Entry information : SpolPrx31 ( Spipo2G0096700)
Entry ID 13233
Creation 2015-06-09 (Christophe Dunand)
Last sequence changes 2015-06-09 (Christophe Dunand)
Sequence status complete
Reviewer Catherine Mathe
Last annotation changes 2016-03-18 (Catherine Mathe)
Peroxidase information: SpolPrx31 ( Spipo2G0096700)
Name (synonym) SpolPrx31 ( Spipo2G0096700)
Class Class III peroxidase    [Orthogroup: Prx009]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Araceae Spirodela
Organism Spirodela polyrhiza (great duckweed)    [TaxId: 29656 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SpolPrx31
start..stop
S start..stop
CescPrx05 562 0 7..329 6..329
LminPrx39 561 0 23..329 23..329
LminPrx48 559 0 23..329 20..326
LminPrx47 558 0 23..329 20..326
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '13233' 'join(6898503..6898721,6898796..6898996,6899098..6899263,6899979..6900385)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 6898503..6898721 217 N° 2 6898796..6898996 199 N° 3 6899098..6899263 164 N° 4 6899979..6900385 405
join(6898503..6898721,6898796..6898996,6899098..6899263,6899979..6900385)


exon

Literature and cross-references SpolPrx31 ( Spipo2G0096700)
DNA ref. Phytozome 12:   pseudo2 (6898503..6900385)
Cluster/Prediction ref. Phytozome Gene 12:   31510347
Protein sequence: SpolPrx31 ( Spipo2G0096700)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   330 (304)
PWM (Da):   %s   35350.95 (32919.6) Transmb domain:   %s   i5-27o
PI (pH):   %s   9.15 (9.12) Peptide Signal:   %s   cut: 27 range:27-330
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MGKPGVVAAALLAALSVCLLSVPAAAQLRRDYYASTCPNVENIVRGVVQTKFRQTFVTVPATLRLFFHDCFVEGCDASVMVASSGSNTAEKDHPDNLSLAGDGFDTVIKAKAAVDAVPQC
RNKVSCADILALATRDVVALSGGPSYAVELGRLDGLRSTASSVNGKLPQPTFNLNQLTSMFAANGLSQTDMIALSAAHTLGFSHCSKFSKRIYSFSSRNPVDPTLNRTYAAQLQAMCPRN
VDPRIAIDMDPVTPRTFDNVYFKNLQQGLGLFSSDQVLHTDTRSRPTVNAWAQNSAAFERAFVTAMTKLGRVGVKTGSRGNIRTRCDILG*

Retrieve as FASTA  
Remarks
Promoter
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Send to cis Analysis
