View Redoxidase 13234

Entry information : SpolPrx32 (Spipo1G0079200)

Entry ID	13234
Creation	2015-06-09 (Christophe Dunand)
Last sequence changes	2015-06-09 (Christophe Dunand)
Sequence status	complete
Reviewer	Catherine Mathe
Last annotation changes	2016-02-25 (Catherine Mathe)

Peroxidase information: SpolPrx32 (Spipo1G0079200)

Name (synonym)

SpolPrx32 (Spipo1G0079200)

Class

Class III peroxidase [Orthogroup: Prx021]

Taxonomy

Eukaryota Viridiplantae Streptophyta Monocotyledons Araceae Spirodela

Organism

Spirodela polyrhiza (great duckweed) [TaxId: 29656 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	SpolPrx32 start..stop	S start..stop
SpolPrx29	593	0	4..331	2..329
CescPrx62	481	1.44e-172	7..330	3..326
SpolPrx[P]33	468	1.16e-167	4..324	2..320
CescPrx64	467	3.72e-167	10..330	7..327

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '13234' 'complement(join(4921675..4922084,4922203..4922368,4922482..4922673,4922789..4923013))'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	4922789..4923013	223	N° 2	4922482..4922673	190	N° 3	4922203..4922368	164	N° 4	4921675..4922084	408
complement(join(4921675..4922084,4922203..4922368,4922482..4922673,4922789..4923 013))

Literature and cross-references SpolPrx32 (Spipo1G0079200)

DNA ref.	Phytozome 12: pseudo1 (4923013..4921675)
Cluster/Prediction ref.	Phytozome Gene 12: 31521219

Protein sequence: SpolPrx32 (Spipo1G0079200)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	330 (304)
PWM (Da):	35927.32 (33145.8)
PI (pH):	8.63 (8.72)	Peptide Signal:	cut: 27 range:27-330

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MGPGPRISGEIVFLALVLLMCLNATAESTLRVGYYEKTCPQAEFIVKKVIAKATKTDNGLPADFIRMHFHDCFVRGCDGSILIDSTSNNTAEKDSPINNPSLEGFEIIDEAKAKLEKKCK
GVVSCADILAFAARDSVELSGGFWYEVPSGRRDGRISRSSETFGNLAPPSFNLSQLTQNFASKGLNLDDLVTLSGAHTIGKSHCTSINSRLHNFSSTATTDPSLDPAYAKKLKKKCPKGS
TDPNLTVPMDPPSPEVFDSSYYKNILVHKGLFHSDQALLSSSKTANLVKQNAANEHLFKKRFAEAMVKMGNIEVLTGKKGEIRLNCRVIN*

