Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
44 |
PWM (Da): |
4457.32 |
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PI (pH):
| 10.03 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MASASAQSPK SVHDFTVKDA RGNDVNLGAY KGKALLIVNV ASQC
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Retrieve as FASTA
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Remarks |
Partial sequence from genomic. Only exons 1 and 2 due to N in the sequence. incorrect prediction from Phytozome |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTTCTG CATCAGCCCA GTCGCCCAAG TCGGTTCACG ACTTCACCGT CAAGGTACCT CGAAGATGGG CCTTGGATGA TGTTGAGTAT AGTTTTGGGT TTTCGAGTCC CTATTTCTTC
TCGATGGCTC TGGTGTTCAA TAGTTTTTCG GTAGATTTAC TGCTGCTTGG GCTATGCGAC ATTTTGATTT GCTGAAAGTC AGAGGCCGTT CGGTGATCGT TTGTTTGTAA TACGAACCAG
GACAGTCAGG ATGATTTTGG GTTCTATGAA AATGGGTTTG AGGGACTTGA CGGGCAATCT GCAAGATATA TGTCTGCAAG TTCTTTATTC CTAAAGTGAT AGGGAGAGGG CATGTGAGAA
TCACTGAGAG TAGATTGACT ATATGTTGGT AACATGATGT ATTCCGAGAC CAGGATGAGA AATCTAAGAT TTGAAGGTGC AGTTTTTTTT ACCATATGCG TGCTTGGGGT AATGGTATGT
TAATAAACTC CTTGACGTAA TATGTTTAAT TATGAGTTTG ACTTCATTTC ATCTTGCAGC TGCTAGATTT AAGGGATGTA GATCTTTTCT AAGCAATAGG TTTGAAAATA CTTTCCAGTT
TGAGATTTGG GAGATTTGAA CTTTTAGACT TAAGATGTTT ATTTTAAACT AAGGTATTGA TAATTTTTTT CATCCCTGTA AAAACTATGC GTGATATATC TTGGATTTAT GTATTGGCTA
TCTAAATTTG AAGGATCAAA AAGACTGACC AAGGAAGAGT TGGTGAATGG GTTGCATTTT TTGACCACCA AAATGAATTT GTCCGGACTG TGCTTTTCGA TTACGACGCA AAATCAAAGT
TGATGCGTCC TTAATTATGA GAGATCGATT GTCATGTCCA TGGTACATTA TCCATAATTT TTTCGATCAT CCTGTCCTAA ATGATAGATT ATTTCTCAAT GTAATATTAT GAAATTTATT
TGGGAGAAGG ACATGGTCAT CTTGTTCCTT TAGGGATTAA TACTTCCTGT AGATCTACTT GATTTAAATT CCTGGGTTCA TCTGTGTGAA TAGAAATGTG TGCCTTTGTA TGTATGCTTA
TATGTGATTT GTTTGTGTGA CTGTGGCCAT CAATGTTCAT GTTCAGATGC GCATGTGAAT ATATGATTGG CTGTTATTCA TATACTTATA TCTTATGTAT ATATGTATAT ATATAGATAT
TTATGCACAT ATATATCTAC ATACACGCAC AGGTTAATGT ATGTATATAT GCAGCTACCA TTTGTCTGTG TATCATTGAA TGCATTGCCT GCCTTGGATA TCATGGTCTT GCTCCTTAGG
GATCAGAGCT TTAGTTGAAG ACATGCTTTT ATTTTATATA TATTCTGGGT TAATTCGTGG GATATACTTC ACGTTTGTCT CTGAACTCTT TACTCCCAGA AAGGCATGTT ATGGAAATCG
ATGGAGTTAA TAACCTTATT ATTTTTCTTC ATTGTAAATT CCTCATGTAA GGTCTGAATG GATTATCTGT TTGCCTTTTG GATAAGGAAA CTAATCAGCT CTCATACAGG ACGCCAGGGG
CAATGACGTC AACCTAGGGG CCTACAAAGG GAAGGCACTT CTGATCGTCA ATGTTGCATC ACAATGGTAT CGTCTCTGTC TTCTCTCTTT TTAGAAATCT TGTTGGAGAG TTTAAATTAA
AGCGTTAGTT CATGATTGTA GTG
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTTCTG CATCAGCCCA GTCGCCCAAG TCGGTTCACG ACTTCACCGT CAAGGACGCC AGGGGCAATG ACGTCAACCT AGGGGCCTAC AAAGGGAAGG CACTTCTGAT CGTCAATGTT
GCATCACAAT G
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Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTTCTG CATCAGCCCA GTCGCCCAAG TCGGTTCACG ACTTCACCGT CAAGGACGCC AGGGGCAATG ACGTCAACCT AGGGGCCTAC AAAGGGAAGG CACTTCTGAT CGTCAATGTT
GCATCACAAT G
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Retrieve as FASTA
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