Entry information : SpolPrx25 ( Spipo10G0044700)
Entry ID 13226
Creation 2015-06-09 (Christophe Dunand)
Last sequence changes 2015-06-09 (Christophe Dunand)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-02-27 (Christophe Dunand)
Peroxidase information: SpolPrx25 ( Spipo10G0044700)
Name (synonym) SpolPrx25 ( Spipo10G0044700)
Class Class III peroxidase    [Orthogroup: Prx002]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Araceae Spirodela
Organism Spirodela polyrhiza (great duckweed)    [TaxId: 29656 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SpolPrx25
start..stop
S start..stop
CescPrx37 513 0 7..329 13..336
LminPrx28 506 0 22..327 21..325
LminPrx01 502 0 22..327 21..325
SpolPrx16 477 3.65e-171 22..327 28..329
Gene structure Fichier Exons


exon

Literature and cross-references SpolPrx25 ( Spipo10G0044700)
DNA ref. Phytozome 12:   pseudo10 (3323893..3324882)
Cluster/Prediction ref. Phytozome Gene 12:   31520024
Protein sequence: SpolPrx25 ( Spipo10G0044700)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   329 (308)
PWM (Da):   %s   34954.83 (33013.8) Transmb domain:   %s   i7-24o
PI (pH):   %s   7.31 (7.31) Peptide Signal:   %s   cut: 22 range:22-329
Sequence
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGGSAVAALV VVVVAAATAM AEGKLAVDYY AATCPRAAEI VSETVVSKQI ASPTTAAGTL RVFFHDCFLD GCDASLLVSS TAFHRAERDA DINLSLPGDA FDLVVRAKTA LELTCPGTVS  CADVLALATR DLLTMLGGPF FPVRLGRKDS LVSRADLAAA RLPLANATVS ELIALFAQRG FSAQELVALS GAHTVGFAHC KEFAARMGLD GGGKADAAAD PRYAEGVRRA CADYRSRPTV 
AVFNDIMTPN KFDNVYFQNL RRGLGLLGTD QALAGDPRTR PFVELYAADE GVFFKDFARA MEKLSVYGVK TGRQGEVRRR CDQFNAFTT* 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron).
Promoter
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DNA
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CDS
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