View Redoxidase 13778

Entry information : HaRboh02 (HanXRQChr04g0125801)

Entry ID	13778
Creation	2016-06-01 (Christophe Dunand)
Last sequence changes	2016-06-01 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2017-11-23 (Catherine Mathe (Scipio))

Peroxidase information: HaRboh02 (HanXRQChr04g0125801)

Name (synonym)

HaRboh02 (HanXRQChr04g0125801)

Class

Respiratory burst oxidase homolog [Orthogroup: Rboh002]

Taxonomy

Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus

Organism

Helianthus annuus (Sunflower) [TaxId: 4232 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	HaRboh02 start..stop	S start..stop
HaRboh07	1620	0	2..922	1..914
VvRboh07	1391	0	2..922	1..917
DtriRboh04	1365	0	10..922	5..950
DgloRboh05	1357	0	13..922	11..927

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '13778' 'join(172845519..172846104,172846190..172846349,172847483..172847531,172847656..172847769,172847840..172848262,172848369..172848752,172848856..172848951,172849043..172849158,172849246..172849416,172849493..172849844,172849925..172850053,172850140..172850218,172850299..172850408)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	172845519..172846104	584	N° 2	172846190..172846349	158	N° 3	172847483..172847531	47	N° 4	172847656..172847769	112
N° 5	172847840..172848262	421	N° 6	172848369..172848752	382	N° 7	172848856..172848951	94	N° 8	172849043..172849158	114
N° 9	172849246..172849416	169	N° 10	172849493..172849844	350	N° 11	172849925..172850053	127	N° 12	172850140..172850218	77
N° 13	172850299..172850408	108
join(172845519..172846104,172846190..172846349,172847483..172847531,172847656..1 72847769,172847840..172848262,172848369..172848752,172848856..172848951,17284904 3..172849158,172849246..172849416,172849493..172849844,172849925..172850053,1728 50140..172850218,172850299..172850408)

Literature and cross-references HaRboh02 (HanXRQChr04g0125801)

DNA ref.	HanXRQ genome: HanXRQChr04 (172845519..172850408)
Cluster/Prediction ref.	HanXRQ: HanXRQChr04g0125801

Protein sequence: HaRboh02 (HanXRQChr04g0125801)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	922
PWM (Da):	103954.15	Transmb domain:	o359-378i494-516o543-565i722-739o
PI (pH):	9.42

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MMQSESPVSSRGGSDGRSTFSRMLDHPADHSNDSYGVGGAMLPIFLNDLRRNNNDQDLVEVTLELEDDSVILCSVTPTANHSNHHHHQHVPSQSSPAGAASRLRRKFSWLTSSSSRASSS
DASVDRVITSRDARKLKAKLIRTKSSAQRALGGLRFISKTTNTDVNELWKNVEARFACLAKDDGLLAREDFAECIGMADSKEFALGVFDALARRRQQKLGKITKAELHDFWLQISDQSFD
ARLQIFFDMADSNEDGRITRDEIQLLVLSAAANRLSKLKEQAEEYASLIMEELDPENLGYIELWQLETLLLQREAYMNYSRPLSIASGGWSQNLNSLKPKSVVHRLTHFVKSGLVENWQR
SWILLLWFLTMACLFTWKFKQYRNKAAFHVMGYCLTTAKGAAETLKLNMALILLPVCRNMLTFLRSTRARLFIPFDDNINFHKVIAFAIAVGIGLHAGNHMICDFPRLVNSSPEKFALIA
SDFHNKKPTYKELIVGVEGMTGISMLILMAFAFTLASRYFRKNVLKLPSPFNRLTGFNAFWFSHHLFGLVYILLLVHGSFLFLVHNWTQKTTWMYISVPILIYAAERSLRTGRSEHYSPK
IMKVSILPGDVFSIIMSKPSGFRYRSGQYIFLQCPSISPFEWHPFSLTSSPGDDYLSVHIRTVGDWTQELKQVLTNDTGSSCTIGRAKFRKLGEVDSKGLPKLLLDGPYGAPAQDYRNYD
VLLLVGLGIGATPFISILRDLLNNNRAVEDQTDSNTETSMSGDSLTSIASSSIASSNEKKKPRRTKSANFYWVTREPGSFEWFKGVMNEVAEIDHGQIEMHNYLTSVYEEGDARSTLITM
VQALTHAKHGVDILSGTRVRTHFARPNWREVFGKVASKHPNTTIGVFYCGMPVLAKELRKLSYEMSQKTSTRFEFHKEYF

