View Redoxidase 13652

Entry information : HaPrx98 (HanXRQChr12g0378371)

Entry ID	13652
Creation	2016-05-02 (Christophe Dunand)
Last sequence changes	2016-05-02 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2017-11-23 (Catherine Mathe (Scipio))

Peroxidase information: HaPrx98 (HanXRQChr12g0378371)

Name (synonym)

HaPrx98 (HanXRQChr12g0378371)

Class

Class III peroxidase [Orthogroup: Prx024]

Taxonomy

Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus

Organism

Helianthus annuus (Sunflower) [TaxId: 4232 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	HaPrx98 start..stop	S start..stop
NtPrx31-1A	463	1.25e-165	2..323	6..327
LvPrx18	462	1.4e-165	5..300	10..304
NtPrx31-1B	461	9.76e-165	2..323	6..327
LsaPrx18	459	1.57e-164	5..300	10..304

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '13652' 'join(112836176..112836379,112836619..112836810,112836891..112837056,112837182..112837591)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	112836176..112836379	202	N° 2	112836619..112836810	190	N° 3	112836891..112837056	164	N° 4	112837182..112837591	408
join(112836176..112836379,112836619..112836810,112836891..112837056,112837182..1 12837591)

Literature and cross-references HaPrx98 (HanXRQChr12g0378371)

DNA ref.	HanXRQ genome: HanXRQChr12 (112836176..112837591)

Protein sequence: HaPrx98 (HanXRQChr12g0378371)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	323 (302)
PWM (Da):	35377.59 (32904.4)
PI (pH):	6.12 (5.76)	Peptide Signal:	cut: 22 range:22-323

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MHFPTISLVFCLFVFQPFVYGQLDYKFYDTTCPNLTKIVRFGVWS
AMANDTRMAASLLRLHFHDCISNGCDASVLLDETSSFRSEKDALPNLNSARGFELIESIKANVEKVCPKTVSCVDILTLAVRDAVLLTGGRYWNVALGRRDGLTANITAANTMTPSPFESLDDIIAKFTAKGLDIKDVVALSG
AHTIGFVQCFAFKFRLFNFSGTGSFDPSLDASFASSLQTQCPNQDASDTTLVPLDAVTTTKFDNMFFRNLVNNSGVLGSDQALMSDNRTSAMVINYSKYPFWFAKDFSDSMVKLSNVGVI
TGQNGQVRDKCNLVN

Retrieve as FASTA

Remarks

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGCATTTTCCTACTATTAGTCTCGTCTTTTGCCTTTTCGTTTTTCAACCGTTTGTATATGGTCAACTTGATTACAAATTTTATGATACCACTTGTCCTAATTTGACGAAAATCGTGAGG
TTCGGTGTTTGGTCTGCGATGGCTAACGATACCAGAATGGCGGCATCACTTCTTCGCTTGCATTTTCATGACTGTATTTCTAATATGTAATAATTTCGTCATTTTCATTTCTTGTATTTT
GAAATTTTTAATCGAATATTTTTATGTGAATCATGGGGACCCCACCAATACCCTGCTAACCAATAAGATTAAGAAAAAACGCAGCTTGCGTTGGGTAGGTAGCCTTCAACGGGGTTAAAT
GCATAAATCACTGCCAGCCGCTTAAATGTTAAATCTTTTAAATGTCGGACTAAATTAAATTAACTTTTTTTTCGTGTGTGTCTAGGGGTGTGATGCTTCGGTGTTACTTGATGAGACTAG
TAGTTTCAGGAGCGAGAAGGACGCTCTTCCTAATCTAAATTCAGCTAGAGGGTTTGAGCTTATTGAAAGCATAAAAGCAAATGTGGAGAAAGTTTGTCCTAAAACAGTTTCGTGTGTTGA
CATATTGACACTCGCTGTGAGAGACGCAGTTTTACTGTGGTAAGACCTTTGTTATATAAACAACATTACAAAAAAAAAATTGGTATTTTTCTAACATATAAATATGCTTTGTTTTCTAGA
CGGGAGGGCGTTATTGGAATGTAGCCCTGGGACGTCGAGATGGTCTCACAGCAAATATAACTGCGGCAAACACGATGACTCCATCACCTTTTGAGTCTTTAGATGACATTATTGCAAAAT
TCACAGCAAAAGGTCTTGATATAAAAGACGTAGTTGCATTATCAGAGGTAAAAAAACATAACATTACCACAAGTTAGCTAATTAATTATACAAATTTTTGTTTGTTGTCATTTTCACACA
CATGTAAGGTGTAGTAGGATTGTGATGTTATGTTGCTTTAATTTGTGTGAAGGTGCGCATACCATAGGATTTGTACAATGCTTCGCGTTCAAGTTCAGACTATTCAACTTTAGTGGAACA
GGGAGTTTTGATCCATCACTAGACGCATCATTTGCAAGTAGTTTGCAAACTCAGTGTCCGAATCAAGATGCTTCGGACACCACACTAGTCCCTCTTGACGCGGTGACAACTACAAAGTTT
GACAACATGTTTTTCAGGAATCTTGTGAACAACTCGGGGGTTTTAGGTTCAGATCAAGCTCTTATGAGTGATAATAGGACCTCGGCCATGGTTATAAACTATAGCAAGTATCCGTTCTGG
TTTGCTAAAGATTTTAGTGATTCGATGGTTAAGCTAAGCAACGTGGGTGTAATTACGGGGCAAAATGGTCAAGTTAGAGACAAATGCAACCTTGTGAACTAG

