Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
319 |
PWM (Da): |
34692.73 |
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PI (pH):
| 8.68 |
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Sequence 533
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MTTAATTAVPSRFPFPRSRRTALRHPGDPRPRCPLRRRRTPTECLRGEQVENPCSSSSSSEGHRGTVHDVCLLIFAVSRAVESGESLLVRTEVRKVLSKSKAPGVLRLAFHDAGTFDMNDGTGGMNGSIILELDRPENAGLRRSVVLEKAKSELDKVQNVSWADLVAVAGAEAVSLCGGPVIPIQLGRMDTSIPDPEGKLPQESLGAFDLKKCFFEKGFSTQELVTLSGAHTLGGKGFGSPIVFDNTYYKILLERPWASSGSSMSSMVGLPSDHALVEDAECLRWITIYAADERKFFEDFKRAYIKLVNTGASWRNV |
Retrieve as FASTA
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Remarks |
Complete sequence from genomic (8 introns). Incorrect prediction from Phytozome (two first exons are missing). |
Promoter►
Send to BLAST
Send to cis Analysis
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DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGACGACCGCGGCGACCACCGCCGTCCCCAGCCGCTTCCCGTTCCCACGTTCAAGACGAACAGCGCTTCGGCATCCAGGAGACCCACGGCCACGCTGCCCACTCAGACGCCGCCGGACG CCCACCGAGTGCCTGCGAGGGGAGCAAGTGGAGAACCCCTGCTCGTCCTCATCCTCCTCGGAAGGACACAGGGGCACAGGTGACGATATCCCCTTTTTCCTCGCTGGATCCTCTTCAACA CCATCCCCCTTCCCACAAGGAGCTCTCTCCTTCTACTGGACGAACAGCCATAATCATTCATGCACGGGCATATATTGACCCATGCCCGTACCTTTCATCGATAAAATTTCTATTTTGCGT TGTGGATGCCACCTCTACAGAAAATTCGCCCCCCTTGCCTTTTTTTCATCTCTCCTTAGGTTTTATTTGCCCATAATTTGACTGCAGGGGAGAGCAGGTCCTTCGCCTTCTACGGAAGAA GATTTTTCTTTCTGGCCACGGCTCCGTTGTTGCTCTCCAGTCAAGGCTCATCAGAATACTCCAATGCCAATTCACTACAGTATGTTTCATAATTTCCTTTCCGCTTCCTATCTTCCCTCT GAGGCAGCGGCCTCCAAATCCGCCCGATTCCTTGAACCCTGCGAGACTAGTGTAGACATGAACCCGAGTTCTGTAGTTCGATGGTCTGCTGCCTCTCGGTTCCGCCATGCTGCTTCAGTT TGACCGCATCCTTTCAAAACATTTTATACATCAATAAAGTAATAGAGGTCGATAAGTCACAAAAAACAATCTTAGAGATCAGTAAAGTTCTGGTAGAGTTGTGGCATCTTTCAAGAGACG AGAGCAACGTGCCAGTTTGGTAGCAGCCCAGTGGGGTTCAAGCAATGCTCTCGACAGGTGATGTCGGCGAGCTTTTGCATGTGGCCACAAGGAGTGCTGGGCTAGATCAATGGCGCATAC CAGGAGAAATTTAATTCCTTTCTTTTAAATTTCTGCACTTTGAGTACATGATGTCTGTCTTCTCATATTTGCTGTCAGCAGAGCAGTAGAGTCTGGCGAATCTTTGCTTGTTCGAACTGA GGTAAGGAAAGTCCTTTCAAAGTCCAAAGCTCCTGGGGTACTTCGGTTGGCCTTCCATGATGCAGGGACATTTGACATGAATGATGGCACAGGTTTATTTTGGAGCTAGAACTAGAGAAC GTTTCATGTCTCTTACTTTTGTCTACTCTACCTTGAATGGTGTCACGCAACATCAGGCTGTCTTTTAATGGATTATATGCTTTACGTTTCCTTGCAGGTGGAATGAATGGCTCAATTATT TTAGAACTTGATAGACCTGAAAATGCAGGTTTGCGTAGATCTGTGAAGGTGTGTCTGTTTTTCATCCTCTCTTTCGTGCATGTTTACGTGTTCAAAAAATATTTTTGTCTAGTTGGTGAA CATATATTATTGCTTCGTATCATGACCACCCACGCTCATTTTGGTGGATTATTACATGATATTATTTATGATTCTTCTTTTGTCGGTCTCTCCCTGTCTATTTATCCTCTTATCGACTCT CCACTTTGTTTTCTTTTCTGATTAGGTTTTGGAAAAAGCAAAGAGCGAGTTGGATAAGGTTCAGAATGGTATGACTTTCCTATTCACTGTAATTCATGTGTTCCTGCACGTGATTATTCT CTCCTCTTCTTGAAATTTATCATGGGTTACACTGGTGTCAGTGTCCTGGGCTGATTTGGTTGCTGTGGCTGGTGCGGAAGCCGTTTCGTTATGTGGAGGTCCCGTCATTCCTATTCAGTT AGGCAGGATGGATACAAGGTTAAATTTCACCTTACAAACATTGCACTCTTGCTAAGAAAAAAAAGAAGAAGAAGATGGATACAGGGTAATTAGTCCCGACTGTGTGATCAAATCGGTCGA