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Entry information : AtCSD01 (AT1G08830/CSD1)
Entry ID 13732
Creation 2016-05-24 (Christophe Dunand)
Last sequence changes 2016-05-24 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2016-10-20 (Christophe Dunand)
Peroxidase information: AtCSD01 (AT1G08830/CSD1)
Name (synonym) AtCSD01 (AT1G08830/CSD1)
Class Cu/Zn SOD    [Orthogroup: CSD001]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis
Organism Arabidopsis thaliana    [TaxId: 3702 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AtCSD01
start..stop		 S start..stop
TsCSD01 287 7.19e-102 1..153 1..153
NoffCSD01-1A 280 4.92e-99 1..152 1..152
NoffCSD01-1B 278 3.54e-98 1..152 1..152
LeCSD01 261 1.39e-91 1..153 1..153
Literature and cross-references AtCSD01 (AT1G08830/CSD1)
Omic ref. AtProteome:   At1g08830 ATTED-II:   At1g08830 e-FP Browser:   At1g08830 ePlant:   At1g08830 TAIR:   At1g08830
Protein sequence: AtCSD01 (AT1G08830/CSD1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   152 (325)
PWM (Da):   %s   15088.35 (34616.9)  
PI (pH):   %s   5.38 (4.33) Peptide Signal:   %s   cut: 26 range:26-350
Sequence
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Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAKGVAVLNS SEGVTGTIFF TQEGDGVTTV SGTVSGLKPG LHGFHVHALG DTTNGCMSTG PHFNPDGKTH GAPEDANRHA GDLGNITVGD DGTATFTITD CQIPLTGPNS IVGRAVVVHA 
DPDDLGKGGH ELSLATGNAG GRVACGIIGL QG* 

Retrieve as FASTA  
Remarks
DNA ►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCGAAAG GAGTTGCAGT TTTGAACAGC AGTGAGGGTG TTACGGGGAC TATCTTTTTC ACCCAGGAAG GCGATGGTAG TTCTTTATAA GAGTGCTTTA TAAGATCTTT GAAGCCTATC  TTTTTTTTCC TTCCTCTCAA ATGATTGAGT TCTTTGTTTG GGTTTTTTGC AGGTGTGACC ACTGTGAGTG GAACAGTTTC TGGCCTTAAG CCTGGTCTTC ATGGTTTCCA TGTCCATGCT  CTTGGTGACA CCACTAACGG TTGCATGTCT ACTGGTAACT CTTATGCATA CCTCTCTGCA AATTTTCAAT GGATTAGAAA CTTTTGGAGC TTATATTTAT GTTTCGTATT GGGAACTTTA  ATTATCGCCA AAAGTAACTG AACTTGTTAT TAAATTCCTA TTTTAGGTCC ACATTTCAAC CCCGATGGTA AAACACACGG TGCCCCTGAG GATGCTAATC GACATGCTGG TGATCTAGGA  AACATCACTG TTGGAGATGA TGGTATGCCT TCTCAACATT TGTATCCCTC ATCTCAAGCT TATTTAGAGC TGTTTTGCAT CAAATTTCGC TACTCTCTCA AATTTGATTT TGCAGTCTTA  GTTGTATAGT ACAGTTGTCA CCTTTGACCA GCGGTAGTGT TCATGGATTT ACATAAAAGC TTTTGTTTTG CTTTTCTCAG GAACTGCCAC CTTCACAATC ACTGATTGCC AGGTTTATAG  CTGTGTACCT TTTTATGCTT TTTTCCTAAT CCAAACCTGC TGTAGTGAAC CAATCTCTTA AGATACATTT TGTGTTGGCT TAACAGATTC CTCTTACTGG ACCAAACTCT ATTGTTGGTA  GGGCTGTTGT TGTCCATGCA GACCCTGATG ACCTCGGAAA GGGTAATGAC CTTTGACCAT TTATTTTCTT GAGATTTTAT TTACCCATAT TATGCTAACA GAATTTAAAA GTTAGCCAGT  CCGTTTGAGG GCATCCAATG TAGAATGCTT ATGATTCAAC ATCCATCCTA AGAACAGTTT ATAACCTAGT GTCATTGGTG TTTTACATTT CAGGAGGCCA TGAACTCAGC CTGGCTACTG  GAAACGCAGG CGGCCGTGTT GCTTGCGGTA AGTAAAACAA AATTACATTT TTCTCACATC TCCTGTGAAA ACCATGTATA TTCTATTTAA TCTTGATCAT TACCATCATT GTCACCTTAG  ACTCCATTGA TTCTCTGGTA ACTCGGGGTT CATCTTGGTT TATCTATTGA CTATTATTAT CTTGCATTTT GGGGGTCCAA CTGAATGGTA AAATTATCAA ACTGATTGAC CTTTTGTCTA 
TGACTTCGCA GGCATCATTG GTCTCCAGGG CTAA 

Retrieve as FASTA  
CDS►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCGAAAG GAGTTGCAGT TTTGAACAGC AGTGAGGGTG TTACGGGGAC TATCTTTTTC ACCCAGGAAG GCGATGGTGT GACCACTGTG AGTGGAACAG TTTCTGGCCT TAAGCCTGGT  CTTCATGGTT TCCATGTCCA TGCTCTTGGT GACACCACTA ACGGTTGCAT GTCTACTGGT CCACATTTCA ACCCCGATGG TAAAACACAC GGTGCCCCTG AGGATGCTAA TCGACATGCT  GGTGATCTAG GAAACATCAC TGTTGGAGAT GATGGAACTG CCACCTTCAC AATCACTGAT TGCCAGATTC CTCTTACTGG ACCAAACTCT ATTGTTGGTA GGGCTGTTGT TGTCCATGCA 
GACCCTGATG ACCTCGGAAA GGGAGGCCAT GAACTCAGCC TGGCTACTGG AAACGCAGGC GGCCGTGTTG CTTGCGGCAT CATTGGTCTC CAGGGCTAA 

Retrieve as FASTA