View Redoxidase 13685

Entry information : HaAOX04(HanXRQr2_Chr13g0598161 / HanXRQChr13g0411131)

Entry ID	13685
Creation	2016-05-12 (Christophe Dunand)
Last sequence changes	2016-05-12 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2021-11-25 (Christophe Dunand)

Peroxidase information: HaAOX04(HanXRQr2_Chr13g0598161 / HanXRQChr13g0411131)

Name

HaAOX04(HanXRQr2_Chr13g0598161 / HanXRQChr13g0411131)

Class

Alternative Oxidase [Orthogroup: AOX004]*

Taxonomy

Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus

Organism

Helianthus annuus (Sunflower) [TaxId: 4232 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	HaAOX04 start..stop	S start..stop
HdebAOX04	724	0	1..370	1..370
HargAOX04	716	0	1..370	1..370
HnegAOX04	678	0	40..370	1..331
LeAOX04	435	6.89e-154	40..370	1..318

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '13685' 'complement(join(138314784..138314840,138314945..138315433,138315915..138316043,138316123..138316557))'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	138316123..138316557	433	N° 2	138315915..138316043	127	N° 3	138314945..138315433	487	N° 4	138314784..138314840	55
complement(join(138314784..138314840,138314945..138315433,138315915..138316043,1 38316123..138316557))

Literature and cross-references HaAOX04(HanXRQr2_Chr13g0598161 / HanXRQChr13g0411131)

DNA ref.	HanXRQ genome: HanXRQChr13 (138316557..138314784)

Protein sequence: HaAOX04(HanXRQr2_Chr13g0598161 / HanXRQChr13g0411131)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	370 (304)
PWM (Da):	42136.15 (32223.8)
PI (pH):	8.15 (4.73)	Peptide Signal:	cut: 28 range:28-331

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MNHVNILKAIYKSSNHHAYFSPTNYQISHNTFNQSLDLEMNRKGT
IVATKASQLLLTQLRTRLFSTTSFTGSVITEPFNVPMSSTMGTTRLLTMPARNYSTHVSSGSSKDKKEDNDTKAV
SSYWGVAPPTLTKSDGSAWKWNCFRPWEAYQADTTIDVKKHHNPVTWNDKIAFWIVQALKYPTYLYFQKKHIHHAVLLETVAAVPGMVGGMLLHTKSLRRFEQSGGWIKALLEEAENERM
HLMTFMDVYEPKWHERALVFAVQGVFFNAYFLAYLASPKLAHRITGYLEEEAVNSYTEFLNDLERGVMEDVPAPAIAIDYWCLPKNSTLKDVVRVIRADEAHHRDLNHYASDIHCQGHEL
KEYPAPIGYH

Retrieve as FASTA

Remarks

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGAATCATGTCAACATCCTCAAAGCAATATATAAAAGCTCAAACCATCATGCATATTTTTCACCAACAAATTACCAAATATCACATAACACCTTCAATCAATCTCTAGATCTTGAAATG
AACCGTAAAGGTACTATTGTAGCAACAAAGGCGTCCCAGTTGCTATTAACGCAACTACGGACACGTTTGTTTTCCACTACAAGTTTTACAGGTTCAGTCATTACTGAACCTTTTAACGTT
CCCATGAGTTCAACCATGGGGACCACTAGGCTTTTGACCATGCCTGCTCGAAACTACAGCACGCATGTGTCTTCAGGCTCCAGCAAAGACAAGAAAGAAGATAACGATACAAAAGCGGTT
TCAAGCTATTGGGGCGTGGCTCCTCCCACGCTCACCAAGTCTGACGGGTCTGCTTGGAAATGGAACTGTTTTCGGGTATGCGATCGCCCTCAACTCAGACATAGGTTTTATCGGAATAAT
GAAACTAACGATATTTGTTTTATAAAATTAATAGCCCCATGGGAAGCTTATCAAGCAGATACAACAATTGATGTTAAGAAGCACCACAATCCAGTCACTTGGAATGATAAAATTGCGTTT
TGGATCGTTCAAGCACTCAAGTATCCCACCTATTTATATTTTCAGGTACATACGTTGCTATTTCTGTCGCTAATTCATGCTCGTTGCAATAGTTTTACAGCGACCAAAACCATCGCAATT
ATGTATTTGCAATGGTTTTGGCGGTCACAGACGGTCCATTTTGTATACGCTTCACTAGGGATGAGGAAATGGTACCGGGAACCGGTACCAGTACTGAATTTTTCAAACCGAGTTGATTTT
CGGTACCGACATTTAGCGTTTTCGGAACCGGTTCGGTACTAGTATTTACCGAATTTTATCCTCAAATACCGGTCTGTATCGGTACCGAACTGTACTGTACCGGGTATTTTCAGTACGGTA
CCGTTATTTTTGGATTTTCGGTACCGAGCTCATCCCTATGTGTGTTACGACCATTTTGATTTTGGTCTCAAATCAGTCGCTAATTTTGCGAAGATTTTTGTTGCTCATAATTTTAGTCGC
TTTTGCCCATATTTTCGTAGTGATAGTGACACCATTTACAATACAGAAAAAAAACACATACACCACGCGGTTCTACTAGAAACAGTCGCTGCGGTACCCGGAATGGTCGGAGGGATGTTG
CTGCACACGAAATCACTTCGTCGATTCGAGCAAAGCGGTGGGTGGATCAAAGCCCTACTAGAAGAAGCCGAAAATGAGCGAATGCATCTCATGACCTTCATGGATGTATACGAACCAAAA
TGGCATGAACGCGCCTTGGTCTTTGCAGTCCAAGGCGTGTTCTTCAACGCGTATTTCCTAGCCTATTTGGCATCACCAAAGCTCGCTCACCGGATCACCGGCTACCTCGAGGAGGAGGCC
GTGAACTCGTATACCGAGTTCCTAAACGACCTCGAAAGGGGGGTGATGGAAGATGTTCCAGCACCCGCCATCGCCATTGATTATTGGTGCTTACCGAAGAACTCGACACTGAAAGATGTT
GTTAGGGTTATACGTGCGGACGAAGCACATCACCGCGATCTTAACCATTATGCTTCGGTAAGAATTTCGCTAATTTGCGTTATTTGGTCGCTAAATCTAATTAAGTCGTTGCTAATGATG
TGGGCTGTGATTAATGAATATTGTTATTTGTTTGGTTTCAGGAGACATTCATTGTCAAGGACATGAGCTAAAGGAGTACCCTGCTCCTATTGGATATCAC

