Entry information : GbPrx06
Entry ID 1322
Creation 2007-03-23 (Christophe Dunand)
Last sequence changes 2015-02-13 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-12-01 (Christophe Dunand)
Peroxidase information: GbPrx06
Name GbPrx06
Class Class III peroxidase    [Orthogroup: Prx187]
Taxonomy Eukaryota Viridiplantae Streptophyta Ginkgoopsida Ginkgoaceae Ginkgo
Organism Ginkgo biloba    [TaxId: 3311 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GbPrx06
start..stop
S start..stop
GbPrx54 521 0 9..339 8..337
GbPrx12 487 6.22e-175 15..339 13..334
GbPrx42 456 1.08e-162 12..339 10..338
PtaPrx60 438 2.59e-155 21..339 21..346
Literature and cross-references GbPrx06
Literature Brenner,E.D., Twigg,R.W., Runko,S.J., Katari,M.S., Dedhia,N.N., O'Shaughnessy,A.L., Balija,V., Martienssen,R.A., McCombie,R.W., Benfey,P., Coruzzi,G. and Stevenson,D. Expressed tag sequences from Ginkgo microsporophyll
EST ref. GenBank:   DR064878
Protein sequence: GbPrx06
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   339 (307)
PWM (Da):   %s   37054.72 (33704.8) Transmb domain:   %s   o5-27i
PI (pH):   %s   8.03 (7.76) Peptide Signal:   %s   cut: 33 range:33-339
Sequence
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAASFHPFHG TVNVIISHLV ILLALLIRGS AAYDNDLSPY FYEHSCPHAL SIVKSVVKKA VEKEARMAAS LLRLHFHDCF VHGCDASVLL DDTPSFRGEK TANPNKNSLR GFDVVDDIKS  QLESACPGIV SCADIVAIAA RDSVALRGGP EWSVPLGRRD SRWASFSGAN QNIPAPNSTL QTLTTKFELQ GLNEEDLVAL SGGHTIGQAR CISFRQRVYG RSGNQKPDLA IDESYSTQLK 
SSCPRSGGDN NLSPLDVVSP TKFDNQYFKN VENLKGLLVT DAELYSNHMN PEMAKIVSVY AANKDLFFKQ FAESMVKMSS IKLLTGSKGE IRHNCRRMN 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no prediction from SymDB, scaffold259) and RNA seq (gba_locus_680_iso_1_len_1335_ver_2). No EST available.
DNA
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CDS
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cDNA
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