Entry information : GbPrx08(Ginbil_Gb_14034)
Entry ID 1324
Creation 2005-06-21 (Christophe Dunand)
Last sequence changes 2015-02-15 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-12-06 (Christophe Dunand)
Peroxidase information: GbPrx08(Ginbil_Gb_14034)
Name GbPrx08(Ginbil_Gb_14034)
Class Class III peroxidase    [Orthogroup: Prx008]
Taxonomy Eukaryota Viridiplantae Streptophyta Ginkgoopsida Ginkgoaceae Ginkgo
Organism Ginkgo biloba    [TaxId: 3311 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GbPrx08
start..stop
S start..stop
GbPrx76 568 0 1..320 34..358
GbPrx09 509 0 13..320 10..316
PtaPrx43 490 1e-176 1..320 1..318
PabPrx111 486 4e-175 17..320 12..315
Literature and cross-references GbPrx08(Ginbil_Gb_14034)
Literature Brenner,E.D., Twigg,R.W., Runko,S.J., Katari,M.S., Dedhia,N.N., O'Shaughnessy,A.L., Balija,V., Martienssen,R.A., McCombie,R.W., Benfey,P., Coruzzi,G. and Stevenson,D. Expressed tag sequences from Ginkgo megasporophyll
EST ref. GenBank:   CB094345.1 [3' end]
Protein sequence: GbPrx08(Ginbil_Gb_14034)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   320
PWM (Da):   %s   35038.59 Transmb domain:   %s   i9-31o
PI (pH):   %s   9.84
Sequence
Send to BLAST
Send to Peroxiscan
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MAAYLSPTRL LMMSFCILFF CTAYGWQLSS TFYHKSCPQV LTTVRAAVRA AVAKEPRMGA SLLRLHFHDC FVNGCDGSIL LDDTSTFTGE KTAVPNNNSA RGFEVVDDIK SRVEKVCSGV  VSCADILAIA ARDSVVQLGG PTWTVLLGRR DSRTASLSGA NNNIPAPNSS LANLISKFQA QGLSTKDMVV LSGGHTIGQA RCTSFRARIY NESNIDTAYS NSLRTKCPRT GGDNNISPLD 
FMTPTRFDNN YYVNLKARKG LLHSDQQLFN GGSTDSQVTK YSNHPNRFEK DFTAAMVKMG NIKPLIGRNG EIRKSCRKRN * 

Retrieve as FASTA  
Remarks Complete sequence from genomic, RNA seq (gba_locus_7382_iso_1_len_1259_ver_2, missmatch) and 1 EST (hx18h02.b1.b from the Vicogenta database).
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCCGCCT ATCTCTCTCC AACTAGATTA TTGATGATGA GTTTCTGCAT CTTGTTCTTT TGCACTGCTT ATGGCTGGCA GCTGAGTTCA ACCTTTTATC ACAAGTCGTG TCCACAGGTC  TTGACCACCG TTAGAGCTGC CGTCAGGGCT GCAGTAGCAA AGGAGCCTCG AATGGGTGCA TCCTTGCTCC GTCTTCACTT TCACGACTGT TTCGTTAATG GCTGCGATGG ATCTATACTG  TTGGACGACA CCTCAACATT TACTGGCGAA AAGACGGCAG TTCCCAACAA TAATTCAGCG AGAGGTTTCG AAGTGGTAGA CGACATTAAG TCTCGAGTAG AGAAAGTTTG TAGCGGAGTG  GTGTCTTGTG CTGACATTCT GGCCATCGCT GCGCGTGATT CTGTTGTACA ATTGGGAGGT CCAACATGGA CAGTGCTGCT GGGAAGGAGA GACTCGAGAA CTGCGAGTCT GAGTGGAGCC  AACAACAACA TCCCAGCGCC CAATTCGAGT CTCGCCAATC TCATCTCTAA ATTCCAAGCG CAGGGCCTCT CTACTAAGGA CATGGTTGTG CTTTCAGGAG GGCATACGAT TGGCCAAGCG  CGGTGCACCA GTTTCAGAGC TCGTATATAC AATGAATCCA ACATAGACAC CGCTTACTCT AATTCGTTGC GAACAAAGTG TCCGAGAACC GGAGGTGACA ACAATATTTC GCCCTTGGAT  TTTATGACAC CCACCCGCTT CGACAATAAC TACTATGTAA ATCTGAAAGC TCGGAAGGGA CTTCTCCATT CTGATCAGCA ACTCTTTAAT GGCGGCTCTA CCGATTCTCA GGTTACCAAG  TACAGTAATC ACCCGAATCG TTTCGAAAAG GACTTCACTG CGGCCATGGT AAAAATGGGA AATATCAAGC CTCTCATCGG TAGGAATGGT GAGATCCGAA AGAGCTGTCG AAAGCGCAAT 
TAA 

Retrieve as FASTA