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Entry information : HaFSD01 (HanXRQChr08g0223311)
Entry ID 13744
Creation 2016-05-24 (Christophe Dunand)
Last sequence changes 2016-05-24 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaFSD01 (HanXRQChr08g0223311)
Name (synonym) HaFSD01 (HanXRQChr08g0223311)
Class FeSOD    [Orthogroup: FSD002]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaFSD01
start..stop		 S start..stop
HaFSD03 403 2.27e-143 1..270 3..255
LeFSD02 373 1.09e-130 1..260 1..259
NoffFSD02-1B 369 2.33e-129 4..273 1..275
AtFSD02 369 2.97e-129 33..300 36..300
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 59052919..59052976 56 N° 2 59052804..59052847 42 N° 3 59051752..59051826 73 N° 4 59051289..59051649 359
N° 5 59050585..59050703 117 N° 6 59050433..59050459 25 N° 7 59050310..59050333 22 N° 8 59049873..59050085 211
complement(join(59049873..59050085,59050310..59050333,59050433..59050459,5905058 5..59050703,59051289..59051649,59051752..59051826,59052804..59052847,59052919..5 9052976))


exon

Literature and cross-references HaFSD01 (HanXRQChr08g0223311)
DNA ref. HanXRQ genome:   HanXRQChr08 (59052976..59049873)
Protein sequence: HaFSD01 (HanXRQChr08g0223311)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   307
PWM (Da):   %s   34770.02  
PI (pH):   %s   4.79
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MASVTTIASHPTSAFISTPEFSRLSQSLHSSQRRRCSRKSVCGTISASIDLKPPPYALNALEPHMSKETLEYHWGKHHRGYVNNLNKQIEGTELDEMSLESIISASYNKGDILPAFNNAA
QVWNHEFFWESMKPGGGGKPSGELLELINRDFGSFEGLIHEFKLAATTQFGSGWAWLAYKEHKLDIPNARNPRPSEEDRKLVVVKSPNATNPLVWEYHPLLTLDVWEHAYYLDYENRRTD
YISTFLNKLVSWETVSSRLEAAKVLIADREREMAEIDAIDEMDTIEPEDGDMYFGSDADEFVDDD