Retrieve as FASTA

Remarks

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGATGCAATCTGAGTCTCCCGTCAGTAGCCGCGGTGGCTCTGACGGAAGATCCACTTTCAGCCGGATGCTAGACCATCCGGCTGATCATTCCAATGACAGTTACGGAGTTGGAGGAGCA
ATGCTCCCTATATTCCTCAACGATCTACGTCGAAACAACAATGATCAAGATTTAGTAGAAGTCACGTTAGAACTCGAAGATGATTCGGTCATTTTATGCAGTGTGACCCCGACCGCTAAC
CATTCAAACCATCATCATCATCAACATGTTCCTTCACAGTCGTCTCCAGCTGGGGCGGCCTCCAGGCTTCGTAGGAAGTTTTCGTGGCTGACGTCTTCTTCATCGCGAGCTTCTTCTTCG
GATGCAAGTGTGGACCGGGTGATCACGTCTAGAGATGCTAGAAAATTGAAAGCTAAACTGATTCGCACGAAATCTAGCGCGCAAAGAGCGCTAGGTGGTCTTCGGTTTATAAGTAAAACT
ACAAACACCGATGTTAACGAGTTGTGGAAAAACGTTGAGGCACGGTTTGCGTGTCTGGCTAAAGATGATGGATTATTAGCTCGAGAAGATTTCGCTGAATGCATAGAGGTGACGGTTAAG
TTTGATGATATGTTGTTACAATAAAACAAATTGGTCCAGTGTTTGTTAACTTATTGGTGTGTGTTTTTTGTAGGAATGGCGGATTCGAAGGAGTTTGCGTTGGGCGTATTCGATGCGTTG
GCGCGAAGAAGACAGCAGAAATTGGGGAAGATCACGAAAGCGGAGCTTCACGATTTTTGGTTACAGATTTCCGACCAGAGTTTTGACGCTCGTCTGCAGATATTCTTCGACATATGTATG
TCTCTCAAACTCTCTTTCTGTTATTAATCTTAAATCCCAAAACCCTAAAGACGCAAAAGTTCTGGTTCGCTAGAAAAATGGAGAAAGTCGAAGTCGAACATTTAATATTCGGATGGTAAG
TGGTGGAGAGTACTACGACGACATAGTGTATTTATCTTAGAAAATCTTACTCTTAAAAAAAAAAAGTTGAACATTCAATGGTTCTTTGAGCTAGTGAAATGACTAGGCAGCCCTCAAGTT
TCTTCAACCAAAAATTTAGAGTTGAGTTTTTGGTTGAAGGGGTAGTTTGGTCATTTGGCATGCTATGTACCCGAACCGGAATGCAAGGGTGCAGAATTTTAAAGATACAATAATAAAGTC
GACCGCATATGATTATTTTTTGTTGGGTTCAGAAAAGTGATGTTATATTCTATCTTTCTTCATATTGAAGAATAAAAAAGTGTGACAGTTTTCATTTCGAATTGTTTTTGGCCTTTTGGC
AACCAACTAAAATTATTTTATTGATTTAAACTTTGCATTTCTTTTGAGATAACGACTTGCTAACTAATAGAAAACTGCATACACCATATTCTTGAGCTACACTACTGACCAATTTGTAAT
TTTTGTTTAATGCTAAGCAAGATTTCATGATATCAATTTACACGGAAGCACAAATAATTATAGGAAAACTTTTTGAGAAAAAAAAAATATATTGATATGGAATGCTACATCAACACAATC
TAAATGGCAGGTGGAGTCAAATTTTCGAAAACTAAAATTGATTACCTAGAAATTAATTTGAATGTCTAAACAAACATGTAAATTAGTCAAATGATAGATTCACGCGTTTTTACAATCAAA
AGAAAATAAATTAAAAATGCTAAAGTTGGAAAAAAACTTCAAAATAAGGGGATTCCGATGATGAAACGTAGGCCAGAAAGTTCTATGGCGTTTGTCACATGATCCGGCATGTTGAGATGT
TTCTCTCCGTTATTTATGGGCAATGTAATTCTAAACGTGACGAAAGTTGTACTCTATTTAAATTAGACCAATTTTAGCCCATTTGCCACGTTCCAATTGATAAGTACGAGTTTGCTAGCT
CTGGGTCTCCTTAACAATCCATTCCTTTTTTCTTTCTTATGAACTTAGGGCCGACAGCAACGAAGATGGAAGAATCACAAGGGATGAGATACAAGAGAGGTATACATATCCGTAATTCGT
ACACAAATATTTTATCTTTTTTTATATATAATTTGATTTATAGGTTGATGGATTAGATCTTAATTAAATCATTTCTCTTACTAAATAACATTTATATATGCAGCTGCTAGTGCTTAGTGC
