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Entry information : GrPrx03 ( Gorai.007G049900)
Entry ID 13422
Creation 2015-08-11 (Christophe Dunand)
Last sequence changes 2016-02-10 (Catherine Mathe)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-02-10 (Christophe Dunand)
Peroxidase information: GrPrx03 ( Gorai.007G049900)
Name (synonym) GrPrx03 ( Gorai.007G049900)
Class Class III peroxidase    [Orthogroup: Prx001]
Taxonomy Eukaryota Viridiplantae Streptophyta Malvaceae Gossypium
Organism Gossypium raimondii    [TaxId: 29730 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GrPrx03
start..stop		 S start..stop
GrPrx05 620 0 1..332 1..326
GrPrx04 598 0 1..331 1..333
CclPrx35 578 0 1..330 4..330
RcPrx17 577 0 6..331 7..331
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 3513604..3513828 223 N° 2 3513235..3513426 190 N° 3 3512994..3513159 164 N° 4 3512487..3512899 411
complement(join(3512487..3512899,3512994..3513159,3513235..3513426,3513604..3513 828))


exon

Literature and cross-references GrPrx03 ( Gorai.007G049900)
DNA ref. Phytozome 12:   Chr07 (3513968..3512343)
Cluster/Prediction ref. Phytozome Gene 12:   26779853
Protein sequence: GrPrx03 ( Gorai.007G049900)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   331 (310)
PWM (Da):   %s   36472.48 (34143.2)  
PI (pH):   %s   9.07 (9.22) Peptide Signal:   %s   cut: 22 range:22-331
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MVHYIIVITLLALGLAPHCLSSKTVGGGYLYPQFYDHSCPKAQEIVRNVVAKAVAGEPRMAASLLRLHFHDCFVKGCDASILLDSSGSIISEKRSNPNRNSARGFEVIDEIKAVMEKECP
HTVSCADIMALAARDSTVLTGGPSWEVPLGRRDARGASLSGSNNNIPAPNNTFQTILTKFKLQGLDIVDLVALSGSHTIGNSRCTSFRQRLYNQSGNGQPDNTLDQSYASQLRRNCPRSG
GDQNLFFLDFVSPIKFDNSYFKNLLANKGLLNSDQVLFTKNGESRELVKTYAYNQELFFQQFAKSMIKMGNISPLTGYRGEIRQNCRKINA*

Retrieve as FASTA  
Remarks Complete sequence from genomic (3 introns).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGTTCATTATATCATAGTTATTACTCTTCTAGCCCTTGGCCTTGCCCCCCATTGTTTGTCTTCCAAGACAGTTGGAGGAGGATACCTTTACCCTCAGTTTTACGATCATTCATGTCCC
AAAGCTCAAGAGATTGTGAGAAACGTTGTTGCCAAAGCTGTTGCAGGGGAACCTCGTATGGCTGCTTCATTGCTTAGGCTACACTTCCACGACTGCTTTGTTAAGGTAACTTCATCCTCG
CCAAACCAATGGCAAAGTGTTTACTACTCGACTGTCAGTGTCGAATACAAGACTAGTGTGTCTAATATGGATATATTCAATCTTTTCCAAGTTTTTCTTTGAAGGATTATATTATTATAT
ATGGTTATATAGCAGCAAAGTTTAACAATTCATTGTTTCCAGGGGGCTGTGATGCATCGATTTTGTTAGACAGCAGCGGGAGCATTATCAGCGAAAAGAGGTCGAATCCAAACAGGAACT
CAGCTAGAGGATTCGAAGTGATAGATGAGATCAAAGCTGTAATGGAGAAAGAGTGTCCTCATACAGTGTCATGTGCTGATATTATGGCTTTGGCTGCTAGAGATTCTACCGTTCTCGTAT
GTCGTTTTGGTTATAGTCTTGTCTTGTCATTGAAATTGACCCCGTGGTAACATGTTTTTTTGGATTTGCAGACACAGGTGGGCCTAGCTGGGAAGTCCCTCTTGGAAGAAGGGATGCCAG
AGGTGCAAGCTTGAGTGGCTCTAACAACAACATTCCTGCTCCAAACAACACATTCCAAACAATTCTCACCAAGTTTAAGCTACAAGGCCTAGACATTGTTGATCTTGTTGCACTTTCTGG
TAAGCTATATAGTTCTTTCACATTCTGCAAATAACCAAGAAAGGCAATACTCTGAAAATATATGACCAAGTTGTCCATATATATATCATGCAGGGGGAGCCACACAATAGGAAATTCCCG
ATGCACCAGTTTCAGGCAGAGACTATACAACCAATCAGGCAATGGACAACCAGACAACACACTTGACCAATCCTATGCTTCTCAGCTGCGCAGGAACTGTCCAAGATCAGGCGGCGACCA
GAACCTGTTTTTCTTAGATTTTGTTAGCCCCATAAAGTTCGACAACAGCTACTTCAAGAACTTATTGGCTAACAAGGGACTGTTGAACTCTGACCAAGTTTTGTTCACAAAGAATGGTGA
ATCAAGGGAGTTAGTGAAGACATATGCTTATAACCAGGAACTCTTCTTTCAGCAATTCGCTAAGTCCATGATTAAGATGGGGAATATTTCACCGTTGACAGGGTATAGGGGTGAGATCAG
ACAGAATTGCAGGAAAATTAACGCTTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGTTCATTATATCATAGTTATTACTCTTCTAGCCCTTGGCCTTGCCCCCCATTGTTTGTCTTCCAAGACAGTTGGAGGAGGATACCTTTACCCTCAGTTTTACGATCATTCATGTCCC
AAAGCTCAAGAGATTGTGAGAAACGTTGTTGCCAAAGCTGTTGCAGGGGAACCTCGTATGGCTGCTTCATTGCTTAGGCTACACTTCCACGACTGCTTTGTTAAGGGCTGTGATGCATCG
ATTTTGTTAGACAGCAGCGGGAGCATTATCAGCGAAAAGAGGTCGAATCCAAACAGGAACTCAGCTAGAGGATTCGAAGTGATAGATGAGATCAAAGCTGTAATGGAGAAAGAGTGTCCT
CATACAGTGTCATGTGCTGATATTATGGCTTTGGCTGCTAGAGATTCTACCGTTCTCACAGGTGGGCCTAGCTGGGAAGTCCCTCTTGGAAGAAGGGATGCCAGAGGTGCAAGCTTGAGT
GGCTCTAACAACAACATTCCTGCTCCAAACAACACATTCCAAACAATTCTCACCAAGTTTAAGCTACAAGGCCTAGACATTGTTGATCTTGTTGCACTTTCTGGGAGCCACACAATAGGA
AATTCCCGATGCACCAGTTTCAGGCAGAGACTATACAACCAATCAGGCAATGGACAACCAGACAACACACTTGACCAATCCTATGCTTCTCAGCTGCGCAGGAACTGTCCAAGATCAGGC
GGCGACCAGAACCTGTTTTTCTTAGATTTTGTTAGCCCCATAAAGTTCGACAACAGCTACTTCAAGAACTTATTGGCTAACAAGGGACTGTTGAACTCTGACCAAGTTTTGTTCACAAAG
AATGGTGAATCAAGGGAGTTAGTGAAGACATATGCTTATAACCAGGAACTCTTCTTTCAGCAATTCGCTAAGTCCATGATTAAGATGGGGAATATTTCACCGTTGACAGGGTATAGGGGT
GAGATCAGACAGAATTGCAGGAAAATTAACGCTTAA

