Entry information : HaFer04 (HanXRQChr16g0509611)
Entry ID 13700
Creation 2016-05-12 (Christophe Dunand)
Last sequence changes 2017-12-08 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2017-12-08 (Christophe Dunand)
Peroxidase information: HaFer04 (HanXRQChr16g0509611)
Name (synonym) HaFer04 (HanXRQChr16g0509611)
Class Ferritin    [Orthogroup: Fer003]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaFer04
start..stop
S start..stop
HaFer05 507 0 1..247 1..247
HaFer03 342 2.36e-120 19..244 21..246
ThasFer04 341 8.07e-120 33..240 51..257
SpolFer02 339 4.14e-119 26..245 42..261
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '13700' 'join(64606794..64607056,64607699..64607782,64607855..64607915,64608054..64608141,64608256..64608317,64608464..64608529,64608611..64608674,64608952..64609004)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 64606794..64607056 261 N° 2 64607699..64607782 82 N° 3 64607855..64607915 59 N° 4 64608054..64608141 86
N° 5 64608256..64608317 60 N° 6 64608464..64608529 64 N° 7 64608611..64608674 62 N° 8 64608952..64609004 51
join(64606794..64607056,64607699..64607782,64607855..64607915,64608054..64608141 ,64608256..64608317,64608464..64608529,64608611..64608674,64608952..64609004)


exon

Literature and cross-references HaFer04 (HanXRQChr16g0509611)
DNA ref. HanXRQ genome:   HanXRQChr16 (64606794..64609004)
Protein sequence: HaFer04 (HanXRQChr16g0509611)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   247 (151)
PWM (Da):   %s   27700.01 (15435.4) Transmb domain:   %s   i5-27o
PI (pH):   %s   5.07 (6.50) Peptide Signal:   %s   cut: 24 range:24-174
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSLQTPFSSASPFLLKNLGKSIGFVRSGVVRCGSSVGEENLVMSS
GVLFQPFEEVKKEEFIVPISPQKSLARQRYFDEPEAAINEQI
NVEYNVSYVYHALYAYFDRDNIALKGLAKFFKESSEEEREHAEKLMQYNMRGGRVKLNTIVAPPSEFEHVEKGDALYAMELALSLEKLVNEKLLCLHVADRNNDPQMADFIESEFLVEQV
EAIKKISEYVSQLRRVGKGH
GVWHFDQMLLDGGGAAA

Retrieve as FASTA  
Remarks
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCTCTTCAAACACCATTCTCATCAGCATCACCATTTTTGTTGAAGAATCTGGGAAAATCGATCGGATTTGTGAGATCAGGGGTTGTGCGTTGTGGATCAAGTGTTGGTGAGGAGAAT
CTGGTGATGAGTAGTGGAGTGTTGTTTCAGCCGTTTGAAGAAGTAAAGAAGGAGGAGTTTATTGTGCCGATTTCGCCTCAAAAATCGCTTGCTCGTCAACGCTATTTTGATGAGCCTGAA
GCTGCCATTAACGAGCAAATTAA
AAGTAAGTTTTTCATTTTTTTATATGAAAAAACTGTGATATGTACATTTTTTTTTTGTATTCGATATATTGTTTATTTGGTGCTTACCTGGAGACAT
AGACACCTCTTTTCATGTAATTACTTTTTAAAATCCAGATATATGTTAGAATTGAAAAAGACCGAAGAAACAGTGAGTTTTGAGTGTGTTAATTGGAATTTGAAATGAAAGTGCTCAACA
AGATTTAATATATTTATTTATTGTAGACATATGTGATGATAGTTCATAGTTTTTGAATTTTAGTTACTTTTTTCGTCTATGTGATTTGTCAAAAATCACTATTTCAGTCCATTAGTTTAA
AAATTACGATTTGAGTCCCTGTGGTTTCACTTTGGTAACCATCTCAGTCCATCTCGTAACCATTTCAGTCCCTGTACTAACAAAATAAATGGATTGAAATGGTTATGAAAGTAAAACTAC
AGGGACTGAAATGGTTACGAAAGTGAAACCATAGGGACTGAAATCGCAAATTTTAAACTAATGGACTGAAGTAGTGATTTTTGACATACCAAAGGAACGAAAACAGTAGTTAACTCTACT
TTTAACTATATTATTGGAACTTTTAGCTTATGATTGGGTTTATTTTGTTTCTTTGTTAATGATGCAGTGTGGAATATAATGTCTCCTATGTGTACCATGCTTTGTATGCTTACTTTGATC
GGGACAACATAGCACTGAAGGGCCTTGCCAA
AAGTAAACAAATCACATAAACTCCAACCCCTTTTTATCTTTACATGCTTATAAACTTTCTTTTGTTTTTATCAGGTTCTTCAAGGAATC
AAGTGAAGAAGAAAGAGAACATGCTGAGAAGTTAATGCAATATCAG
AGGTCTTTTTCGCACTATTATTATTTTATAAGATTTTTAAACAACATAGTAATTAGTTCCTTTTATGCAAATCC
CATTGTTATACACACACATATATACATAAACATATACATCAGCAACTAAACCTTATATCTTTGTAGAATATGAGAGGTGGAAGAGTGAAGTTGAACACCATAGTTGCGCCACCTTCAGAG
TTTGAACATGTGGAAAAGGGAGATGCTTTATATG
TGGTAAGCACAACTCAGAAATTACCCATCAAGTACAATAATGATTTCAACTTAATTAGCAGTTGTTTAACAAATATTCATCCTTAT
TTCGCCTTTAATTTATAAATTATCTGTCAGCAATGGAGCTAGCGTTGTCTTTGGAGAAACTAGTCAATGAAAAGCTTCTTTGTTTGCACGCGCGGTATGCCGTTTTATCTTGATATTTAA
GTATTTTATATATCTCACATGATAACTAATGCTTGAGGAAGAACTTATCCCCAAATCCGGATCATGACACCTTGTCATACATACACTATGTTAAATATAAATGTGTTTTCCAAATTGAAG