TGGCTGTTTATGTGAATAAAAATTATCGATAATGCCTCCTTGAATATCTTATGAATTTTTCTCTTCTGATACGTAATTTTGGGTTTCTTGGAGGTTTACTTTCACAAGCAGAAAAATTAA AGCCGATGACCTGATCCCTTTCTTGGTTAAATTCTATATAATGACAGGTCTCACCCCTTTTTTAACGGATGGTCAGTCGCACCTGAACCACCAGTCTTCTAACCTTTGGATTTTCTATCA TCCAGTATACCAGATCCCGAGGGAAAACTTCCCCAAGAGTCGCTGGGCGCTTTTGACTTAAAGAAGTGTTTCTTTGAGAAAGGCTTCTCGTGAGTAAATATTCTCATGCCATGGCATGGG TTTTTTCTTTTCTTTTGCTTTTTCTCTTGTCTATGTTACTCTACCTGTTTTGCGTAATCAGCATAATTTAAACGGATAAATCTGTGTTTATTAATATGCTACAAGCTTTTCCATTTCACC CGATTTTCTCTGCTGTATACTTGAAGGTTATAAGTTTTTTCCTTGTGCATGTATGATGTTCCTGGGGCCACTCAGCTCAAACTCCTCATGGGTAGGATGTAATTTGGTCCTCTGGTCATT CTAGTCGAAAAATAACAGTCCAGCGTAGTCTGTGTATAGTAGAAATGATGCGCGTGAAGATGGTGCAAAGTCAGATTATGCTCTGTTCATATGATTTGATGTGGACCTACCAAGTCTTTT ATTAAAGTCAGATTATGTCTCATGTTTACTGGGCACACGTTAGATGTGCGCAGAGTTCTTTTATAAAAAAAATAATAATGTCATGGGAATTCCGATAATGATGGGTTTTGCAGTGTATCA GAGCTTTTCCACCGTCGAGAACTTGTGATATTTTTTGCAAACGTTCCATGTTGCTCTTATGTCTAGTATGTATGCCTCTGCATTCCTCTCCTCTATCGTCGACGATCAAGTTTGCTTTGC TCAAATATGAATGACAAAACGCTTTGATTATTCCTTCGATTATTCCTGTGTTGTTTGGACCTGCAGTGTCAATAAAAGATTTTGGAAAGCCGTTGAACCTTGTCGAAATCGTCCAAATGC TAAAGCCTAGAACGTCGTTTTTTGGCAAATTTGTCTTGTTATGTCAGCTGTTATTCAAGAGAACTTGCGGCGGCACGAGTCCGTCTCATGCCGCCGCGGGTTTTCTGTTGCGGCCATCCT TTTGCTGCTGCAGTGTGAACTCGAGGGTCAAATTGCAGAACACAAGAACTGGTCACATTGTCTGGAGCTCATACGCTGGGAGGAAAAGGCTTTGGGAGCCCAATCGTCTTCGACAACACC TACTACAAGATACTCTTGGAGAGACCGTGGGCGTCGTCCTCCGGTGAGTAGCCAGATGCCCGTCTGTGCAAATTGACCGCATTTATTCTCCTCTGGGGATCTCATTTGGCGGCGCTTTTT TCCTCCGCGGACTGCGACTTATGGTGGCCGGGCCTTTCTGCTGCAGGCTCAGGCTCTTCCATGTCGAGCATGGTCGGGCTCCCATCAGACCATGCGCTCGTCGAGGATGCCGAATGTCTG AGGTCCCTACTGATGGCATTGGTCTCTCTTTCATTCCCGGCGCACTGCACCGGGGGGCTTGATGTCTGAGGCGCCTTGCTTGCTGTTGCAGGTGGATCACGATTTACGCAGCTGATGAGA GAAAGTTTTTTGAAGATTTCAAGAGGGCGTACATTAAACTGGTCAACACCGGCGCGTCGTGGAGAAATGTCTAG |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGACGACCGCGGCGACCACCGCCGTCCCCAGCCGCTTCCCGTTCCCACGTTCAAGACGAACAGCGCTTCGGCATCCAGGAGACCCACGGCCACGCTGCCCACTCAGACGCCGCCGGACG CCCACCGAGTGCCTGCGAGGGGAGCAAGTGGAGAACCCCTGCTCGTCCTCATCCTCCTCGGAAGGACACAGGGGCACAGTACATGATGTCTGTCTTCTCATATTTGCTGTCAGCAGAGCA GTAGAGTCTGGCGAATCTTTGCTTGTTCGAACTGAGGTAAGGAAAGTCCTTTCAAAGTCCAAAGCTCCTGGGGTACTTCGGTTGGCCTTCCATGATGCAGGGACATTTGACATGAATGAT GGCACAGGTGGAATGAATGGCTCAATTATTTTAGAACTTGATAGACCTGAAAATGCAGGTTTGCGTAGATCTGTGAAGGTTTTGGAAAAAGCAAAGAGCGAGTTGGATAAGGTTCAGAAT GTGTCCTGGGCTGATTTGGTTGCTGTGGCTGGTGCGGAAGCCGTTTCGTTATGTGGAGGTCCCGTCATTCCTATTCAGTTAGGCAGGATGGATACAAGTATACCAGATCCCGAGGGAAAA CTTCCCCAAGAGTCGCTGGGCGCTTTTGACTTAAAGAAGTGTTTCTTTGAGAAAGGCTTCTCAACACAAGAACTGGTCACATTGTCTGGAGCTCATACGCTGGGAGGAAAAGGCTTTGGG AGCCCAATCGTCTTCGACAACACCTACTACAAGATACTCTTGGAGAGACCGTGGGCGTCGTCCTCCGGCTCTTCCATGTCGAGCATGGTCGGGCTCCCATCAGACCATGCGCTCGTCGAG GATGCCGAATGTCTGAGGTGGATCACGATTTACGCAGCTGATGAGAGAAAGTTTTTTGAAGATTTCAAGAGGGCGTACATTAAACTGGTCAACACCGGCGCGTCGTGGAGAAATGTCTAG
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Retrieve as FASTA
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