Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
219 |
PWM (Da): |
24265.28 |
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PI (pH):
| 5.95 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MPGLTIGDSV PNLQVQTNQG NFKLHDFIGD NWTIIFSHPG DFTPVCTTEL GKMAAYVPEF DKREVKLLGL SCDDVKSHNE WIKDIEAYTP GCKVSYPIIA DPNREIIKQL NMVDPDEKDS
SGKQLPSRAL HIVGPDHQVK LSFLYPASTG RNMDEVVRAL DSLQKALKHK VATPANWKQG DPVVISPSVS SDQAKETFPQ GFETVDLPSK KEYLRFTNV
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Retrieve as FASTA
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Remarks |
Complete sequence from 38 ESTs and DNA. Incorrect prediction from Phytozome (partial and misplicing) . |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGCCTGGCC TCACAATTGG AGATTCTGTT CCCAACCTTC AAGTCCAAAC CAATCAAGGA AACTTTAAGC TTCATGACTT CATCGGTGAT AACTGGACCA TTATCTTCTC TCACCCAGGT
TCCCACTTTT GTCTCTGATC ATCTTACTAC TACTTTTTTT TTATTTGATA TATGATGATC ACTAATGTTC TTATGATGTG CTTGCATGTA GGTGATTTCA CTCCTGTGTG CACAACTGAA
CTTGGCAAGA TGGCTGCTTA TGTTCCAGAG TTTGATAAGA GAGAAGTGAA GCTTCTGGGT TTGTCCTGTG ATGACGTTAA GTCACACAAT GAGTGGATCA AAGACATTGA AGCCTACACC
GTGAGCTTTT CTTTGTGATT CTTGTTTGGT CAGACGTGTG GTCAATTGGT CAAATGTTGA CTTTTATTTT TGTGATTAAA CCACGTGTTG GTTTGCGTGC AGCCTGGTTG CAAGGTCTCA
TAGCCGATCA TCGCAGATCC CAATCGAGAG ATCATCAAGC AACTCAACAT GGTGGACCCG GATGAAAAAG ATTCATCAGG AAAGCAGCTC CCTTCTCGAG CCCTTCATAT CGTGGGCCCT
GATCATCAGG TGAAACTGAG CTTTCTTTAC CCGGCGTCGA CTGGCCGGAA CATGGATGAA GTAGTAAGGG CATTGGACTC TCTGCAGAAG GCACTGAAGC ATAAGGTTGC AACGCCTGCA
AACTGGAAGC AGGGAGATCC GGTGGTGATA TCACCAAGTG TGTCTAGTGA TCAAGCCAAA GAGACGTTCC CTCAAGGTTT TGAGACTGTG GATCTTCCAT CCAAGAAAGA GTACTTGCGT
TTCACCAATG TCTAA
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGCCTGGCC TCACAATTGG AGATTCTGTT CCCAACCTTC AAGTCCAAAC CAATCAAGGA AACTTTAAGC TTCATGACTT CATCGGTGAT AACTGGACCA TTATCTTCTC TCACCCAGGT
GATTTCACTC CTGTGTGCAC AACTGAACTT GGCAAGATGG CTGCTTATGT TCCAGAGTTT GATAAGAGAG AAGTGAAGCT TCTGGGTTTG TCCTGTGATG ACGTTAAGTC ACACAATGAG
TGGATCAAAG ACATTGAAGC CTACACACCT GGTTGCAAGG TCTCATATCC AATCATCGCA GATCCCAATC GAGAGATCAT CAAGCAACTC AACATGGTGG ACCCGGATGA AAAAGATTCA
TCAGGAAAGC AGCTCCCTTC TCGAGCCCTT CATATCGTGG GCCCTGATCA TCAGGTGAAA CTGAGCTTTC TTTACCCGGC GTCGACTGGC CGGAACATGG ATGAAGTAGT AAGGGCATTG
GACTCTCTGC AGAAGGCACT GAAGCATAAG GTTGCAACGC CTGCAAACTG GAAGCAGGGA GATCCGGTGG TGATATCACC AAGTGTGTCT AGTGATCAAG CCAAAGAGAC GTTCCCTCAA
GGTTTTGAGA CTGTGGATCT TCCATCCAAG AAAGAGTACT TGCGTTTCAC CAATGTCTAA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
TCTCTTTGCT TTCAAAATGC CTGGCCTCAC AATTGGAGAT TCTGTTCCCA ACCTTCAAGT CCAAACCAAT CAAGGAAACT TTAAGCTTCA TGACTTCATC GGTGATAACT GGACCATTAT
CTTCTCTCAC CCAGGTGATT TCACTCCTGT GTGCACAACT GAACTTGGCA AGATGGCTGC TTATGTTCCA GAGTTTGATA AGAGAGAAGT GAAGCTTCTG GGTTTGTCCT GTGATGACGT
TAAGTCACAC AATGAGTGGA TCAAAGACAT TGAAGCCTAC ACACCTGGTT GCAAGGTCTC ATATCCAATC ATCGCAGATC CCAATCGAGA GATCATCAAG CAACTCAACA TGGTGGACCC
GGATGAAAAA GATTCATCAG GAAAGCAGCT CCCTTCTCGA GCCCTTCATA TCGTGGGCCC TGATCATCAG GTGAAACTGA GCTTTCTTTA CCCGGCGTCG ACTGGCCGGA ACATGGATGA
AGTAGTAAGG GCATTGGACT CTCTGCAGAA GGCACTGAAG CATAAGGTTG CAACGCCTGC AAACTGGAAG CAGGGAGATC CGGTGGTGAT ATCACCAAGT GTGTCTAGTG ATCAAGCCAA
AGAGACGTTC CCTCAAGGTT TTGAGACTGT GGATCTTCCA TCCAAGAAAG AGTACTTGCG TTTCACCAAT GTCTAAAGCT TCACCAGTTT CCATTTAGCT AAGCAATAGA TAAATAGTTG
ACCATGCATG TTATATACGT TCGTTGATAT ATTATACAAT ACATGCAAGC GCAAAAAAAA AG
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Retrieve as FASTA
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