Entry information : HaPrx30 (HanXRQChr16g0501451)
Entry ID 13550
Creation 2016-04-25 (Christophe Dunand)
Last sequence changes 2016-04-25 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaPrx30 (HanXRQChr16g0501451)
Name (synonym) HaPrx30 (HanXRQChr16g0501451)
Class Class III peroxidase    [Orthogroup: Prx036]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaPrx30
start..stop
S start..stop
HaPrx68 594 0 26..387 1..351
LsaPrx30 524 0 79..387 49..357
HaPrx02 516 0 26..387 1..356
VvPrx89 513 0 29..387 6..352
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 13996947..13997339 393 N° 2 13997444..13997635 192 N° 3 13997735..13997900 166 N° 4 13998218..13998630 413
join(13996947..13997339,13997444..13997635,13997735..13997900,13998218..13998630 )


exon

Literature and cross-references HaPrx30 (HanXRQChr16g0501451)
DNA ref. HanXRQ genome:   HanXRQChr16 (13996947..13998630)
Protein sequence: HaPrx30 (HanXRQChr16g0501451)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   387
PWM (Da):   %s   41618.2 Transmb domain:   %s   i27-49o
PI (pH):   %s   4.39
Sequence 428
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MLTLYKDQFLACSIPCNLFSQVGSSMASLLYTTLMLIALISSPAICLAFPGFSFGWGVGSGSGGGEGSFGSSGDEPFGGGQGYPGLFPEFYSLSCPQANDIVMSVLESAIAKDPRMAASLLRLHFHDCFVQGCDASVLLDDSAMFASEKNSGPNSNSIRGFEVIDEIKSKLEEACPETVSCADILALAARGSTVLSGGPNWELPLGRRDAMQASLNGANNNLPPPNSTIQNLITLFRRQGLDEVDLVSLSGAHSIGMARCTSFKQRLYNQDGNNQPDSTLEMTYYNDLKTVCPQTGGDDNISPLDFESPARFDNTYFKLIMRGKGLLTSDQVLLTGNVEETMFLVKAFTEDDALFFDQFARSMVKMGNINPLIGYNGEVRKNCRMAN

Retrieve as FASTA  
Remarks Complete sequence from genomic (3 introns).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TGCTAACTCTTTATAAAGACCAGTTTCTTGCATGCTCCATACCATGCAATCTTTTCTCACAAGTTGGTTCATCAATGGCCTCTCTTCTCTACACTACCTTAATGCTAATAGCTTTGATCT
CTTCCCCCGCGATATGCCTTGCTTTTCCGGGGTTCAGCTTTGGATGGGGTGTTGGCAGTGGTAGTGGCGGTGGAGAAGGGTCTTTTGGTAGCAGTGGAGATGAGCCTTTTGGCGGCGGCC
AAGGGTATCCTGGTCTTTTCCCAGAATTTTACAGTTTGTCATGTCCTCAAGCTAATGACATTGTCATGTCAGTTCTTGAGAGTGCCATTGCTAAAGATCCAAGGATGGCTGCTTCTTTAC
TAAGGCTTCATTTTCATGATTGCTTTGTTCAG
GTAATTAGTGACTACATTAGTTTATTCATGACACATTATGTTACACATTGATTTATATGGAATTTGGATTAATTTGTGAAACTGATAG
GTTTGTTTCATCTCAGGGATGTGACGCATCTGTCTTGTTGGATGATAGTGCAATGTTTGCAAGCGAAAAGAACTCCGGGCCTAATAGTAATTCGATCAGAGGATTTGAAGTGATCGATGA
GATCAAGTCTAAATTAGAGGAAGCATGTCCTGAGACGGTTTCTTGTGCTGACATTCTTGCCCTTGCGGCTCGAGGTTCCACTGTTCTA
GTAAGCAAAATAACTTCATGTCGTTCTATAAG
TCTAGGTGTTCGATAAACACAAATGATCTGATTAACAAATAAATATTTGCCTGTGATAACATTGTAGAGTGGTGGACCGAACTGGGAATTGCCATTAGGAAGGAGAGATGCAATGCAAGC
AAGTCTAAACGGCGCGAACAACAATCTTCCTCCACCAAACTCCACCATTCAAAACCTTATCACACTTTTCCGGCGACAAGGCCTTGATGAAGTTGACTTGGTCTCTCTTTCTG
GTTAGTT
ATAAATCTCATGTCACAACAAAAATATATATATGAAATGAGGAAGGTTAACGTACATTACGGGTTAACGTACGTCACGTACGACAGGTAATTACGCCCATTCATTTTAAAATCACGCACG
TTATAACTCAAAAATCCAAAATCACGCATGTTGAAACACAATAATCACGCATATTGAAAACATTTATCACGCACGTTGTCGTACGTGAAGTACGTTAAGCTGTAATGTACGATATACTTT
TTCTATATGAAATATTCCCTGATAATTATACAAAGGCATAATAATAGTAATATATTATGCTTTCTTGTAGGAGCTCATAGCATAGGAATGGCTAGATGCACTTCATTTAAGCAAAGGCTA
TACAATCAAGATGGAAACAATCAACCGGATTCAACTCTGGAGATGACCTACTACAATGACTTAAAAACAGTTTGCCCACAAACCGGCGGCGATGACAACATTTCTCCTCTAGATTTTGAA
TCTCCTGCAAGATTTGATAACACATATTTCAAGCTCATAATGCGGGGAAAAGGACTTTTAACTTCTGATCAAGTTCTTTTGACAGGGAATGTTGAAGAAACTATGTTTCTGGTTAAGGCA
TTCACAGAGGATGATGCTCTCTTCTTTGACCAGTTTGCTAGGTCAATGGTTAAAATGGGAAATATCAATCCCCTCATTGGTTATAACGGCGAAGTGAGGAAGAACTGTCGAATGGCTAAC
TAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TGCTAACTCTTTATAAAGACCAGTTTCTTGCATGCTCCATACCATGCAATCTTTTCTCACAAGTTGGTTCATCAATGGCCTCTCTTCTCTACACTACCTTAATGCTAATAGCTTTGATCT
CTTCCCCCGCGATATGCCTTGCTTTTCCGGGGTTCAGCTTTGGATGGGGTGTTGGCAGTGGTAGTGGCGGTGGAGAAGGGTCTTTTGGTAGCAGTGGAGATGAGCCTTTTGGCGGCGGCC
AAGGGTATCCTGGTCTTTTCCCAGAATTTTACAGTTTGTCATGTCCTCAAGCTAATGACATTGTCATGTCAGTTCTTGAGAGTGCCATTGCTAAAGATCCAAGGATGGCTGCTTCTTTAC
TAAGGCTTCATTTTCATGATTGCTTTGTTCAG
GGATGTGACGCATCTGTCTTGTTGGATGATAGTGCAATGTTTGCAAGCGAAAAGAACTCCGGGCCTAATAGTAATTCGATCAGAGGAT
TTGAAGTGATCGATGAGATCAAGTCTAAATTAGAGGAAGCATGTCCTGAGACGGTTTCTTGTGCTGACATTCTTGCCCTTGCGGCTCGAGGTTCCACTGTTCTA
AGTGGTGGACCGAACT
GGGAATTGCCATTAGGAAGGAGAGATGCAATGCAAGCAAGTCTAAACGGCGCGAACAACAATCTTCCTCCACCAAACTCCACCATTCAAAACCTTATCACACTTTTCCGGCGACAAGGCC
TTGATGAAGTTGACTTGGTCTCTCTTTCTG
GAGCTCATAGCATAGGAATGGCTAGATGCACTTCATTTAAGCAAAGGCTATACAATCAAGATGGAAACAATCAACCGGATTCAACTCTGG
AGATGACCTACTACAATGACTTAAAAACAGTTTGCCCACAAACCGGCGGCGATGACAACATTTCTCCTCTAGATTTTGAATCTCCTGCAAGATTTGATAACACATATTTCAAGCTCATAA
TGCGGGGAAAAGGACTTTTAACTTCTGATCAAGTTCTTTTGACAGGGAATGTTGAAGAAACTATGTTTCTGGTTAAGGCATTCACAGAGGATGATGCTCTCTTCTTTGACCAGTTTGCTA
GGTCAATGGTTAAAATGGGAAATATCAATCCCCTCATTGGTTATAACGGCGAAGTGAGGAAGAACTGTCGAATGGCTAACTAA