Retrieve as FASTA  
Remarks
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGTCTGTCACCACAATCGCTTCCCATCCAACGTCCGCCTTTATTTCCACCCCAGGTTTTTCCATCATTTACTCCTATCCACACTTACTTGTTTCTATTGGATAATTAAATCTGAAT
CAATTGCAGAAAATTTTCTAGATTATCTCAGAGCTTACACTCGTCACAGAGGCAGGTCAGTTGTCTCTACTCAATTGTTTCCTTCAAATTCTCTAAAAAGAGATTCATGGTAGTAGATAA
AGTTGTTTGCTTTCTAGGGGTTTTGGGTATGTAAGCAAGGTGTTCGATGAAATGTCTGTCACTAAATAAAACTTTTATTTTTGTGTATCCGGGATTGAGAGAAGAAGTTATTCATTTTCT
AGCAACTTTTTTTAGGTTATAATGTGTCTGTGTTTGTTCTAAGCTGGACTTGTGTCATTAAGATTAGATGAAGTTGGTTACTAAAAAAAGATGCAATTTTTCCTGCTCATCATCATCATC
ATCATCATCATCATCATCATACACAGTATATCTCACCAATAGCAAAGCTAAGGTAGAGTTTGAGGAGGGTGAGATGTAGACAGCCTTACCTCTACCTGTAGGAATAGAAAGGCTGCTTCC
AATGAGACCCCCGGCTCGATTGTAGTTTTGCATCAAGCCTTGGACATAAGGCACATAACACTCAGCAATTGAGACAAACGCCTATTAGTGCATGTACCCCCTTGTCTTTCAGCTATCAAC
GCCACCACATGATGCATGATTAACCATCCCCCTCTTTTAACGTTATTTTCCTGCTATATATGAATATTCAAATGATCGTTGTCGTGTTTCTATATTAAAACCGATACCATTAAAGCAATT
TTCCAGTTGGTTTACAAAGGGTGAAGGTGAAGTATCAATTACAGAAAATGAAGTTCTGTTAGATGATATTCTTCATGAATTTTCATTTGCATAACTTCAATTTATAGTTCTCAAGTGTAT
TGAAAATTTCTAAAAGAATTCTCATTGCCCTAACTTTGAACTATAATTTCATGAGAAACACTATTTATGTTATGATACCGTTGTGTTGCAAGTGCAAATGACGATATTGGCTAAAAGATG
CGCTCTTTGATTCTATATAGATTTTGTTATTTCCATTTACTGTTTTTTGAAGAAACTAAATTTATGGTACAGAGAGACGGTGTAGTAGAAAATCTGTTTGTGGGACAATATCAGCCAGCA
TCGATTTGAAGCCACCTCCTTATGCATTGGTACGACGAATAATCGAATATATATCTCATAACTGTACTATAAGTTAAGTAATTTAATTATTTCTGTAATATATCTTCTATTTCCTGTTGC
GTGTATGGCAGAAAATGCTTTGGAACCACATATGAGCAAAGAGACATTGGAATATCATTGGGGAAAACACCACAGAGGTTATGTCAACAATCTAAACAAGCAGATTGAGGGAACCGAGTT
AGATGAAATGTCATTAGAAAGCATAATATCTGCTTCTTATAATAAAGGCGATATTCTTCCCGCCTTCAACAATGCTGCACAGGTTTGGAACCATGAATTTTTCTGGGAATCTATGAAACC
TGGTGGCGGTGGAAAGCCTTCGGGGGAACTTTTAGAATTAATAAACCGAGATTTCGGTTCATTCGAAGGCCTAATTCACGAGTTTAAGTTAGCTGCCACTACTCAGTTTGGTTCTGGTTG
GGCTTGGCTTGCATGTAAGCGTTTATTCCATCTAGGGGTGTGAATTTCTGACACATCCTGAAAACACCATACGAACCTAACATGAAATTCGCGGGTTTGGGTTTAGTCTAAAAGGGTTCA
AGTCTATTTCAGATTGAACCCGCAAACCCGTTTAGCTAAACGGGTCGGGTTCGGGTCAACCTGATTAACCCATTTATATTATATTATATAGTATTTTACCATATGTTTTATGTCATAAAT
TAAATTGGATGTGTATTTTATGCCATAACTATAACTTAAAAAGAGAAATTGACATAAGATCTTATAATTTATATTTAACTGTATTATATACATTTCTGTTTCTTGTAGTAAATTTTAATA
TATTAATTTGCAGAAAAAAATTAAAAAATTCGGGTGAACGGGTCGTGTTCGGGTCACCCCACGAATATTTGATTATTTGGGTCGTGTTCAGGTTCATCTAAAAGGTTCGGGTCGGGTTGA
ACCCACCAACCTGCAAACACAACCCGTTTAGCACCCCTAGTTCCATCAGATCCATAACCGAAAATTGGAAATTATATCGACCATTTTTCTTAAATCATTTTGATATTTTTTATTTGTAGA
TATAAAGAGCATAAACTTGACATACCAAATGCTAGGAATCCACGTCCCTCAGAAGAGGACAGGAAGCTTGTTGTGGTGAAGAGCCCGAATGCGACTAATCCTCTTGTGTGGGAGTACCAT
GTGAGTAGACAATAATACTATATACTTTTTGTTATCTTGATCTTAAATGAATCCTTAATTTTGTTGTTTTTCTTTGTGTTAAACTGTAACTGTTTTTTTTTTTTTTTTTTTTTTTGAATT
TCCAGCCCCACTCCTCACATTAGATGTTTGGGAGGTAAGATTTCTTCGCTTACATTTTCCGGTTTCTGCGATAAATAATCTATGTCGATGACGTATTCACTAACTTCACTTTGAATCTGA
TTTGTGATTGCAGCACATGCATACTACCTAGATTATGAGGTAAGAACTTGTTGATTCGATACAGGAAACAAATATACAAGCAACCCCTTTAGCCCATTTCATCTCACACTCTCACACACA
ATATGTGTGTGTGTGCACGTGTTGCGGGTGTCATACTAATAGTTTATGAATGTCCAAACACCCTTATTCATCACATGGTATAAATAAAGTGACCTTTTAGCCTGTCATACTAATAGTTTA
TGAATGTTTAATGTGTATTACAGAAAACCGTAGGACAGATTATATATCAACTTTCCTCAATAAGCTTGTATCATGGGAGACGGTGAGTTCCAGGCTCGAAGCAGCCAAGGTTTTAATAGC
AGATAGGGAAAGAGAGATGGCGGAAATCGATGCAATTGATGAGATGGACACAATAGAACCCGAGGATGGAGACATGTACTTTGGAAGCGACGCGGATGAATTTGTGGATGATGATGAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGTCTGTCACCACAATCGCTTCCCATCCAACGTCCGCCTTTATTTCCACCCCAGAATTTTCTAGATTATCTCAGAGCTTACACTCGTCACAGAGGCAGAGACGGTGTAGTAGAAAA
TCTGTTTGTGGGACAATATCAGCCAGCATCGATTTGAAGCCACCTCCTTATGCATTGAATGCTTTGGAACCACATATGAGCAAAGAGACATTGGAATATCATTGGGGAAAACACCACAGA
GGTTATGTCAACAATCTAAACAAGCAGATTGAGGGAACCGAGTTAGATGAAATGTCATTAGAAAGCATAATATCTGCTTCTTATAATAAAGGCGATATTCTTCCCGCCTTCAACAATGCT
GCACAGGTTTGGAACCATGAATTTTTCTGGGAATCTATGAAACCTGGTGGCGGTGGAAAGCCTTCGGGGGAACTTTTAGAATTAATAAACCGAGATTTCGGTTCATTCGAAGGCCTAATT
CACGAGTTTAAGTTAGCTGCCACTACTCAGTTTGGTTCTGGTTGGGCTTGGCTTGCATATAAAGAGCATAAACTTGACATACCAAATGCTAGGAATCCACGTCCCTCAGAAGAGGACAGG
AAGCTTGTTGTGGTGAAGAGCCCGAATGCGACTAATCCTCTTGTGTGGGAGTACCATCCACTCCTCACATTAGATGTTTGGGAGCATGCATACTACCTAGATTATGAGAACCGTAGGACA
GATTATATATCAACTTTCCTCAATAAGCTTGTATCATGGGAGACGGTGAGTTCCAGGCTCGAAGCAGCCAAGGTTTTAATAGCAGATAGGGAAAGAGAGATGGCGGAAATCGATGCAATT
GATGAGATGGACACAATAGAACCCGAGGATGGAGACATGTACTTTGGAAGCGACGCGGATGAATTTGTGGATGATGATGAG

