Entry information : ClibAPx03 (GGEA-2063617)
Entry ID 13752
Creation 2014-11-19 (Bruno Savelli)
Last sequence changes 2016-05-24 (Bruno Savelli)
Sequence status partial
Reviewer Christophe Dunand
Last annotation changes 2016-05-24 (Christophe Dunand)
Peroxidase information: ClibAPx03 (GGEA-2063617)
Name (synonym) ClibAPx03 (GGEA-2063617)
Class Ascorbate peroxidase     [Orthogroup: APx009]*
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Cedrus
Organism cedrus libani    [TaxId: 93692 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value ClibAPx03
start..stop
S start..stop
ChaAPx04 275 1e-95 1..150 1..150
GbAPx06 274 7e-95 1..150 10..159
PabAPx01 272 1e-94 1..150 5..154
PtaAPx01 270 1e-93 1..150 5..154
Literature and cross-references ClibAPx03 (GGEA-2063617)
Protein sequence: ClibAPx03 (GGEA-2063617)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   150
PWM (Da):   %s   16393.38  
PI (pH):   %s   6.51
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
YPQVSEDYKL AVESCRRKLR GFIQEKHCAP LILRLAWHSA GTYDAKTKTG GPSGSIRNKE ELSHVANAGL DIAVKLLDPI KEQFPILSYA DFYQLAGVVA VEVTGGPSVP FHPGRTDHFD 
SPEEGRLPEA TGGSDHLRTI FNRMGLEDKD 

Retrieve as FASTA  
Remarks Partial sequence from RNA seq (short 5' and 3'ends are missing).
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TATCCTCAAG TAAGTGAGGA CTACAAATTG GCTGTTGAAA GCTGTCGCAG AAAGCTGAGA GGATTCATCC AAGAAAAACA CTGCGCTCCG CTGATCTTAC GACTAGCATG GCATTCCGCG  GGCACGTATG ACGCAAAGAC TAAAACCGGA GGGCCTTCTG GTAGCATCAG GAACAAGGAG GAACTCTCTC ATGTTGCGAA TGCAGGACTT GACATTGCGG TGAAGCTGCT GGATCCCATC  AAAGAACAGT TCCCCATTCT CAGCTATGCA GACTTTTATC AGCTTGCAGG GGTTGTAGCC GTTGAAGTTA CAGGAGGGCC CTCAGTACCT TTCCATCCAG GAAGGACGGA TCACTTTGAC 
AGCCCTGAAG AAGGCAGGCT ACCAGAGGCC ACCGGAGGCT CCGACCATCT TCGAACGATT TTCAACAGAA TGGGACTGGA AGATAAGGAC 

Retrieve as FASTA