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA

cDNA►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

TCTATTATCT TAACGACAAA GTTCACTGAA TTAGGAGGCT TCCTTACATA CACCAATATT ACATATAAAA TACACAATTG TTTAGAGTGT AATCCTAGTG TCTTGAACTA TCAACTGCTT TTTGCATACT GAATGAGCAC CAACTCCACT TAGGAGCTTC AGCTCAGCAT CCAAACTCAA AAGTGCCTTC ATTTTATCTT GATGTTGACT TGTTCCAAAC TCTTTCTAGT GGCAGACCCA CTGTATATAT AACAAAAATA TCTATTTAAG CCCATCTTGT GTTGCCATAA GTTCTAAGAG TAAGAGCTCT TGAAGCAGCA CATAACTACA AACATGCATT TTCCTACTAT TAGTCTCGTC TTTTGCCTTT TCGTTTTTCA ACCGTTTGTA TATGGTCAAC TTGATTACAA ATTTTATGAT ACCACTTGTC CTAATTTGAC GAAAATCGTG AGGTTCGGTG TTTGGTCTGC GATGGCTAAC GATACCAGAA TGGCGGCATC ACTTCTTCGC TTGCATTTTC ATGACTGTAT TTCTAATGGG TGTGATGCTT CGGTGTTACT TGATGAGACT AGTAGTTTCA GGAGCGAGAA GGACGCTCTT CCTAATCTAA ATTCAGCTAG AGGGTTTGAG CTTATTGAAA GCATAAAAGC AAATGTGGAG AAAGTTTGTC CTAAAACAGT TTCGTGTGTT GACATATTGA CACTCGCTGT GAGAGACGCA GTTTTACTGA CGGGAGGGCG TTATTGGAAT GTAGCCCTGG GACGTCGAGA TGGTCTCACA GCAAATATAA CTGCGGCAAA CACGATGACT CCATCACCTT TTGAGTCTTT AGATGACATT ATTGCAAAAT TCACAGCAAA AGGTCTTGAT ATAAAAGACG TAGTTGCATT ATCAGGTGCG CATACCATAG GATTTGTACA ATGCTTCGCG TTCAAGTTCA GACTATTCAA CTTTAGTGGA ACAGGGAGTT TTGATCCATC ACTAGACGCA TCATTTGCAA GTAGTTTGCA AACTCAGTGT CCGAATCAAG ATGCTTCGGA CACCACACTA GTCCCTCTTG ACGCGGTGAC AACTACAAAG TTTGACAACA TGTTTTTCAG GAATCTTGTG AACAACTCGG GGGTTTTAGG TTCAGATCAA GCTCTTATGA GTGATAATAG GACCTCGGCC ATGGTTATAA ACTATAGCAA GTATCCGTTC TGGTTTGCTA AAGATTTTAG TGATTCGATG GTTAAGCTAA GCAACGTGGG TGTAATTACG GGGCAAAATG GTCAAGTTAG AGACAAATGC AACCTTGTGA ACTAGAAAAT CTGTAGCTTT TCATGGTTGT TGTAGATTGT GTTTCAGACT TGTTTATGTT TTTGGATGAA TAATTATGCT TATTGCAAAT ATTGAATTCT GCTATATGCG ACAATTTCAA CTCATTTACT TTATAAATTG
ATCGTTTTTA GCTGTAAATA TAAATAAATA CATGTTAACT GTTAAGAAAA CTTAAAA

Retrieve as FASTA