Entry information : GmarCIIBB06
Entry ID 13287
Creation 2015-06-30 (Christophe Dunand)
Last sequence changes 2017-04-26 (Catherine Mathe)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2019-05-10 (Catherine )
Peroxidase information: GmarCIIBB06
Name GmarCIIBB06
Class Other class II peroxidase type B    [Orthogroup: CIIBB002]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Cortinariaceae Galerina
Organism Galerina marginata    [TaxId: 109633 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GmarCIIBB06
start..stop
S start..stop
HsubCIIBB08 542 0 1..357 1..358
GmarCIIBB02 540 0 1..357 1..352
GmarCIIBB01 539 0 1..357 1..352
HsubCIIBB04 538 0 1..357 1..359
Gene structure Fichier Exons


exon

Literature and cross-references GmarCIIBB06
DNA ref. JGI genome:   scaffold_20 (723249..721497)
Cluster/Prediction ref. JGI gene:   101039
Protein sequence: GmarCIIBB06
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   374 (354)
PWM (Da):   %s   39428.97 (37183.7)  
PI (pH):   %s   4.7 (4.61) Peptide Signal:   %s   cut: 21 range:21-374
Sequence
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MVFRNALSAFVFALPLLANGLRTKRATCPDGIHTAINAQCCSLFPVVDDLVENLFEGECGDGAHGALRLLFHDAIGISTTAGGGGADGSIAVFNETELTFHANTGIDDVFDALGPFLQKH
SNVLSPGDFIQLAGAVSLVQCPGAPRIQFFKGRAQPKAASPPNLVPEPFDSVQSILARFQPLGFTVPEIVAIIGGSHSIAGADDIVPNQQGVPFDQTPDVFDSQIFVDVQLRGTLFTGQG
GQQGEVQSAVQGLVRLQSDHLLARDSATNCEWQSNVNNHAKLVSNFASGVQKLALLGQVKSQLTDCSEVIPAAIPFSGASPTLPPGLKMTDIEQACATASFPILPTQPGPPTTVPQMCAV
FLTPYLCFFLKNFL*

Retrieve as FASTA  
Remarks Complete sequence from genomics (12 introns). Incorrect prediction from JGI (two ORF have been fused).
DNA
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CDS
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