Sequence Properties
first value : protein
second value (mature protein)
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Length (aa):  |
313 (289) |
| PWM (Da): |
32563.19 (29923.8) |
Transmb domain: |
i7-24o |
| PI (pH):
| 5.59 (4.99) |
Peptide Signal:
| cut: 25 range:25-313 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MAATHSVSLA SLLVLLLYVF TSHAQLTANF YSSSCPNLQT IVQSAMQTAx xxxxxxASLL RLFLHDCFVQ GCDASVLLVD TATFQGEQSA GPNFNSIRGM DVIEDIKSAV EASCNRTVSC
ADILALATRD GVVLSGGPSW TVLLGRRDAT TASFDAANRD IPGPSSSLSA LTTRFANDGL SLQDLVALSG AHTIGFARCL FFRTNDVNID PNYAASVRDN CQQGGGNSLS PLDVTTPRVF
DNAYYRNLVS LRGFLHSDQE LFNNGSADPI VQSYVASSSL FFRDFAAAMV KLGNISPPTG SSGEIRRVCS RVN*
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Retrieve as FASTA
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| Remarks |
Complete sequence from genomic (introns 1 and 2). Incorrect prediction from Phytozome (Exon 1 is missing due to frame shift and extra short 3' exon). |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCGGCCA CACACAGCGT CTCTCTTGCC TCCCTCCTCG TTCTCCTCCT GTACGTGTTC ACCTCACACG CGCAACTGAC AGCGAACTTC TACTCGTCGA GCTGTCCCAA CCTGCAGACG
ATCGTACAAA GTGCCATGCA AACGGCCnnn nnnnnnnnnn nnnnnnnCGC CTCCCTGCTC CGCCTCTTCC TTCACGACTG CTTCGTCCAA GTAAGCGCAA GCACAGACTC CTGTAGATGA
CGGACCGCTG GTCTCTCTTC ACGCTGCCGC AACGGTTCTA ATGTCGCCGC ACGTGTGATC CTGCAGGGCT GCGACGCGTC GGTGCTCCTG GTCGACACCG CGACGTTCCA AGGCGAGCAG
AGCGCCGGCC CAAACTTTAA CTCCATTCGT GGCATGGACG TCATCGAGGA CATCAAGTCC GCCGTCGAGG CATCGTGCAA CCGCACCGTG TCGTGCGCCG ACATCCTGGC CCTCGCCACC
AGGGACGGCG TCGTCCTGGT GAGTTCTTCC CTACGACATC GTTGGGATCG TCCTGTTGAG CTTCTTTCGA ACGAATCCAC TCTCTAAACA GGGGAGGCTG CCTTCTCCAT GCAGAGCGGA
GGACCTTCGT GGACGGTGCT GCTGGGGCGG CGGGACGCCA CAACGGCCAG CTTCGACGCA GCCAATAGAG ACATCCCTGG TCCATCGTCC AGCCTCTCTG CCCTCACCAC TAGGTTCGCC
AACGACGGCC TGAGCTTGCA GGATCTCGTG GCCCTCTCCG GCGCGCACAC CATCGGCTTC GCCCGCTGCT TATTTTTCCG AACCAACGAC GTGAACATTG ACCCCAACTA TGCCGCGTCT
GTCCGCGATA ACTGCCAGCA GGGCGGCGGT AACAGCTTAT CCCCGCTCGA CGTCACCACC CCGAGGGTCT TCGACAACGC CTACTACAGA AATCTCGTGT CTCTGCGGGG TTTCCTCCAC
TCCGACCAGG AGCTCTTCAA TAATGGCTCC GCGGATCCCA TCGTCCAAAG CTACGTGGCC AGCAGCTCCC TCTTCTTCAG AGACTTTGCG GCGGCGATGG TAAAGTTGGG CAACATCAGC
CCCCCCACCG GCTCCAGCGG GGAGATCCGG CGGGTCTGCA GCAGGGTGAA CTGA
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCGGCCA CACACAGCGT CTCTCTTGCC TCCCTCCTCG TTCTCCTCCT GTACGTGTTC ACCTCACACG CGCAACTGAC AGCGAACTTC TACTCGTCGA GCTGTCCCAA CCTGCAGACG
ATCGTACAAA GTGCCATGCA AACGGCCnnn nnnnnnnnnn nnnnnnnCGC CTCCCTGCTC CGCCTCTTCC TTCACGACTG CTTCGTCCAA GGCTGCGACG CGTCGGTGCT CCTGGTCGAC
ACCGCGACGT TCCAAGGCGA GCAGAGCGCC GGCCCAAACT TTAACTCCAT TCGTGGCATG GACGTCATCG AGGACATCAA GTCCGCCGTC GAGGCATCGT GCAACCGCAC CGTGTCGTGC
GCCGACATCC TGGCCCTCGC CACCAGGGAC GGCGTCGTCC TGAGCGGAGG ACCTTCGTGG ACGGTGCTGC TGGGGCGGCG GGACGCCACA ACGGCCAGCT TCGACGCAGC CAATAGAGAC
ATCCCTGGTC CATCGTCCAG CCTCTCTGCC CTCACCACTA GGTTCGCCAA CGACGGCCTG AGCTTGCAGG ATCTCGTGGC CCTCTCCGGC GCGCACACCA TCGGCTTCGC CCGCTGCTTA
TTTTTCCGAA CCAACGACGT GAACATTGAC CCCAACTATG CCGCGTCTGT CCGCGATAAC TGCCAGCAGG GCGGCGGTAA CAGCTTATCC CCGCTCGACG TCACCACCCC GAGGGTCTTC
GACAACGCCT ACTACAGAAA TCTCGTGTCT CTGCGGGGTT TCCTCCACTC CGACCAGGAG CTCTTCAATA ATGGCTCCGC GGATCCCATC GTCCAAAGCT ACGTGGCCAG CAGCTCCCTC
TTCTTCAGAG ACTTTGCGGC GGCGATGGTA AAGTTGGGCA ACATCAGCCC CCCCACCGGC TCCAGCGGGG AGATCCGGCG GGTCTGCAGC AGGGTGAACT GA
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Retrieve as FASTA
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