The peroxidases and oxidases database
Entry information : SpolGPx03 ( Spipo6G0008900)
Entry ID 13257
Creation 2015-06-19 (Christophe Dunand)
Last sequence changes 2015-06-19 (Christophe Dunand)
Sequence status complete
Reviewer Catherine Mathe
Last annotation changes 2016-03-07 (Catherine Mathe)
Peroxidase information: SpolGPx03 ( Spipo6G0008900)
Name (synonym) SpolGPx03 ( Spipo6G0008900)
Class Animal glutathione peroxidase    [Orthogroup: Gpx1002]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Araceae Spirodela
Organism Spirodela polyrhiza (great duckweed)    [TaxId: 29656 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SpolGPx03
start..stop		 S start..stop
AoGPx02 275 1.81e-96 1..174 1..171
ZmGPx02 270 3.23e-94 1..173 1..170
VvGPx05 269 3.93e-94 1..173 1..169
NtGPx05-1A 267 3.97e-93 1..174 1..170
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 716285..716350 66 N° 2 715687..715763 77 N° 3 715430..715491 62 N° 4 714616..714734 119
N° 5 712431..712598 168 N° 6 712247..712279 33  
complement(join(712247..712279,712431..712598,714616..714734,715430..715491,7156 87..715763,716285..716350))


exon

Literature and cross-references SpolGPx03 ( Spipo6G0008900)
DNA ref. Phytozome 12:   pseudo6 (716350..712247)
Cluster/Prediction ref. Phytozome Gene 12:   31506028
Protein sequence: SpolGPx03 ( Spipo6G0008900)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   174
PWM (Da):   %s   19427.01  
PI (pH):   %s   9.83
Sequence 216
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MGASQSSRAATKGNSIHEFSVKDNHGNEVSLGRYKGKVLLVVNVASKCGLTNTNYTQLTELYNKYKSKDFEILAFPCNQFLNQEPGTSQQAESFACERFKAEYPIFQKVRVNGPETAPVYKFLKASKTGLMGSRIKWNFTKFLVDKDGVVIRRYGPGTEPLSIEKDIQKALGEI*