Retrieve as FASTA

Remarks

Promoter►
Send to BLAST
Send to cis Analysis

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

GTGTGCGGCA TTCCATACGA AGTCACTTGT CGCCGGGGTG CTGTTGTCGA TGTCACTGGA TGCCGCTAGG ACGGATGTCC CGATGCCAGA AGTGGCAGTT GTTGATGTGG CGTGTGGTGG AGGCAGTGGT TCCGTAGGTA GTTGCTAGAG CTCCAAGTGA GAGAGACATT CAAAAAGGGC GTTCACTGAG TCGACAAGTT TACGAGCCCA TTCGGGGGTA TCGGAGAGGA GGGAGGTGAA CTGGTGATAG AGTATTTGGT GCCCAGATGG GTGCACATGC GGAGGTAGGG TTGACTGGCT CTGATACCAC TCTGTTGCGG CAAGCTGGGG GAGTAAAGGA GACGAGAGGG GAAAATGGTA GTGGGAGGAG TCGAAGAGGG AGTGAACTGC TCACAAGGAT GCCATCACGG TGGAGCCGAA CCCCGAAGGG AACCAAATTT CTATATTTCG ATTGCTGCTT TCCCCCGTCC GAGGGGGGGG GGTGTTTTAA AACAAACTCA ACTCTCACAC GACAATGAAA TAGAAAGCGC TAGTGGTCAA CGACGATGTC GCCGGTCAGC TAATAGTAGA CGAAGGCGTC GTCGACTTTA CCAATCCTGG TCCTCTGGGG GTAGCGGTTG CCGTGGGGGT GACGGTGTCA AGCGACGGGG CGTCTATCTC TGCATGCTCA GCTGATGCAC CAGCCCAATA ATCAGAACTA GAGTCCATTT GTCGTACTGT CCCGCGAACC ATCAGTTCCT GATCCCCATC AGTATGCCAC TTGATTGTGT CCACGGTCTG ATGGTAATGA GGTTTTCGAA TCAACGGCAT TATATCGCGA TCATGACGAG GCTTTTCTGT CTTGTTCACA CTCAGAGGCA TTATTGGAAG GTGGAATGGA GCTCTCAATG TTTTAGCTCT TATGTCTGGT TGCCAACTAC TCATCAGTAG GCATACATCA ATAGCTACAG AAAAACTGCT CAAATATATT GTCATAAGAT AACACGAAGC CGTTGAGAAG TCAATTCGAG ATGGATCTTT TGTCCGTGAG AAGTTTGCGG AATTTCCCTG TCGGGGTCTG ATTTTTCCAT TCTTTGACAT GAACAGCGAC CGACTCCGTC GGGCCAGTTC CTCACCAAAT CCTTTCTGCT AGTCGCGACA TAAGTGACCA TCACTACCGT TCGGGATGAG AGTTGCCTTG GTACTCGCAC CTGCTCATTG TCCAGGTTAC ACTTCCCTCC AGTAAGAGTT TTCTTTCAGT ACAAATGTAC ATAGCACTAT TGGTAAGAGG AATCAGAAAC TCAACTTAAA ACTATTCAAC TTGACAGCAG AAAAAAATAC CGGAGACATG AGAAGAAATC CGCGATCGTC GTGACATTAT CTTCTCTACA ATAATTAAGT TGCCGTCACA TCGAAGCGTG ACAGACACAC GTCTCTTGTG GAAGAGCACA TCATAGCACA TCATATTGAA TGACGATGAA TTTCTCCCTG AATTCAGGCT TTCACACACA AAAAAGACCC ATACTCATCA ATCTAGGGGA CAAATCAAAG GGCCAAAAGA TTTACAGAGT GCGTACTTCA AGAAGTTCAA CATACCTCCC ACTTGAGGGA TCAGGTGTGT TCTCTGATTC