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TGTGTTCCCG TCGGAACCTC GCTTGCGCGT ACCGAAGTGG ACTGAATAAT TGAGTCATTT ATTACGGAGA AACGAAGCAC GTTAATACAA ATATCGCGCG GAACCAGCTG GGTTGTTCTG  ATTTTTTGCG ACCAGCGTGG GAATCAGTAT ACGCTACGAA CGAGGAAGGT GGATTCTCAT GTTCCAGGAG AAGAAAATAG TCAAAACGAT GTGGGTGATC AGCTCCTCGT ATCAAGTGAT  CGTGAACTCG TGCCAAGCTA AATAATTCCA TGAATATCTG GTTTTTATAT TCGTTTTTTT CCCGATAAAT GCTAATCGTG AGCAAAATTT CATCCGTTTG GGTGTGTTTT CGCGAGTACA  ATTTGAGCTC TCTTTAACTT AGCTTTGTTT ATATCTTGTA GGTTTTTCAA ACCGTTCTAA ACATATCACA TTGCGATAAA ATCTTTGACC CGATAATGAC ATCTGTCTTA TTACATCTAA  TCCACGTTCT CTCTCCCCCT CCCCTCTCTC TATCTATATT TATATATACG TATGCATGTA TGTACATTAA GTCCGAAGGA AATGTGATTT GAAATCAACG TAGTCGAAGA AGAACGTGTA  AACCCACCGG GGTCTTAGAG CGTCGCTCAA GAGTGGATAT CGCCGGAACA AGCCGGACTC GAGAGGAACG CATGCATAGA TATTTATATC AACACACGTA TACACGCGCC CACACTATCA  CAATGTGTAT AAGTATAGAC TCTAGTGATC GGAGCCGCAC TACTAAAGTC GTCTGGTCCC TGGAATATAT GTCTTTGATC CAATCTATTA CGATATTCCC AGCGCGTCTG CTTTGTCACA  TTCGTCTCAT GAACAGGAAG GACTCCACGG TGGAGAAGAT TCGTCTCATG AAAGCTAACA TCCATGGAGG CAAAGATTCG CGCTTGCTGC TAGAGCGACA GCCAAACGAG AAAAGAGGGG  CCGATGATGG TGCTTCACTT GAAGGAAGAC AGTGTCCCTT CGCCCTCCCT TCTTCTTCAG GCTTCCTGGA TCTTCCGCTT TTATTCCTCT CAACGTTGTT TCATTTAGAT GGGCATATTC  CTCTTCCTGC ACGCTGCAAA CCCCGTCATC AAATCCATGC TAACTTGATC CTCTCTCTCT TTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTTT CTGTGGGGGG  AGATCCAAAG AGAGGCTAGC GCAGTCCAAG CTTATCGAAA GAAGTGGTAA GGTGATACAA GGCCAGATGA TGGGTGTTTA AATGCCCGGC AATTACGCAA CCTTGGCCTA ATATTAAAGA  GCTGTGGTAC TTCGAGAGAA ACTTGCAGGG TCCCCAGGTA GCCTCCTAAA CTCATTTAAA GCATCGATCC GACGGTGATA GTGAGAGCTC TCTAGTGGAA TGACTGAAAC AGGATTTTCA  CGCGTGTGGG TCTGGCTTCT GCTGAAAGAG GGGAGAGTTT TGTTCAACCC ATCTCGGTGT TTGATAAAAT GCTTGCTTCG CGGACAAATC CGCCTACTTC CCAGCTATGA TTTTCAGTAT  AGCAAATAGA AGTCGTCGTC GAGCTGCCAG CTGCCTCTTG TTGACTCGTT ATCGTCCTAG TGCGGACGAA TAGGCGGCCG GCGGGGAGAA GGATTCGGTC ACCGTCATGC GGAGTGAATG  GATATCGGGC TCGTCAAAGC TTCGTGCAAT GGAAGCCAGT CTGATCGGGG AAGGGGAGTA GTTGAGTCCC TTGCCTCTCC ACGCCTTCTC TCCTCTAACT AGTCTCCATC GAGGTCCGTG  GCTTCTTGAA ATTTTTAAGA GACAACTGGC TGGATAGCCC CACATCCAAC GCACCTAGTG GGGTCGCCCC ACCACCTATA TATTCAGCCC CGCCTTCCCT CTCTTCCGCT CCCCATCTGT  ACCCATCAAA ATCAAGTAGT CCACCTCCTC TCTCTGCCTC CCCCTTTCCC CCCTCCCCCG GTTCTTTCTA CTGATAGCAA ATGGGTAAAC CCGGGGTGGT GGCCGCGGCG CTTCTGGCCG  CGCTGAGCGT TTGCCTCCTT TCAGTACCGG CCGCGGCGCA GCTCCGGCGG GACTACTACG CCAGCACATG CCCCAACGTG GAGAACATCG TGAGGGGCGT GGTGCAGACC AAGTTTCGGC  AAACCTTTGT CACCGTCCCT GCGACCCTCA GGCTCTTCTT CCACGACTGC TTCGTCGAGG TCGGAAACAA CTACACGGCC GCATTCGCAT CCAGCCTGAG CCATTATGTC GGTGCTAACC  GCGTGGATTT CAGGGCTGTG ATGCGTCCGT CATGGTGGCG TCCTCGGGGT CCAACACCGC CGAGAAGGAC CACCCGGACA ACCTATCTCT