Retrieve as FASTA  
Remarks Complete sequence from genomic.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGAGCGTCTCAGTCTTCCAGGGCAGCAACCAAGGGGAACTCCATCCATGAGTTCTCTGTCAAGGTAGGGCACGAGAAGTGCTTCTTCTTCTCCGTGTACTTGTTTTCCGTTTACTTT
TCTAGATCCGATCGTTCCAGGAGCAGGGTCGGAAACGTTTAAGTTGAAGTTTTGATCAGGGAAGTGAGAGCGAGAATCCAAAACACCAGGTGATGTTGCGGAGGGCTTGCCTTGCTTTCG
CTGATTTTCCCGAAGGAGTGGATGATGATGTGGTGTTGTTGTTGAGGAAGGGGTTGGAGGGGACGAGAGGAATGGTCTTGATCTCTTTCTTGTATATTTTTCTCTGTCGAAGATGGCAGG
GGGGGTCTTACACAAATATGGTCTAATTTCCATGGCAAGAATGGAGGGCAAAGAAAGAAAATAAGAAAGAAAGAAGGAAAGAATTTGTTTCATCTTGCACCGAAAGATACGGACGGTCTG
TTCTTGAAAATTTCCTATTAGCCCTATCGTGAGTGCCCTTTTTTAATACATCTTGTGACTCACGAAGTCTTTTTTGTTACTTATTGCCGCAAACTGCCAATCATCAGGATAACCATGGAA
ATGAGGTCAGTCTCGGGAGGTACAAAGGGAAGGTTCTCCTCGTCGTCAATGTTGCATCCAAATGGTACAAATCAGTCATGCCTTTGATTGTCTTGAATTCTTCTCTTTAAACCTGTCTTC
TCTCCTTTTGAATTAATAATGTGACCTATTTTCTGTTTTTTTTTCTGATAGAGAGAAAACTGAAAAAATTACTTTTCCTCTGAAAGATGGTTTTTTTATTCTTCTTTCTTCTCTGCTTTT
TTTTTTGATGAACAAACAGCGGGCTTACAAACACCAACTACACCCAGTTGACAGAGCTTTATAACAAGTACAAGAGCAAAGGTTAGCTATGCCGATTTGCCTCTCTTTCTCTCCCTCCTT
GCTCTCCCCTCTTCATTCTTGGATTTTTATTTCTTTCAATTACTTGACAAATGACTTATCTTTATGCAACGTGCGTTGGCGTCACTAGAGTAAAATGTGCGTCGATTTTTGTTTGAAAAG
ACTCCTGTTCTACTTACGTTTCTTGAAGATTCTTGTGGAGAATGAATTATAGACATGATGGGTTTCTTCCCCATATTTTTGGATGGCTAAATCATTCAGCAGTTTATTCAGCTTCTTCTT
CAGACTAATATCTATCTTAATTTTTATGAAGATAAGTAATTATGTGCTGACATTTTCCATTTCAGAGATTGTGTTTTCTTCATTATAGAAGTTATTTATTGGTTTTCTCCAGAAGATAAT
CTATCCCTTGAAATATTTTCTATGAAAACAGATCAAATTTTACTTCTAAAATTGAACATTTTTACTTTTGAGTTTTTTGTCCTAATCTCTCACTCAATGTGGAGTACGTCGTTATTCTCT
TATATGTCTAACTTATGCCGCATGCAAAAAGTAGGATTTTACCAATCCTGTTTTCCCAAACGATTCCACACTGCTTGGGATTTAGTAATTTTTTTTTATTTTTAGCAAGGCATAATTTTG
ATGTACTCTTCTTTTCTTTTATCTTGATTTATTTTATCTCGTTGGGTGTGCAACAGACTTCGAAATTTTGGCCTTCCCATGTAACCAATTCCTGAATCAAGAACCTGGAACAAGCCAACA
GGCAGAAAGTTTTGCATGTGAGAGATTCAAAGCTGAGTATCCTATATTTCAAAAGGTAAAGTTACTCCCCAGTTTCTTTCCCTTGTTTGATGGTGGTTGAAATGTATAACAACTTAGAAC
GACCTCATCAAAAGATTATTAAAGAAGAAATGTGATAATAGCGCGCATAATAGTATTTGCCTCTAGCATCCTCAAAATTCATTGCTTCCTTTGGTTTAGATGATGATATGCTGTTCTGTT
AATCAGTTTTCCAGACTATTAAGCACATTCTGCTTATGAAGTCCAACAACACAATGATCACATGAAGGCTTCCCTCTTATTTGATAATTTTATTCTGAATCTGTAGAACATTGTGATGCG
TCAATGTTCTGATTATTCTGCTTTGTGGATTGCAAGAAACGAAAACCGAAAAGTATATTTTGGATTTTTTTTTAAGCTCTTCCAGATGGAAACCCTACCTACTGTATTCTTATATTCCTA
GACTTGTTTGCCCCTTTGTTTCAGCCACTTTCCCTTTAATCGCATTTGCAAAAGATTGAACATGTTGACATGTGCGAACATGAGACTGCAGTAAAACATTCATTTTAGGTATGTCATTAA
TTTGAGCGGTTTCGTAATTTTAATAGTTCTGGCAATAAAATATTTTCCCTTCCTGCCATCTACTCTCCTGGGACTTCTAAGTGGACATTCTCTTATTGAAAGGTACCTAGGTTTTGCATG
AGAAAATTTTTGCTGGACAGAGAATTCTCCAAACAGTATTTCATAGGTTTTTGTTGCTTAGGAAGGCCTCATTTTTTAGAGTTGACCGTAGCACTGGGTCAAGCATTTGTTTATACCTGC
ATGAAACCCACTTAGTGATATATAATGAATTCATGAAAACCTCAATGATATATGTCGTTTCGTGCTGTGAATTTGGAGTTTAACAGGCCCCAAATTCCTGAATTTGCAGTTTTTTTTATA
