View Redoxidase 13733

Entry information : AtCSD02 (AT2G28190/CSD2/CZSOD2)

Entry ID	13733
Creation	2016-05-24 (Christophe Dunand)
Last sequence changes	2016-06-08 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2016-10-20 (Christophe Dunand)

Peroxidase information: AtCSD02 (AT2G28190/CSD2/CZSOD2)

Name (synonym)

AtCSD02 (AT2G28190/CSD2/CZSOD2)

Class

Cu/Zn SOD [Orthogroup: CSD001]

Taxonomy

Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis

Organism

Arabidopsis thaliana [TaxId: 3702 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	AtCSD02 start..stop	S start..stop
TsCSD02	349	5.92e-124	3..216	2..226
NoffCSD02-1B	339	1.52e-120	3..216	2..207
NoffCSD02-1A	324	2.1e-114	31..216	34..215
HaCSD04	311	3.11e-109	8..216	14..225

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '13733' 'join(1..265,686..747,835..874,967..1062,1157..1188,1285..1360,1517..1570,1731..1756)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	1..265	263	N° 2	686..747	60	N° 3	835..874	38	N° 4	967..1062	94
N° 5	1157..1188	30	N° 6	1285..1360	74	N° 7	1517..1570	52	N° 8	1731..1756	24
join(1..265,686..747,835..874,967..1062,1157..1188,1285..1360,1517..1570,1731..1 756)

Literature and cross-references AtCSD02 (AT2G28190/CSD2/CZSOD2)

Omic ref.	AtProteome: At2g28190 ATTED-II: At2g28190 e-FP Browser: At2g28190 ePlant: At2g28190 TAIR: At2g28190

Protein sequence: AtCSD02 (AT2G28190/CSD2/CZSOD2)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	216
PWM (Da):	22230.32
PI (pH):	7.02

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MAATNTILAFSSPSRLLIPPSSNPSTLRSSFRGVSLNNNNLHRLQSVSFAVKAPSKALTVVSAAKKAVAVLKGTSDVEGVVTLTQDDSGPTTVNVRITGLTPGPHGFHLHEFGDTTNGCI
STGPHFNPNNMTHGAPEDECRHAGDLGNINANADGVAETTIVDNQIPLTGPNSVVGRAFVVHELKDDLGKGGHELSLTTGNAGGRLACGVIGLTPL*

Retrieve as FASTA

Remarks

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCTGCCACCAACACAATCCTCGCATTCTCATCTCCTTCTCGTCTTCTCATTCCTCCTTCCTCCAATCCTTCAACTCTCCGTTCCTCTTTCCGCGGCGTCTCTCTCAACAACAACAAT
CTCCACCGTCTCCAATCTGTTTCCTTCGCCGTTAAAGCTCCGTCGAAAGCGTTGACAGTTGTTTCCGCGGCGAAGAAGGCTGTTGCAGTGCTTAAAGGTACTTCTGATGTCGAAGGAGTT
GTTACTTTGACCCAAGATGACTCAGAGGTCCGTCTCTCTCAATTGCTCAAAATCTCTAATTTCTCATCTGGGTTTCTGAAGATTGATTTGATGGGCATGATTAGGTCACTCTCAGTGTTC
AATCTGCTTCGTATCTGACTTTCAATATCTTCAAAGTCTCAGACTTTTTCTGTTTAATCTGCTTCATATCTGATTTTCGGTTTCTTCAAAGTTTCAGACTTTTTCTGTTTAATCTGTTGA
GTTACATTTGTTAGTGTTTGGTTCTCACTGCTATGAATAACTTAAGATAAGCTGATAAAGAAAGGGATTAGCTTTAAGAGTGTTTTGCATATTCTTGCTGATTCAATGGTTCTGTGAAAG
TTTACAAAGTAACCCTATATGGTTTCTTGCTAATTTTTGACTATGTAGATTGTTCTAAGTGAATATGGTTGTGTTTATGGCAAGCAGGTCCTACAACTGTGAATGTTCGTATCACTGGTC
TCACTCCAGGGCCTCATGGATTTCATCTCTCGTAAGCTTGTTCCTCCTCGGAAGAATGAATCATCTGTTCTTCTTATAGCTATAATGGTGTAATTATGTCCTCTGTTTGATTTTGCAGCA
TGAGTTTGGTGATACAACTAATGGATGTATCTCAACAGAGGTTAATAGCAAAACCCCTGTGGCAGATTCTTTTGATACTGATGTCATGATTTGCCAAATTCTAAGACGATATCTTGTCTT
ATATTCTTGTAGGACCACATTTCAACCCTAACAACATGACACACGGAGCTCCAGAAGATGAGTGCCGTCATGCGGGTGACCTGGGAAACATAAATGCCAATGCCGATGTGGTATTTTACA
TCCTCCATTCAAGTTCCCATACAATTTGGCTGTCTTCGATAATCAAAAACCTGTTTGAACTAAGTACTGTTTTTGTAACAACAGGCGTGGCAGAAACAACAATAGTGGACAATCAGAGGT
TGGTGCTATCGCATGTTTTTCCTATAAGAAGTATATTGCTTCTCATATTTTCTCTTATAAGAAGCTTTTGTTTACTGTGAACTTGATTGTGTAGATTCCTCTGACTGGTCCTAATTCTGT
TGTTGGAAGAGCCTTTGTGGTTCACGAGCTTAAGGATGACCTCGGAAAGGGGGTAAACCATTATACTTTACTTCCAAGTCTCGATACATCAATTGGCACGGTTGCACTAATGAATTGTTA
ATAAAAAGGATGGCTCTTTCCTAGCTTATAAATGTCTCTTAAGCCAAGTTATGATATGATATTACTCTCTTTGATTTGACAAATATAGGTGGCCATGAGCTTAGTCTGACCACTGGAAAC
GCAGGCGGGAGATTGGCATGTGTGGTATGTTTAAACTTTCTATCACTATGACTTAGGCTGCGATTGTTTCAAACGCCAAAAATTGTGGTTTCATTCGAAGAAAACACACTTGATTATAAC
GTTTAATCGCAAATTCGGACCATCTGTTTCGGTATCCTCACGAGTTATGTTGGTTCTTTCGCAGGTGTGATTGGCTTGACGCCGCTCTAA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA