATGCGACGCTTCGGTGATAATCGCCTCGCCGAACGGCGACGCCGAAAAGGACGCC
GATGAGAACATCTCCCTCGCCGGAGACGGGTTCGACACAGTCATCAAGGCCAAGACCGCCGTGGAGAGCAGGTGCCCCGGCGTCGTCTCCTGCGCCGACATTCTCGCCCTCGCCACCAGA
GACGTCGTCGTCCTC
GTAAGCCCACCACCTCCTCCTCCTCTGCTCATCATCCTCCACACTCAGACCCGGTATTCAATTCCCTAATGTTTTTCCTTTTTCCGACGCGGAACCAGTCCGGAG
GGCCGTCGTTCACTGTGGAATTAGGCCGCTTGGACGGTCTCATCTCGCAGAGATCGCGGGTAGCAGGCAAGCTGCCGAAACCAGACCAAAGCCTTGATCAGCTCAACGCAATCTTCAAGC
AGAACAACCTCACTGAAACCGACGTGATCATCCTCTCCGGCGCCCACACCCTCGGCTTCGCCCACTGCGGCACCTTCTCGGACCGCCTCTACTCCAACCCTGATCCCACGCTCAACGCCG
ACTTTGCCCGGCAACTGCAGGACGCCTGCCCGCGCAACGTTGACCCGCTGGTTGCCATCAACCTGGATGTCAACACCCCGAGGACTTTCGACAACGTCTTCTTCAGCAACCTGGTCGAGG
GAAAGGGGCTGCTAAGGTCTGACCAGGTGCTGTTCTCGGACCCACGGTCCCGGAGCAAGGTGGTGGAGTTCGCCGGCAACGCCGCCGGGTTCGGCGCCGCCTTCGCCGACGCGATGGTCC
GCCTGGGAAGGGTGGGGGTGAAGACTGGCAGCGGCGGCGAGATACGGCGGGACTGCGCCGCTTTCAACTGA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TGGAGTCATGGAGGAGACTATCGTCTCTGGCTGTACTGCTGCTGATGGCTGCCGGGCAAGTAGAATCCCAGCTGAGGACTGACTTCTACGCCTCGACCTGCCCCGACGTTGAGTCCATCG
TGAGAGAGGAGGTGAGGAAGAAGTTCGTCCAGACCTTCGTCACCGTCCCGGCCACGCTGAGGCTTTTCTTCCACGACTGCTTCGTCGAG
GGATGCGACGCTTCGGTGATAATCGCCTCGC
CGAACGGCGACGCCGAAAAGGACGCCGATGAGAACATCTCCCTCGCCGGAGACGGGTTCGACACAGTCATCAAGGCCAAGACCGCCGTGGAGAGCAGGTGCCCCGGCGTCGTCTCCTGCG
CCGACATTCTCGCCCTCGCCACCAGAGACGTCGTCGTCCTC
TCCGGAGGGCCGTCGTTCACTGTGGAATTAGGCCGCTTGGACGGTCTCATCTCGCAGAGATCGCGGGTAGCAGGCAAGC
TGCCGAAACCAGACCAAAGCCTTGATCAGCTCAACGCAATCTTCAAGCAGAACAACCTCACTGAAACCGACGTGATCATCCTCTCCGGCGCCCACACCCTCGGCTTCGCCCACTGCGGCA
CCTTCTCGGACCGCCTCTACTCCAACCCTGATCCCACGCTCAACGCCGACTTTGCCCGGCAACTGCAGGACGCCTGCCCGCGCAACGTTGACCCGCTGGTTGCCATCAACCTGGATGTCA
ACACCCCGAGGACTTTCGACAACGTCTTCTTCAGCAACCTGGTCGAGGGAAAGGGGCTGCTAAGGTCTGACCAGGTGCTGTTCTCGGACCCACGGTCCCGGAGCAAGGTGGTGGAGTTCG
CCGGCAACGCCGCCGGGTTCGGCGCCGCCTTCGCCGACGCGATGGTCCGCCTGGGAAGGGTGGGGGTGAAGACTGGCAGCGGCGGCGAGATACGGCGGGACTGCGCCGCTTTCAACTGA

Retrieve as FASTA