Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
327 |
PWM (Da): |
35440.69 |
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PI (pH):
| 7.95 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MQLSAWKAPS FVPLYSTKCA PSGRGLEGRR CVGPSVEDVV RKEMVRALSV APSLAGPLLR MHFHDCFVRG CDGSVLLDST ANNTAEKDAK PNLTLRGFGF IERVKTAVEK ACSDTVSCAD
VLALMARDAV WPSKGPFWAV PLGRRDGRVS ISNETDQLPP PTGNFTELAQ LFGAKGLDTR DLAVLSAGHT IGTSSHCFSF SDRLYNFTGL DDARDTDPEL DRAYMARLRA KCASLDDNTT
LVEMDPGSFR TFDLGYYANV AKRRGVFHSD AQLLADPSTR AYVLRHATGA HRDEFFADFA ASMVKMGAVG VLTGGQGEVR KKCNVVN*
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Retrieve as FASTA
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Remarks |
Pseudogene or partial sequence from genomic (chromo 8, introns 1 and 2). No EST. Part of the PS is missing. Incorrect prediction from Phytozome (small exon in 5', with any match). Segmentale duplicated (GRMZM2G410175). |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGCAGCTGT CAGCTGTGAG TACTGAATTG ATTGGCTGAT ATTTCCAAAC GATTCTGGGT CAGACAACTC GGAACAGTGG AAGGCACCTA GCTTTGTACC ATTGTATTCA ACCAAGTGCG
CACCAAGTGG GCGGGGCCTT GAAGGCCGAA GGTGCGTGGG CCCCAGCGTG GAGGACGTCG TGCGGAAGGA GATGGTGCGC GCGCTCTCCG TCGCGCCCAG CCTCGCCGGG CCGCTCCTCA
GGATGCACTT CCACGACTGC TTCGTCAGGG TACGGGTTGC GTTTGTACTG TAGCGGCTTC GATGCACTTT CTTGTAGGCT TGCATTGCTA GCTAGCTAAC CCGGCCCGCC GTACGTTTCC
TGCGTTGCTC GCCGATCCGT GTCCGTACGT GTGCAGGGGT GCGACGGCTC GGTGCTCCTC GACTCCACGG CGAACAACAC CGCGGAGAAG GACGCGAAGC CGAACCTGAC GCTGCGCGGC
TTCGGCTTCA TCGAGAGGGT CAAGACCGCG GTGGAGAAGG CGTGCTCTGA CACCGTCTCC TGCGCCGACG TGCTGGCTCT CATGGCCAGG GACGCAGTGT GGCCGGTACG TACGTACTAC
GTACACACGC ACCAAAGCAT GCATATACGT ACACGTACGT ACGTTATTAT GAGAATCTCT TCTTACTGGC TAGCTGTTTG TTCTCACTCG CTCAGAGCAA GGGCCCGTTC TGGGCGGTCC
CGCTGGGGCG GCGGGACGGC AGGGTGTCCA TCTCCAACGA GACCGACCAG CTGCCGCCGC CCACGGGCAA CTTCACGGAG CTGGCCCAGC TTTTCGGCGC CAAGGGCCTG GACACCAGGG
ACCTGGCGGT GCTGTCGGCC GGCCACACCA TCGGCACGTC GTCGCATTGC TTCTCCTTCT CGGACCGCCT CTACAACTTC ACGGGCCTGG ACGACGCCCG CGACACCGAC CCGGAGCTGG
ACCGGGCGTA CATGGCGCGC CTCCGCGCCA AGTGCGCCAG CCTGGACGAC AACACCACGC TGGTGGAGAT GGACCCCGGC AGCTTCCGGA CCTTCGACCT GGGCTACTAC GCCAACGTGG
CCAAGCGCAG GGGCGTCTTC CACTCCGACG CCCAGCTGCT CGCCGACCCT TCCACCCGCG CCTACGTGCT CCGCCACGCC ACGGGTGCCC ACAGGGACGA GTTCTTCGCC GACTTCGCCG
CGTCCATGGT CAAGATGGGC GCCGTCGGCG TGCTCACCGG CGGCCAGGGC GAGGTCAGGA AGAAGTGCAA CGTCGTCAAC TAA
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGCAGCTGT CAGCTTGGAA GGCACCTAGC TTTGTACCAT TGTATTCAAC CAAGTGCGCA CCAAGTGGGC GGGGCCTTGA AGGCCGAAGG TGCGTGGGCC CCAGCGTGGA GGACGTCGTG
CGGAAGGAGA TGGTGCGCGC GCTCTCCGTC GCGCCCAGCC TCGCCGGGCC GCTCCTCAGG ATGCACTTCC ACGACTGCTT CGTCAGGGGG TGCGACGGCT CGGTGCTCCT CGACTCCACG
GCGAACAACA CCGCGGAGAA GGACGCGAAG CCGAACCTGA CGCTGCGCGG CTTCGGCTTC ATCGAGAGGG TCAAGACCGC GGTGGAGAAG GCGTGCTCTG ACACCGTCTC CTGCGCCGAC
GTGCTGGCTC TCATGGCCAG GGACGCAGTG TGGCCGAGCA AGGGCCCGTT CTGGGCGGTC CCGCTGGGGC GGCGGGACGG CAGGGTGTCC ATCTCCAACG AGACCGACCA GCTGCCGCCG
CCCACGGGCA ACTTCACGGA GCTGGCCCAG CTTTTCGGCG CCAAGGGCCT GGACACCAGG GACCTGGCGG TGCTGTCGGC CGGCCACACC ATCGGCACGT CGTCGCATTG CTTCTCCTTC
TCGGACCGCC TCTACAACTT CACGGGCCTG GACGACGCCC GCGACACCGA CCCGGAGCTG GACCGGGCGT ACATGGCGCG CCTCCGCGCC AAGTGCGCCA GCCTGGACGA CAACACCACG
CTGGTGGAGA TGGACCCCGG CAGCTTCCGG ACCTTCGACC TGGGCTACTA CGCCAACGTG GCCAAGCGCA GGGGCGTCTT CCACTCCGAC GCCCAGCTGC TCGCCGACCC TTCCACCCGC
GCCTACGTGC TCCGCCACGC CACGGGTGCC CACAGGGACG AGTTCTTCGC CGACTTCGCC GCGTCCATGG TCAAGATGGG CGCCGTCGGC GTGCTCACCG GCGGCCAGGG CGAGGTCAGG
AAGAAGTGCA ACGTCGTCAA CTAA
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Retrieve as FASTA
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