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCTAACTC TTTATAAAGA CCAGTTTCTT GCATGCTCCA TACCATGCAA TCTTTTCTCA CAAGTTGGTT CATCAATGGC CTCTCTTCTC TACACTACCT TAATGCTAAT AGCTTTGATC  TCTTCCCCCG CGATATGCCT TGCTTTTCCG GGGTTCAGCT TTGGATGGGG TGTTGGCAGT GGTAGTGGCG GTGGAGAAGG GTCTTTTGGT AGCAGTGGAG ATGAGCCTTT TGGCGGCGGC  CAAGGGTATC CTGGTCTTTT CCCAGAATTT TACAGTTTGT CATGTCCTCA AGCTAATGAC ATTGTCATGT CAGTTCTTGA GAGTGCCATT GCTAAAGATC CAAGGATGGC TGCTTCTTTA  CTAAGGCTTC ATTTTCATGA TTGCTTTGTT CAGGGATGTG ACGCATCTGT CTTGTTGGAT GATAGTGCAA TGTTTGCAAG CGAAAAGAAC TCCGGGCCTA ATAGTAATTC GATCAGAGGA  TTTGAAGTGA TCGATGAGAT CAAGTCTAAA TTAGAGGAAG CATGTCCTGA GACGGTTTCT TGTGCTGACA TTCTTGCCCT TGCGGCTCGA GGTTCCACTG TTCTAAGTGG TGGACCGAAC  TGGGAATTGC CATTAGGAAG GAGAGATGCA ATGCAAGCAA GTCTAAACGG CGCGAACAAC AATCTTCCTC CACCAAACTC CACCATTCAA AACCTTATCA CACTTTTCCG GCGACAAGGC  CTTGATGAAG TTGACTTGGT CTCTCTTTCT GGAGCTCATA GCATAGGAAT GGCTAGATGC ACTTCATTTA AGCAAAGGCT ATACAATCAA GATGGAAACA ATCAACCGGA TTCAACTCTG  GAGATGACCT ACTACAATGA CTTAAAAACA GTTTGCCCAC AAACCGGCGG CGATGACAAC ATTTCTCCTC TAGATTTTGA ATCTCCTGCA AGATTTGATA ACACATATTT CAAGCTCATA  ATGCGGGGAA AAGGACTTTT AACTTCTGAT CAAGTTCTTT TGACAGGGAA TGTTGAAGAA ACTATGTTTC TGGTTAAGGC ATTCACAGAG GATGATGCTC TCTTCTTTGA CCAGTTTGCT 
AGGTCAATGG TTAAAATGGG AAATATCAAT CCCCTCATTG GTTATAACGG CGAAGTGAGG AAGAACTGTC GAATGGCTAA CTAA 

Retrieve as FASTA