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATTTCAATCA AAGTCTCCCT TATAAATACC CATTCCCCTC TTTGAAAGCT CTCATCATAA CAACGTGTTC TCTTCATATT TCAGCTGTTT CCACTTCAAC TATACATCTT TTTGTCTAGA  AAGTAAAAAA GGTAAACACT ATGGTTCATT ATATCATAGT TATTACTCTT CTAGCCCTTG GCCTTGCCCC CCATTGTTTG TCTTCCAAGA CAGTTGGAGG AGGATACCTT TACCCTCAGT  TTTACGATCA TTCATGTCCC AAAGCTCAAG AGATTGTGAG AAACGTTGTT GCCAAAGCTG TTGCAGGGGA ACCTCGTATG GCTGCTTCAT TGCTTAGGCT ACACTTCCAC GACTGCTTTG  TTAAGGGCTG TGATGCATCG ATTTTGTTAG ACAGCAGCGG GAGCATTATC AGCGAAAAGA GGTCGAATCC AAACAGGAAC TCAGCTAGAG GATTCGAAGT GATAGATGAG ATCAAAGCTG  TAATGGAGAA AGAGTGTCCT CATACAGTGT CATGTGCTGA TATTATGGCT TTGGCTGCTA GAGATTCTAC CGTTCTCACA GGTGGGCCTA GCTGGGAAGT CCCTCTTGGA AGAAGGGATG  CCAGAGGTGC AAGCTTGAGT GGCTCTAACA ACAACATTCC TGCTCCAAAC AACACATTCC AAACAATTCT CACCAAGTTT AAGCTACAAG GCCTAGACAT TGTTGATCTT GTTGCACTTT  CTGGGAGCCA CACAATAGGA AATTCCCGAT GCACCAGTTT CAGGCAGAGA CTATACAACC AATCAGGCAA TGGACAACCA GACAACACAC TTGACCAATC CTATGCTTCT CAGCTGCGCA  GGAACTGTCC AAGATCAGGC GGCGACCAGA ACCTGTTTTT CTTAGATTTT GTTAGCCCCA TAAAGTTCGA CAACAGCTAC TTCAAGAACT TATTGGCTAA CAAGGGACTG TTGAACTCTG  ACCAAGTTTT GTTCACAAAG AATGGTGAAT CAAGGGAGTT AGTGAAGACA TATGCTTATA ACCAGGAACT CTTCTTTCAG CAATTCGCTA AGTCCATGAT TAAGATGGGG AATATTTCAC  CGTTGACAGG GTATAGGGGT GAGATCAGAC AGAATTGCAG GAAAATTAAC GCTTAAAATC ATCAAGTGAT AATTATATGA ATAAAGTTTG TATTCCTGTT TGTCATGTTA TTTTGGTTTC 
CTTGTATTGA ATTAATTAAT AAAAGAATTT CATTTGTGTG TATTGCTGGG CCAACGATTG TCCTTTTCTT TGTTCCCTGG 

Retrieve as FASTA