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA

cDNA►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGAATCATG TCAACATCCT CAAAGCAATA TATAAAAGCT CAAACCATCA TGCATATTTT TCACCAACAA ATTACCAAAT ATCACATAAC ACCTTCAATC AATCTCTAGA TCTTGAAATG AACCGTAAAG GTACTATTGT AGCAACAAAG GCGTCCCAGT TGCTATTAAC GCAACTACGG ACACGTTTGT TTTCCACTAC AAGTTTTACA GGTTCAGTCA TTACTGAACC TTTTAACGTT CCCATGAGTT CAACCATGGG GACCACTAGG CTTTTGACCA TGCCTGCTCG AAACTACAGC ACGCATGTGT CTTCAGGCTC CAGCAAAGAC AAGAAAGAAG ATAACGATAC AAAAGCGGTT TCAAGCTATT GGGGCGTGGC TCCTCCCACG CTCACCAAGT CTGACGGGTC TGCTTGGAAA TGGAACTGTT TTCGGCCATG GGAAGCTTAT CAAGCAGATA CAACAATTGA TGTTAAGAAG CACCACAATC CAGTCACTTG GAATGATAAA ATTGCGTTTT GGATCGTTCA AGCACTCAAG TATCCCACCT ATTTATATTT TCAGAAAAAA CACATACACC ACGCGGTTCT ACTAGAAACA GTCGCTGCGG TACCCGGAAT GGTCGGAGGG ATGTTGCTGC ACACGAAATC ACTTCGTCGA TTCGAGCAAA GCGGTGGGTG GATCAAAGCC CTACTAGAAG AAGCCGAAAA TGAGCGAATG CATCTCATGA CCTTCATGGA TGTATACGAA CCAAAATGGC ATGAACGCGC CTTGGTCTTT GCAGTCCAAG GCGTGTTCTT CAACGCGTAT TTCCTAGCCT ATTTGGCATC ACCAAAGCTC GCTCACCGGA TCACCGGCTA CCTCGAGGAG GAGGCCGTGA ACTCGTATAC CGAGTTCCTA AACGACCTCG AAAGGGGGGT GATGGAAGAT GTTCCAGCAC CCGCCATCGC CATTGATTAT TGGTGCTTAC CGAAGAACTC GACACTGAAA GATGTTGTTA GGGTTATACG TGCGGACGAA GCACATCACC GCGATCTTAA CCATTATGCT TCGGACATTC ATTGTCAAGG ACATGAGCTA AAGGAGTACC CTGCTCCTAT TGGATATCAC TAAATTAAAA TATTGCGCTT GGTTGCTACA TAGTTATTCG ATGATTTGAA TTATGTGGAA TATGATTTCT ATATAGTTGT TCATATGATT
GTATTATAGA AGTCGCATGA TTTTTTTTTA ATATTATTGT AAACATGTAC GTGTAATGCA TTTATTTATT TATACAATGA TCCTTAAGGG TAAGTTAC

Retrieve as FASTA