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TAGAGCATAA CACCGTTAAC ACATTATTCT TTCAAAACCC AGAAACCCTC CCAAACCCCA ACCCAACTTA TCATTATCCT GTTACAATCT CTTCCAGTAA TGGCGTCTGT CACCACAATC  GCTTCCCATC CAACGTCCGC CTTTATTTCC ACCCCAGAAT TTTCTAGATT ATCTCAGAGC TTACACTCGT CACAGAGGCA GAGACGGTGT AGTAGAAAAT CTGTTTGTGG GACAATATCA  GCCAGCATCG ATTTGAAGCC ACCTCCTTAT GCATTGAATG CTTTGGAACC ACATATGAGC AAAGAGACAT TGGAATATCA TTGGGGAAAA CACCACAGAG GTTATGTCAA CAATCTAAAC  AAGCAGATTG AGGGAACCGA GTTAGATGAA ATGTCATTAG AAAGCATAAT ATCTGCTTCT TATAATAAAG GCGATATTCT TCCCGCCTTC AACAATGCTG CACAGGTTTG GAACCATGAA  TTTTTCTGGG AATCTATGAA ACCTGGTGGC GGTGGAAAGC CTTCGGGGGA ACTTTTAGAA TTAATAAACC GAGATTTCGG TTCATTCGAA GGCCTAATTC ACGAGTTTAA GTTAGCTGCC  ACTACTCAGT TTGGTTCTGG TTGGGCTTGG CTTGCATATA AAGAGCATAA ACTTGACATA CCAAATGCTA GGAATCCACG TCCCTCAGAA GAGGACAGGA AGCTTGTTGT GGTGAAGAGC  CCGAATGCGA CTAATCCTCT TGTGTGGGAG TACCATCCAC TCCTCACATT AGATGTTTGG GAGCATGCAT ACTACCTAGA TTATGAGAAC CGTAGGACAG ATTATATATC AACTTTCCTC  AATAAGCTTG TATCATGGGA GACGGTGAGT TCCAGGCTCG AAGCAGCCAA GGTTTTAATA GCAGATAGGG AAAGAGAGAT GGCGGAAATC GATGCAATTG ATGAGATGGA CACAATAGAA  CCCGAGGATG GAGACATGTA CTTTGGAAGC GACGCGGATG AATTTGTGGA TGATGATGAG TGATGGTTTT GGTGTTACGC AAGTGTAGTT TTGTATCGAG ATTTAGAAAC TAGTGTCAGA  ATTGTAATAT GGTTGTAATG CTTATAGTTA GATATATTAG ATAAGTGTAA TATTTAACAA CTTAGAAGTT TGAAATGGCA AGAGAGAATG ATTTTTTAGA GTAAACTTTA GTTTTACCCC 
CTGAGGTTTA TACAGGTGGA ATCACGTTTA CCC 

Retrieve as FASTA