Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
44 |
PWM (Da): |
4471.33 |
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PI (pH):
| 10.03 |
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Sequence 92
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MASASAQSPKSVHEFTVKDARGNDVNLGAYKGKALLIVNVASQW |
Retrieve as FASTA
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Remarks |
Partial sequence from genomic. Only exons 1 and 2 are present due to N in the sequence. Incorrect prediction from Phytozome. |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCTTCTGCATCAGCCCAGTCGCCCAAGTCGGTTCACGAATTCACCGTGAAGGTACCTAGAAGATGGGCTTTAGATGACCTTTAGCACGATTTTGGGTTTTACGGTCCCCTATTTCTT CTCGATGGTTCTGGTGTTTAAGAATTTTTTGGAAGATTTGTTGCGGCTTGAGTTATCCGACATTTTTTTTGGCTAAAAGACAGATCCGTTCCGTGGTTGTTTTTTTGTCGTGGGAATCAG GACGGTCAGGATGATTTTGCGGGTTTGAGGGATCTACCTGGCGATCATCATGATATGTTCTGGAGTTTGGCATAAAGAATTATATATCTGCAAGTTACTTTGGCATAAGCAGAGAGGACA TGTGAGAATCGCTGAGATTAGATTGACTATATGTTGGCATCATGATGCATTCCAAGACTAGGATGAGAAATCTAAGGTTTGGAGGTGCAGCTTTTTCACCATATACGTGCTTGGGGTAAT AGTATTTTAATAAATTCCTTGAGCTAATATATGCGATTATGAGTTTGACATCATTCCATCTTGTAGCTGCTAGATTTAAGGGATGATTGGTTGTTATATATATGCAAATATTGTTATGTA CATAGGCATATATATGCATATGGACGTATATATGTACGTACATGCACATCTTAATGAATGTATATATGCAGAGTGTGCAGCATTGACTGCAATCCCTGTCTCAGATATACGGCCGCATTT AATGCAGAAGAGGAGCTCTCCGTTCATGAGAGGGAGAATCAGTCCAATTGCAGACCTTATATGTCGACAGATGAAAACGACCCACTTATGAGCGGATAGAGGTGGACTAAAATGGCCTGA CGACGGGATGAAGAGGAAATGGCCTAGCTGACTGTTTCTCACATAAATAACCCACGAGGGAAAAATTTCAGGGCACATTTTCAGTGGTCCATCAAAGGGTCCTAGGTCCTCCTAGGTGCC GGTAAATTGAGGGCAAGATCTCTTGTTGGGTTAGGTGAGTACTTTGAGGGCCAAGTTCAGAGATCTATTATTATTTGGGTTCTTGGCGAGAGTTCTTTTGTGATTTTTTTTCTCATCTAA TTGAACTTTAGTCATCAATCATGAACTTAGGAGGCCACTTTGGAACCACCTTAAATTTTTTGTGTTGGTGTTTTTGCTGTAAGTTGATCTTTCTCTTCTTTCCTACTTCATGTCGTACAG ATCATAAGAGTTATTTTGTGATTTTTTCTCATCGAATTGAACTTTAGTCGTCACTCATGAACCAAAGGAGGCCGACTTTGGAAACACATTAAACTTTTTGTGTTGGTGTTTTTTCTGTGA GTTGATCTTTCTCTTCTTTCCTACTTCATGTCGTACAGATCATAAGAGTATTATCCTGCAAGTTCATAACAGAATTTTTCTGTAACATGAAAGTGTGCCTTTTTTTATATATATTCTAAG TTCATTTCAAGAAAAAACTTGTTTTTCTTTGATGTGTTTTGCATTTGGCTCTAAACTCTTTACTCCCAGAAAAAAATATTATGGAAATCGATGGAATCAATAACCTTGTTATTTTTTTCT TCATTGTAAATTCTCTACACCAAGTCTAAATGGAAACCTCAGCACCTACAAAGGAAACTAATCAGCTCTCATACAGGACGCCAGGGGCAATGACGTCAACCTAGGGGCCTACAAAGGGAA GGCACTTCTGATCGTTAATGTTGCATCACAATGG |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCTTCTGCATCAGCCCAGTCGCCCAAGTCGGTTCACGAATTCACCGTGAAGGACGCCAGGGGCAATGACGTCAACCTAGGGGCCTACAAAGGGAAGGCACTTCTGATCGTTAATGTT GCATCACAATGG |
Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCTTCTG CATCAGCCCA GTCGCCCAAG TCGGTTCACG AATTCACCGT GAAGGACGCC AGGGGCAATG ACGTCAACCT AGGGGCCTAC AAAGGGAAGG CACTTCTGAT CGTTAATGTT
GCATCACAAT GG
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Retrieve as FASTA
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