GGAAGAATCT TAGCGATCTT AAAAACAGTT CATCTCGACA TCCAATTGGT ATTGCGGAAC GATAAAGTGT TGAGGTTACT ATCATTATCA TGCTTCTTAA GAATCAAACT CTTGAGTTTC AGATGACTTG GTCGCTGGTC AACAGTGGGT GCCGTCACCA TCCGGACGAG CTGTTAAGAT CTATATTCAA GGAAACCACC CTCATTCAAC CACAACCTAA TACTTTCTCA CGATACGCTA GTACCCAACC ACCACGAACC AACTCTGCCC CACCATAATC CACTTAAATG GATAATCAAT AATTTCCATT AAAATACTAG AGGGCTGTGG ATCCCGTGAT TATAAGTAAG GCAGCGGAAT GCATGCAAAG GTATCAGGGC CTGAGCGATC ATGGGGCCGG GGCCGAGGAT AAGTGGGGAG ATAGTGTTCT TGGCCCTGGT GCTTCTAATG TGTCTCAATG CTACGGCAGA ATCTACGCTT CGAGTCGGTT ATTACGAAAA GACATGTCCC CAAGCAGAGT TTATCGTGAA GAAGGTTATA GCGAAGGCGA CGAAGACGGA CAATGGTCTA CCCGCCGATT TCATCAGGAT GCATTTTCAC GACTGTTTCG TGAGGGTGTG TTACGTAGCC AGTTACGCCG ATATTTATGT CTCTCGTCGA AAAGAAGATT ATGCTCGATT ACCGTAGCTC GTCAACGGCG GTTTATCTTC TTTCCTTCTG ATGTTTTTAG GGTTGCGACG GATCAATTCT TATCGACTCC ACCTCGAACA ACACCGCCGA GAAGGACTCA CCCATCAACA ACCCAAGCCT GGAAGGGTTC GAGATCATCG ACGAGGCCAA GGCCAAGCTG GAGAAGAAGT GCAAGGGTGT CGTGTCCTGC GCCGACATCC TCGCTTTTGC TGCCAGAGAT AGTGTTGAGC TGGTAGAATC AATGCCCTAA TGTTCTTAAC TTGATCGTAT CACTTGCGTA CACAAGACTT GGTGTCCCTG TGGATGAGCA TGGCTCTGCT CGGCTGACTT TGTTCGTGAC TGCAGAGCGG AGGATTTTGG TACGAAGTCC CCTCGGGAAG GAGGGACGGA AGGATCTCCC GTAGTTCAGA GACATTCGGA AACTTGGCGC CTCCGTCATT CAATTTATCA CAGCTCACAC AGAACTTTGC CAGCAAGGGT CTGAACCTGG ACGACTTGGT CACCCTCTCT GGTATGAAGA ATATAAACGT TTAAAGAGAT CTGTCAGTGG AACTTGAACA CAATTGAACC CATATATTGT GATTCCTACG ATTTTATTTT CTCATGCGGA ACTATTCTTG TAATTTCAGG GGCGCACACC ATCGGCAAGT CTCACTGCAC CAGCATCAAC AGTCGGCTGC ACAACTTCAG TTCGACAGCC ACCACCGATC CGAGCTTGGA TCCGGCTTAC GCGAAGAAAT TGAAGAAGAA GTGTCCCAAA GGGAGCACCG ACCCGAACCT GACCGTCCCG ATGGACCCTC CCAGTCCTGA GGTCTTCGAC TCCAGCTACT ACAAAAATAT CCTTGTTCAC AAGGGCCTCT TCCATTCAGA CCAGGCGCTC CTGTCGAGTT CCAAGACCGC TAATCTGGTG AAGCAGAACG CGGCCAACGA GCACCTCTTC
AAGAAGAGAT TTGCTGAGGC TATGGTGAAG ATGGGCAATA TCGAAGTGCT CACCGGGAAA AAAGGAGAGA TAAGATTGAA CTGTAGGGTG ATCAATTGA