GTGGCTGATAGGAACAATGATCCGCAAATGGCAGACTTCATTGAGAGCGAGTTTCTTGTTGAGCAG
AGGTGAAACTCCTAGTTGTTGATATATAAGTGTGTGTGATATATAAAAGTCTAA
TCTGCATTACTTTTTATGTTGTGTGGCAGGTTGAAGCAATAAAGAAAATTTCAGAATATGTTTCTCAACTGAGAAGAGTAGGGAAAGGCCATGTGGTAAGATTATTATCCTTATGACTTG
TAACTTATTCAACATACAATACAAGAGCAAAACTGTTTGGTCAACCTGATTAGTTATAGTTCATTTCAAACATGACTCGTTTATCAAATGGGTTAAAATGTCATTAAAATGATTCCAAAA
GTAAAAAAGGGGTTGATAGATTGTAATCGTGTTGTAAACGAGGTTAGTGGGTCGTACTTGTAAAACGATGTTTATTCAGAACTTTTTTACATTTAAATGGGCTAGTGGGTTGACTAACAA
TTTGAACTGCAGGGGTATGGCATTTTGATCAGATGCTTCTTGATGGGGGTGGTGCTGCTGCTGTT

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCTCTTCAAACACCATTCTCATCAGCATCACCATTTTTGTTGAAGAATCTGGGAAAATCGATCGGATTTGTGAGATCAGGGGTTGTGCGTTGTGGATCAAGTGTTGGTGAGGAGAAT
CTGGTGATGAGTAGTGGAGTGTTGTTTCAGCCGTTTGAAGAAGTAAAGAAGGAGGAGTTTATTGTGCCGATTTCGCCTCAAAAATCGCTTGCTCGTCAACGCTATTTTGATGAGCCTGAA
GCTGCCATTAACGAGCAAATTAA
TGTGGAATATAATGTCTCCTATGTGTACCATGCTTTGTATGCTTACTTTGATCGGGACAACATAGCACTGAAGGGCCTTGCCAAGTTCTTCAAGGAA
TCAAGTGAAGAAGAAAGAGAACATGCTGAGAAGTTAATGCAATATCAG
AATATGAGAGGTGGAAGAGTGAAGTTGAACACCATAGTTGCGCCACCTTCAGAGTTTGAACATGTGGAAAAG
GGAGATGCTTTATATG
CAATGGAGCTAGCGTTGTCTTTGGAGAAACTAGTCAATGAAAAGCTTCTTTGTTTGCACGCGGTGGCTGATAGGAACAATGATCCGCAAATGGCAGACTTCATT
GAGAGCGAGTTTCTTGTTGAGCAG
GTTGAAGCAATAAAGAAAATTTCAGAATATGTTTCTCAACTGAGAAGAGTAGGGAAAGGCCATGGGGTATGGCATTTTGATCAGATGCTTCTTGAT
GGGGGTGGTGCTGCTGCTGTT

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TTTAAATCTT CCTCCTCCTC ATCAGATCAA AACACACACA CACACACACA CACACACACA TTGATAACAA AATGTCTCTT CAAACACCAT TCTCATCAGC ATCACCATTT TTGTTGAAGA  ATCTGGGAAA ATCGATCGGA TTTGTGAGAT CAGGGGTTGT GCGTTGTGGA TCAAGTGTTG GTGAGGAGAA TCTGGTGATG AGTAGTGGAG TGTTGTTTCA GCCGTTTGAA GAAGTAAAGA  AGGAGGAGTT TATTGTGCCG ATTTCGCCTC AAAAATCGCT TGCTCGTCAA CGCTATTTTG ATGAGCCTGA AGCTGCCATT AACGAGCAAA TTAATGTGGA ATATAATGTC TCCTATGTGT  ACCATGCTTT GTATGCTTAC TTTGATCGGG ACAACATAGC ACTGAAGGGC CTTGCCAAGT TCTTCAAGGA ATCAAGTGAA GAAGAAAGAG AACATGCTGA GAAGTTAATG CAATATCAGA  ATATGAGAGG TGGAAGAGTG AAGTTGAACA CCATAGTTGC GCCACCTTCA GAGTTTGAAC ATGTGGAAAA GGGAGATGCT TTATATGCAA TGGAGCTAGC GTTGTCTTTG GAGAAACTAG  TCAATGAAAA GCTTCTTTGT TTGCACGCGG TGGCTGATAG GAACAATGAT CCGCAAATGG CAGACTTCAT TGAGAGCGAG TTTCTTGTTG AGCAGGTTGA AGCAATAAAG AAAATTTCAG  AATATGTTTC TCAACTGAGA AGAGTAGGGA AAGGCCATGG GGTATGGCAT TTTGATCAGA TGCTTCTTGA TGGGGGTGGT GCTGCTGCTG TTTGAAGAAT TTGGGTAGTC TAGCTAATGG  CATTAGGTGT GTGTTTGATG GTGTTTAATT CAGTTTAGTA ACTACTATGA ATCACGGGCT GTGGTTTCCG GTGAAGTTAT GTTATATGTT GGCTAGTTAA ACTACTTTTA ATTGCTATTG  TTGAATTTAT ATTGTTATTA TTATATTAGT TTTTAAACAT AAATTAAAGT GTGGTTTGTT GTCGGTTAAA ACATTCATTC AAAAGATTTA TTAAACATGT ATACTTTATC CGGTAATACT 
TCTTAAGAAA CATGACCGAT AGTC 

Retrieve as FASTA