GGCTGGAGAC GGGTTCGACA CTGTAATCAA  GGCAAAGGCC GCCGTCGACG CCGTGCCGCA GTGCCGGAAC AAGGTCTCCT GCGCCGACAT CCTCGCCCTC GCAACGCGTG ACGTCGTTGC TCTGGTCTGT TTCCCCCCAT TTGCTTTCAT  CCTCTTCCTT TCCCTGCTGC CGCTGAAAGG AGTTCTGATG GGTTGTCTCA ACTTCATTTT CGCAATGGGG AGCAGTCCGG CGGCCCTTCG TATGCAGTGG AGCTGGGCAG ACTAGACGGC  CTCCGCTCGA CGGCGTCTAG CGTAAACGGG AAGCTCCCCC AGCCTACCTT CAACCTCAAT CAGCTCACCT CCATGTTCGC CGCCAACGGC CTCTCTCAGA CTGACATGAT CGCGCTCTCA  GGTACTAGTC CAGTTCTTCT CTCATAGAGC CCGAGCCCCT CCCCCTTCTA CCGGCGGCGT GCTTCCTCGC CGTCCTCGGG AGAAGGATCA GCTGCTCAGC TGAGATGTCA TTTTCATGAG  GCCCGGATTT TTAGGTCTAT CTCCATGAAA AATGACGACT TTTACAGCCT CTCCGCCCCT CAGAAGCCAT TGATCCATTC AATCAGGGCT TCTCTCCTGG TTTACGCGTA AAACCCTGCT  ACGACCTTTG AATAACTTAT TATTTAATTA TTTTTCGTGA GTCCTACCCC TCCTTGTTTC CCACTCCCCC ATTTAGTTCT TTAAAGCGAC ATATTTCGTC CTCATCCACT AATTTCACAC  GACAAGCTCG TGAATTAGAC AAAGAAACGA TCTTGAGGCT CTTCTTGCAT TTCGAGCCTC TTCCTTGATT GAGATGTTGA TAAGGCCCGT CTATTATGTG ATTCTCTTTA ATTTATTGTA  CGCGGAAAAG GGCACAGAGG TCAATCCAGA CTTTTTAAAA AGGGTTTAAT CAATTATGGT TTTCCTACAT GTTCTTGATC TTGTGGGGCC GTCCTCAGGA TCCTCAGAAG GAATGAACCT  TTTTTTACCC AAGTTTTGTT TTTTTTTTTA ATTCAGTCGC GGTGGAGACC ATGGTTACCG CCCGTCTTGG TTTCCGTTGC CCTGTCTGAG CCGTGCATCT GGTTGGAAAC CTGCAGCGGC  GCACACTCTG GGATTCTCAC ACTGCAGCAA GTTCTCAAAG CGCATCTACA GCTTCAGCTC AAGGAACCCG GTGGACCCGA CGCTGAACAG GACCTACGCG GCGCAGCTGC AGGCCATGTG  CCCGCGCAAC GTCGACCCCA GGATCGCCAT CGACATGGAC CCCGTCACCC CGAGGACCTT CGACAATGTC TACTTCAAGA ACCTCCAGCA AGGGTTGGGC CTCTTCTCCT CCGATCAGGT  CCTCCATACC GACACCCGTT CCCGCCCCAC TGTCAACGCC TGGGCCCAGA ACTCTGCAGC CTTCGAACGG GCCTTCGTCA CCGCCATGAC CAAGCTCGGC CGCGTCGGCG TCAAGACTGG 
GTCGCGGGGG AACATCAGAA CCCGGTGCGA TATCCTCGGC TAG 

Retrieve as FASTA  
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGTAAACCCGGGGTGGTGGCCGCGGCGCTTCTGGCCGCGCTGAGCGTTTGCCTCCTTTCAGTACCGGCCGCGGCGCAGCTCCGGCGGGACTACTACGCCAGCACATGCCCCAACGTG
GAGAACATCGTGAGGGGCGTGGTGCAGACCAAGTTTCGGCAAACCTTTGTCACCGTCCCTGCGACCCTCAGGCTCTTCTTCCACGACTGCTTCGTCGAG
AGGTCGGAAACAACTACACGG
CCGCATTCGCATCCAGCCTGAGCCATTATGTCGGTGCTAACCGCGTGGATTTCAGGGCTGTGATGCGTCCGTCATGGTGGCGTCCTCGGGGTCCAACACCGCCGAGAAGGACCACCCGGA
CAACCTATCTCTGGCTGGAGACGGGTTCGACACTGTAATCAAGGCAAAGGCCGCCGTCGACGCCGTGCCGCAGTGCCGGAACAAGGTCTCCTGCGCCGACATCCTCGCCCTCGCAACGCG
TGACGTCGTTGCTCTG
TGGTCTGTTTCCCCCCATTTGCTTTCATCCTCTTCCTTTCCCTGCTGCCGCTGAAAGGAGTTCTGATGGGTTGTCTCAACTTCATTTTCGCAATGGGGAGCAGT
