View Redoxidase 13719

Entry information : HaPNC04 (HanXRQChr07g0202761)

Entry ID	13719
Creation	2016-05-13 (Christophe Dunand)
Last sequence changes	2016-05-13 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2017-11-23 (Catherine Mathe (Scipio))

Peroxidase information: HaPNC04 (HanXRQChr07g0202761)

Name (synonym)

HaPNC04 (HanXRQChr07g0202761)

Class

Plantacyanin [Orthogroup: PNC001]

Taxonomy

Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus

Organism

Helianthus annuus (Sunflower) [TaxId: 4232 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	HaPNC04 start..stop	S start..stop
HaPNC21	185	3.67e-62	1..123	1..126
HaPNC19	185	3.67e-62	1..123	1..126
HaPNC13	185	3.67e-62	1..123	1..126
HaPNC10	185	3.67e-62	1..123	1..126

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '13719' 'join(89096367..89096535,89096678..89096877)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	89096367..89096535	167	N° 2	89096678..89096877	198
join(89096367..89096535,89096678..89096877)

Literature and cross-references HaPNC04 (HanXRQChr07g0202761)

DNA ref.	HanXRQ genome: HanXRQChr07 (89096367..89096877)

Protein sequence: HaPNC04 (HanXRQChr07g0202761)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	123 (97)
PWM (Da):	12966.15 (10317.8)	Transmb domain:	o10-32i
PI (pH):	5 (4.63)	Peptide Signal:	cut: 27 range:27-123

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MAKGRGSAMMAMVVLCLVVVCEVAQAATYVVGDDNGWTFNVDGWE
KGKNFNAGDVLVFKYAKGSHNVVAVDEGGYYGCDVSPSEAKVYTSGNDQITLVKGNNSFICSFSDHCNSGMRLLISA

Retrieve as FASTA

Remarks

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCTAAGGGAAGAGGCAGTGCAATGATGGCAATGGTGGTTCTTTGTCTAGTAGTAGTATGCGAGGTAGCCCAGGCAGCTACTTATGTTGTCGGCGATGACAATGGCTGGACGTTTAAC
GTCGATGGCTGGGAAAAGGGCAAGAATTTCAATGCAGGCGACGTCCTTGTGGTATCCTCTCAACATCTTATTTATCACCACTTTAGATACATAATAATATGTGTTGATGATATTAACAAC
TTTTTTTTTATTAAGTTAATAATATAATAGTTTGTATTTAATTACTTGAATTGTTATTATATGATTGTAACAGTGTTTAAGTACGCAAAAGGATCACATAATGTGGTGGCTGTGGACGAG
GGAGGCTATTATGGATGCGACGTATCCCCAAGCGAGGCAAAGGTGTACACAAGTGGAAATGACCAAATTACCCTTGTGAAGGGTAATAACAGCTTCATTTGTAGTTTCTCTGATCACTGT
AATAGTGGCATGAGGCTTTTAATCTCTGCATCT

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCTAAGGGAAGAGGCAGTGCAATGATGGCAATGGTGGTTCTTTGTCTAGTAGTAGTATGCGAGGTAGCCCAGGCAGCTACTTATGTTGTCGGCGATGACAATGGCTGGACGTTTAAC
GTCGATGGCTGGGAAAAGGGCAAGAATTTCAATGCAGGCGACGTCCTTGTGTTTAAGTACGCAAAAGGATCACATAATGTGGTGGCTGTGGACGAGGGAGGCTATTATGGATGCGACGTA
TCCCCAAGCGAGGCAAAGGTGTACACAAGTGGAAATGACCAAATTACCCTTGTGAAGGGTAATAACAGCTTCATTTGTAGTTTCTCTGATCACTGTAATAGTGGCATGAGGCTTTTAATC
TCTGCATCT

Retrieve as FASTA

cDNA►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATCCCACAAA CGAAAAGACA TAATCTCTAG TTTGAGTGAA CCATGGCTAA GGGAAGAGGC AGTGCAATGA TGGCAATGGT GGTTCTTTGT CTAGTAGTAG TATGCGAGGT AGCCCAGGCA GCTACTTATG TTGTCGGCGA TGACAATGGC TGGACGTTTA ACGTCGATGG CTGGGAAAAG GGCAAGAATT TCAATGCAGG CGACGTCCTT GTGTTTAAGT ACGCAAAAGG ATCACATAAT GTGGTGGCTG TGGACGAGGG AGGCTATTAT GGATGCGACG TATCCCCAAG CGAGGCAAAG GTGTACACAA GTGGAAATGA CCAAATTACC CTTGTGAAGG GTAATAACAG CTTCATTTGT AGTTTCTCTG ATCACTGTAA TAGTGGCATG AGGCTTTTAA TCTCTGCATC TTAAACAACA AGATAATAGT ATTTGACTTT GAGTTATGGA ATAATGTGTT TCTTGCCTAT TTATTGTGTG
TCTTGTTATA AAT

Retrieve as FASTA