Sequence Properties
first value : protein second value (mature protein)
|
Length (aa): |
250 (298) |
PWM (Da): |
27606.04 (31226.6) |
|
PI (pH):
| 5.79 (6.66) |
Peptide Signal:
| cut: 29 range:29-326 |
|
Sequence 0
Send to BLAST
Send to Peroxiscan
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MGKCYPKVSE EYQKAVEKCK RKLRGLIAEK HCAPLILRLA WHSAGTYDVK TKTGGPFGTI KHPDELAHEA NNGLDIAVRL LEPIKQQFPI LSYADFYQLA GIVAVEVTGG PEIPFHPGRP
DKDEPPPEGR LPDATKGSDH LRDIFGHMGL SDKDIVALSG GHTLGRCHKE RSGFEGAWTN NPLIFDNSYF KELLSGEKEG LIQLPSDKAL LEDPVFRPLV EKYAADEDAF FADYAEAHLK
LSELGFADAE *
|
Retrieve as FASTA
|
|
Remarks |
Complete sequence from RNA seq. Frame shift for medicinalplantgenomics. |
CDS►
Send to BLAST
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGGGAAGT GCTATCCGAA AGTGAGTGAG GAGTATCAAA AGGCAGTTGA GAAATGCAAG AGGAAGCTCA GAGGACTCAT TGCTGAGAAG CATTGTGCTC CTTTGATTCT GCGATTGGCA
TGGCATTCAG CTGGGACTTA TGATGTGAAA ACCAAAACCG GAGGACCGTT TGGGACGATT AAGCACCCAG ATGAACTTGC TCATGAAGCT AACAATGGCC TTGATATTGC TGTCAGACTT
CTAGAGCCAA TCAAGCAGCA ATTTCCAATC CTTTCTTATG CTGATTTCTA TCAGTTGGCT GGAATTGTCG CTGTTGAAGT GACCGGAGGC CCAGAAATTC CTTTTCATCC TGGGAGACCG
GACAAGGATG AACCTCCTCC AGAAGGCCGC TTACCTGATG CCACTAAAGG TTCTGATCAC CTGAGGGACA TTTTTGGGCA CATGGGGCTG AGCGACAAAG ATATTGTTGC TCTTTCCGGT
GGTCACACAC TGGGACGGTG CCACAAGGAA CGGTCTGGAT TTGAGGGAGC TTGGACAAAC AATCCTCTCA TCTTTGATAA CTCTTATTTC AAAGAACTTC TAAGTGGAGA GAAAGAAGGT
CTTATTCAGC TTCCATCTGA CAAAGCACTT CTGGAAGACC CAGTTTTTCG CCCTCTGGTT GAGAAATATG CTGCGGATGA GGATGCCTTC TTTGCAGACT ATGCTGAAGC TCATTTGAAA
CTCTCTGAAC TCGGATTCGC GGATGCTGAG TAA
|
Retrieve as FASTA
|
|
cDNA►
Send to BLAST
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
CGGCCGGGGG ATCGCCCGCC TGCTAGAACT TTCTGGTCTT CCACTTAGCT TTTTATATGG AGTAGTGAGT GGGTTCGTTC TGAAGGCACA CGACAACCTT GACGTGATTC CACTATCTTC
CTCTCATCGA TTGAATTTTC TGCGATCTTC ACCGGCGGTT CCGCTCTACA GAATTGCACA GGCATGGGGA AGTGCTATCC GAAAGTGAGT GAGGAGTATC AAAAGGCAGT TGAGAAATGC
AAGAGGAAGC TCAGAGGACT CATTGCTGAG AAGCATTGTG CTCCTTTGAT TCTGCGATTG GCATGGCATT CAGCTGGGAC TTATGATGTG AAAACCAAAA CCGGAGGACC GTTTGGGACG
ATTAAGCACC CAGATGAACT TGCTCATGAA GCTAACAATG GCCTTGATAT TGCTGTCAGA CTTCTAGAGC CAATCAAGCA GCAATTTCCA ATCCTTTCTT ATGCTGATTT CTATCAGTTG
GCTGGAATTG TCGCTGTTGA AGTGACCGGA GGCCCAGAAA TTCCTTTTCA TCCTGGGAGA CCGGACAAGG ATGAACCTCC TCCAGAAGGC CGCTTACCTG ATGCCACTAA AGGTTCTGAT
CACCTGAGGG ACATTTTTGG GCACATGGGG CTGAGCGACA AAGATATTGT TGCTCTTTCC GGTGGTCACA CACTGGGACG GTGCCACAAG GAACGGTCTG GATTTGAGGG AGCTTGGACA
AACAATCCTC TCATCTTTGA TAACTCTTAT TTCAAAGAAC TTCTAAGTGG AGAGAAAGAA GGTCTTATTC AGCTTCCATC TGACAAAGCA CTTCTGGAAG ACCCAGTTTT TCGCCCTCTG
GTTGAGAAAT ATGCTGCGGA TGAGGATGCC TTCTTTGCAG ACTATGCTGA AGCTCATTTG AAACTCTCTG AACTCGGATT CGCGGATGCT GAGTAAGGTC CTACCACAAG AGACTGGCTT
TGGCGACATT TGGTGACCTC CTTATTTGCT TCATGTTGGC ACCTTTTAGT CCCTGGTATT TGTTGGTTTG TATATGTTGA AACTCTTGAG TACAAAGTAT ATCAATTGTC TCATTGCTTG
TGATTTGTGA TCTGTGTGCT ATTATGCCTA TGTAATGTAA TCTTCATGAA CTGCTAGAAT TGTTCCATAA AAGAGCAGAT GCATCTTTCT GGTTACAAAT AATAATACAA AAATATATTT
ATTCCAAGTT ACACCTTATG GTTATATTGA CCTTTC
|
Retrieve as FASTA
|
|