CCGGCGGCCCTTCGTATGCAGTGGAGCTGGGCAGACTAGACGGCCTCCGCTCGACGGCGTCTAGCGTAAACGGGAAGCTCCCCCAGCCTACCTTCAACCTCAATCAGCTCACCTCCATGT
TCGCCGCCAACGGCCTCTCTCAGACTGACATGATCGCGCTCTCAG
AGGTACTAGTCCAGTTCTTCTCTCATAGAGCCCGAGCCCCTCCCCCTTCTACCGGCGGCGTGCTTCCTCGCCGTC
CTCGGGAGAAGGATCAGCTGCTCAGCTGAGATGTCATTTTCATGAGGCCCGGATTTTTAGGTCTATCTCCATGAAAAATGACGACTTTTACAGCCTCTCCGCCCCTCAGAAGCCATTGAT
CCATTCAATCAGGGCTTCTCTCCTGGTTTACGCGTAAAACCCTGCTACGACCTTTGAATAACTTATTATTTAATTATTTTTCGTGAGTCCTACCCCTCCTTGTTTCCCACTCCCCCATTT
AGTTCTTTAAAGCGACATATTTCGTCCTCATCCACTAATTTCACACGACAAGCTCGTGAATTAGACAAAGAAACGATCTTGAGGCTCTTCTTGCATTTCGAGCCTCTTCCTTGATTGAGA
TGTTGATAAGGCCCGTCTATTATGTGATTCTCTTTAATTTATTGTACGCGGAAAAGGGCACAGAGGTCAATCCAGACTTTTTAAAAAGGGTTTAATCAATTATGGTTTTCCTACATGTTC
TTGATCTTGTGGGGCCGTCCTCAGGATCCTCAGAAGGAATGAACCTTTTTTTACCCAAGTTTTGTTTTTTTTTTTAATTCAGTCGCGGTGGAGACCATGGTTACCGCCCGTCTTGGTTTC
CGTTGCCCTGTCTGAGCCGTGCATCTGGTTGGAAACCTGCAGCGGCGCACACTCTGGGATTCTCACACTGCAGCAAGTTCTCAAAGCGCATCTACAGCTTCAGCTCAAGGAACCCGGTGG
ACCCGACGCTGAACAGGACCTACGCGGCGCAGCTGCAGGCCATGTGCCCGCGCAACGTCGACCCCAGGATCGCCATCGACATGGACCCCGTCACCCCGAGGACCTTCGACAATGTCTACT
TCAAGAACCTCCAGCAAGGGTTGGGCCTCTTCTCCTCCGATCAGGTCCTCCATACCGACACCCGTTCCCGCCCCACTGTCAACGCCTGGGCCCAGAACTCTGCAGCCTTCGAACGGGCCT
TCGTCACCGCCATGACCAAGCTCGGCCGCGTCGGCGTCAAGACTGGGTCGCGGGGGAACATCAGAACCCGGTGCGATATCCTCGGCTAG

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGTAAACCCGGGGTGGTGGCCGCGGCGCTTCTGGCCGCGCTGAGCGTTTGCCTCCTTTCAGTACCGGCCGCGGCGCAGCTCCGGCGGGACTACTACGCCAGCACATGCCCCAACGTG
GAGAACATCGTGAGGGGCGTGGTGCAGACCAAGTTTCGGCAAACCTTTGTCACCGTCCCTGCGACCCTCAGGCTCTTCTTCCACGACTGCTTCGTCGAG
GGCTGTGATGCGTCCGTCATG
GTGGCGTCCTCGGGGTCCAACACCGCCGAGAAGGACCACCCGGACAACCTATCTCTGGCTGGAGACGGGTTCGACACTGTAATCAAGGCAAAGGCCGCCGTCGACGCCGTGCCGCAGTGC
CGGAACAAGGTCTCCTGCGCCGACATCCTCGCCCTCGCAACGCGTGACGTCGTTGCTCTG
TCCGGCGGCCCTTCGTATGCAGTGGAGCTGGGCAGACTAGACGGCCTCCGCTCGACGGCG
TCTAGCGTAAACGGGAAGCTCCCCCAGCCTACCTTCAACCTCAATCAGCTCACCTCCATGTTCGCCGCCAACGGCCTCTCTCAGACTGACATGATCGCGCTCTCAG
CGGCGCACACTCTG
GGATTCTCACACTGCAGCAAGTTCTCAAAGCGCATCTACAGCTTCAGCTCAAGGAACCCGGTGGACCCGACGCTGAACAGGACCTACGCGGCGCAGCTGCAGGCCATGTGCCCGCGCAAC
GTCGACCCCAGGATCGCCATCGACATGGACCCCGTCACCCCGAGGACCTTCGACAATGTCTACTTCAAGAACCTCCAGCAAGGGTTGGGCCTCTTCTCCTCCGATCAGGTCCTCCATACC
GACACCCGTTCCCGCCCCACTGTCAACGCCTGGGCCCAGAACTCTGCAGCCTTCGAACGGGCCTTCGTCACCGCCATGACCAAGCTCGGCCGCGTCGGCGTCAAGACTGGGTCGCGGGGG
AACATCAGAACCCGGTGCGATATCCTCGGCTAG

Retrieve as FASTA