TGTGCATGAAACCCACCTAGCTAATTCGCTGTTTCTTTCACTTTGACAGTCTTTTGGCATTAAGCCACTGATAGATATCTTGCTTCATCCCTCTTAATCATTGATATCTTCATTACTGCC
ATCGAGGGTTATCCTTTTCTTACTGCTTGAATAATTTGATATTTTTATCCTTTTCTGTATCTTTTTATGTCGTGAAATATATCCTTTGTCGATTGAAGTGGTTGGAAACAAAATATTTCT
ATTTTAAATAAAATTATTTAAGCTCTCTTCTTTTGGGGTCAAAATGGTGACAAGAAAAGATCATGGTTTTAATTGTTCTGAAGGCAGAAATGATTACTTTGTAACATGTTGTACAATATA
GCACGTGCACATCACCACTGCCAACTAGTGAACGAATAACGTAAAAATGACTGGAGGAGGAATATCATTGCACAATAAATGAAAAATATTTCCATGCGAGGCAGTGCGACCAGTTGATGC
TTCCTGCTCACCGCATCTGCCCTTCTTTTTTCTTCCTTTGTATATTTATTTGAAACAATCAAACAAACATAGTGAATTAGACACCGCGGCCAGAAGATAACATGAGAATTCTTCTTCAGC
TATTGATTAGCTCCCAAATTACTGTTATATTTGATTTTATTAGCCCTTCTTCGGTTCAAAAATACAAAATCAAACTTCAAAAAATGATTCCGTGGCCGTTTCCCTGTGTACAATAAACTC
CCTATTTGTCATGTGTGTATAGACAGAAACAAAGAAATGATGGGGAGGGATGGGGGGACGGGAAAGGTGAAGAAGCATAGAGTGGACAGTTTATCTAATTCATCTATTGTAGCATCTGGA
TTGCTACCTTTCTTGCACTTTATCCTTTGGTAACCCTTGAATAATCTTCTATTTTCTGCTTCACTCCATATGCATATGCAACAGAAAAAATTGTCTCACTCCCAAAGTTGTCTAGTTGTC
TGCATTTATTATTATATCTGAACTAAAAAGTTCTCTCATATATCGTGTTCATCTGCGGTGTCTATTTTTGCAATGCAACCGTATCAGATTTTGGGCAGGCTTTTCCACAAGGATGAGAAC
AAGAACTCTAGCTAGTTTTCCCTCTTTTACAGGTTCGAGTGAATGGTCCGGAAACAGCCCCGGTCTACAAATTTCTCAAAGCAAGCAAGACTGGCCTCATGGGATCTCGGATTAAGTGGA
ACTTCACCAAGTTCCTGGTTGACAAGGACGGCGTTGTCATCCGTCGTTATGGTCCAGGGACTGAACCCTTGTCCATAGAGGTCAGAAGAAACACACCCTATTATAATTCTTATGTATGGG
TGAACTACCTAAACATTGGAGACGTCTGATTATTTAAAGTTATTTATTTCATTCTCTGAGTTGTTGTGGTTCTCTATCGCTCCATTAATGACCTTTTATTGTGAACTTCAGAAAGACATC
CAGAAGGCCCTGGGGGAGATCTAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGAGCGTCTCAGTCTTCCAGGGCAGCAACCAAGGGGAACTCCATCCATGAGTTCTCTGTCAAGGATAACCATGGAAATGAGGTCAGTCTCGGGAGGTACAAAGGGAAGGTTCTCCTC
GTCGTCAATGTTGCATCCAAATGCGGGCTTACAAACACCAACTACACCCAGTTGACAGAGCTTTATAACAAGTACAAGAGCAAAGACTTCGAAATTTTGGCCTTCCCATGTAACCAATTC
CTGAATCAAGAACCTGGAACAAGCCAACAGGCAGAAAGTTTTGCATGTGAGAGATTCAAAGCTGAGTATCCTATATTTCAAAAGGTTCGAGTGAATGGTCCGGAAACAGCCCCGGTCTAC
AAATTTCTCAAAGCAAGCAAGACTGGCCTCATGGGATCTCGGATTAAGTGGAACTTCACCAAGTTCCTGGTTGACAAGGACGGCGTTGTCATCCGTCGTTATGGTCCAGGGACTGAACCC
TTGTCCATAGAGAAAGACATCCAGAAGGCCCTGGGGGAGATCTAG

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGAGCGT CTCAGTCTTC CAGGGCAGCA ACCAAGGGGA ACTCCATCCA TGAGTTCTCT GTCAAGGATA ACCATGGAAA TGAGGTCAGT CTCGGGAGGT ACAAAGGGAA GGTTCTCCTC  GTCGTCAATG TTGCATCCAA ATGCGGGCTT ACAAACACCA ACTACACCCA GTTGACAGAG CTTTATAACA AGTACAAGAG CAAAGACTTC GAAATTTTGG CCTTCCCATG TAACCAATTC  CTGAATCAAG AACCTGGAAC AAGCCAACAG GCAGAAAGTT TTGCATGTGA GAGATTCAAA GCTGAGTATC CTATATTTCA AAAGGTTCGA GTGAATGGTC CGGAAACAGC CCCGGTCTAC  AAATTTCTCA AAGCAAGCAA GACTGGCCTC ATGGGATCTC GGATTAAGTG GAACTTCACC AAGTTCCTGG TTGACAAGGA CGGCGTTGTC ATCCGTCGTT ATGGTCCAGG GACTGAACCC 
TTGTCCATAG AGAAAGACAT CCAGAAGGCC CTGGGGGAGA TCTAG 

Retrieve as FASTA