Retrieve as FASTA

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGGGCCGGGGCCGAGGATAAGTGGGGAGATAGTGTTCTTGGCCCTGGTGCTTCTAATGTGTCTCAATGCTACGGCAGAATCTACGCTTCGAGTCGGTTATTACGAAAAGACATGTCCC
CAAGCAGAGTTTATCGTGAAGAAGGTTATAGCGAAGGCGACGAAGACGGACAATGGTCTACCCGCCGATTTCATCAGGATGCATTTTCACGACTGTTTCGTGAGGGTGTGTTACGTAGCC
AGTTACGCCGATATTTATGTCTCTCGTCGAAAAGAAGATTATGCTCGATTACCGTAGCTCGTCAACGGCGGTTTATCTTCTTTCCTTCTGATGTTTTTAGGGGGTTGCGACGGATCAATT
CTTATCGACTCCACCTCGAACAACACCGCCGAGAAGGACTCACCCATCAACAACCCAAGCCTGGAAGGGTTCGAGATCATCGACGAGGCCAAGGCCAAGCTGGAGAAGAAGTGCAAGGGT
GTCGTGTCCTGCGCCGACATCCTCGCTTTTGCTGCCAGAGATAGTGTTGAGCTGGTAGAATCAATGCCCTAATGTTCTTAACTTGATCGTATCACTTGCGTACACAAGACTTGGTGTCCC
TGTGGATGAGCATGGCTCTGCTCGGCTGACTTTGTTCGTGACTGCAGAGAGCGGAGGATTTTGGTACGAAGTCCCCTCGGGAAGGAGGGACGGAAGGATCTCCCGTAGTTCAGAGACATT
CGGAAACTTGGCGCCTCCGTCATTCAATTTATCACAGCTCACACAGAACTTTGCCAGCAAGGGTCTGAACCTGGACGACTTGGTCACCCTCTCTGGTATGAAGAATATAAACGTTTAAAG
AGATCTGTCAGTGGAACTTGAACACAATTGAACCCATATATTGTGATTCCTACGATTTTATTTTCTCATGCGGAACTATTCTTGTAATTTCAGGGGGGCGCACACCATCGGCAAGTCTCA
CTGCACCAGCATCAACAGTCGGCTGCACAACTTCAGTTCGACAGCCACCACCGATCCGAGCTTGGATCCGGCTTACGCGAAGAAATTGAAGAAGAAGTGTCCCAAAGGGAGCACCGACCC
GAACCTGACCGTCCCGATGGACCCTCCCAGTCCTGAGGTCTTCGACTCCAGCTACTACAAAAATATCCTTGTTCACAAGGGCCTCTTCCATTCAGACCAGGCGCTCCTGTCGAGTTCCAA
GACCGCTAATCTGGTGAAGCAGAACGCGGCCAACGAGCACCTCTTCAAGAAGAGATTTGCTGAGGCTATGGTGAAGATGGGCAATATCGAAGTGCTCACCGGGAAAAAAGGAGAGATAAG
ATTGAACTGTAGGGTGATCAATTGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGGGCCGGGGCCGAGGATAAGTGGGGAGATAGTGTTCTTGGCCCTGGTGCTTCTAATGTGTCTCAATGCTACGGCAGAATCTACGCTTCGAGTCGGTTATTACGAAAAGACATGTCCC
CAAGCAGAGTTTATCGTGAAGAAGGTTATAGCGAAGGCGACGAAGACGGACAATGGTCTACCCGCCGATTTCATCAGGATGCATTTTCACGACTGTTTCGTGAGGGGTTGCGACGGATCA
ATTCTTATCGACTCCACCTCGAACAACACCGCCGAGAAGGACTCACCCATCAACAACCCAAGCCTGGAAGGGTTCGAGATCATCGACGAGGCCAAGGCCAAGCTGGAGAAGAAGTGCAAG
GGTGTCGTGTCCTGCGCCGACATCCTCGCTTTTGCTGCCAGAGATAGTGTTGAGCTGAGCGGAGGATTTTGGTACGAAGTCCCCTCGGGAAGGAGGGACGGAAGGATCTCCCGTAGTTCA
GAGACATTCGGAAACTTGGCGCCTCCGTCATTCAATTTATCACAGCTCACACAGAACTTTGCCAGCAAGGGTCTGAACCTGGACGACTTGGTCACCCTCTCTGGGGCGCACACCATCGGC
AAGTCTCACTGCACCAGCATCAACAGTCGGCTGCACAACTTCAGTTCGACAGCCACCACCGATCCGAGCTTGGATCCGGCTTACGCGAAGAAATTGAAGAAGAAGTGTCCCAAAGGGAGC
ACCGACCCGAACCTGACCGTCCCGATGGACCCTCCCAGTCCTGAGGTCTTCGACTCCAGCTACTACAAAAATATCCTTGTTCACAAGGGCCTCTTCCATTCAGACCAGGCGCTCCTGTCG
AGTTCCAAGACCGCTAATCTGGTGAAGCAGAACGCGGCCAACGAGCACCTCTTCAAGAAGAGATTTGCTGAGGCTATGGTGAAGATGGGCAATATCGAAGTGCTCACCGGGAAAAAAGGA
GAGATAAGATTGAACTGTAGGGTGATCAATTGA

Retrieve as FASTA