TGCAGCAAACAGATTGTCAAAGTTGAAAGAACAAGCAGAGGAATACGCTTCTTTGATTATGGAAGAATTAGACCCCGAAAATCTTGGCTATATTGAGAGGTACAATAGCTTAAAAACTCA
CTCTTACAACAAGTTTATCAAGAAATAGTACGCAACGGTTTCTTTTCAGTTATGGCAGTTGGAAACGCTTCTACTACAAAGGGAAGCTTACATGAACTACAGTAGACCTCTGAGCATAGC
AAGCGGCGGGTGGAGTCAAAATTTGAATTCACTGAAACCTAAAAGCGTTGTTCATAGGCTAACTCATTTTGTAAAGTCGGGTTTGGTGGAAAACTGGCAAAGAAGTTGGATTTTACTGCT
ATGGTTTTTAACCATGGCTTGTTTATTTACATGGAAATTTAAGCAGTATAGGAACAAGGCTGCTTTTCATGTCATGGGCTATTGTTTGACCACTGCTAAAGGGGCTGCTGAAACCCTCAA
ACTCAATATGGCTCTTATTCTTTTACCCGTTTGTAGAAACATGTTAACGTTCCTAAGGTCTACCCGAGCGCGATTGTTCATCCCTTTTGATGACAATATCAACTTTCACAAGAGGTAATC
GCTAATCAAGTAATCAGTAACTACCCTTTGAATATGATCTTATGATGTCGTATATACTATATACATGCCTTGAACTTGATAAGATCCATTTGGATTGCAGGTAATTGCTTTTGCAATAGC
TGTTGGCATCGGTTTGCACGCTGGAAATCATATGATTTGCGATTTTCCTCGGTTGGTAAACTCTTCACCAGAAAAGTTTGCTCTTATAGCATCAGATTTCCATAACAAGAAGCCGACATA
CAAGGAACTAATTGTCGGTGTGGAAGGCATGACTGGAATTTCAATGCTGATATTAATGGCCTTTGCGTTCACCTTAGCTTCGCGATATTTCAGAAAAAATGTTTTGAAGCTGCCATCACC
TTTCAACCGGTTAACTGGATTCAATGCATTCTGGTTTTCACATCATCTTTTTGGTTTGGTGTACATACTGCTTTTGGTTCATGGATCATTCTTGTTTTTGGTTCATAACTGGACTCAAAA
AACCCCGTAAGATGTTTGCTTTCTTGATTTTGGAAAACAATTAGTCAATTACGATAAATATATTATATTCATTTTTTTTTCACCAAGAATATACGTTTTAATTTCCCAGACGTGGATGTA
CATCTCGGTTCCAATTTTAATATACGCAGCTGAGAGAAGTCTACGAACAGGACGTTCAGAACACTACTCCCCTAAAATCATGAAGAGGTGAAAACATACTATAAATCAAGTAGACACTTT
ATCTATTATATTATTTACACAAAGTCTACTAATAATAACATGTTATTTTTCCCGTCAGGTTTCCATCCTACCAGGAGATGTATTCAGCATAATTATGTCAAAACCGAGTGGATTTAGATA
CCGGAGTGGACAGTACATATTTCTGCAATGCCCTTCAATCTCTCCATTTGAATGTGGTAGGTATTACATAATGTGTACACTTTATCCATCGGTTTATAGCGCACCATGCTGTTTTTTAAT
AAACCTTTTCGATAATCTTTCAGGCATCCGTTTTCATTGACTTCATCACCAGGAGACGATTACTTGAGCGTTCACATCCGGACAGTTGGAGACTGGACCCAAGAGTTGAAGCAAGTATTA
ACCAATGATACTGGTTCTTCATGTACGATTGGTCGAGCCAAATTTAGGAAGCTAGGGGAAGTGGATTCAAAAGGGGGTAACTTTATCTGGCATTAAGAAACTATATGGATGATGAAAACT
GAAAAAGTAAAGTGAAAAATTAAACAATGCAGTTTACCAAAGCTACTGTTGGACGGACCTTACGGTGCACCAGCGCAAGATTACAGGAACTATGACGTGTTACTTCTTGTTGGGCTAGGA
ATTGGAGCTACTCCTTTTATAAGTATTCTTAGAGATTTACTAAACAATAATCGGGCAGTAGAAGACCAAACAGATTCAAACACAGAAACGAGTATGTCAGGGGATAGTCTTACGAGTATA
GCATCTTCAAGTATCGCATCGTCAAATGAAAAGAAGAAACCAAGAAGGACTAAAAGTGCAAATTTCTATTGGGTCACTAGGGAGCCCGGCTCGTTTGAATGGTTTAAAGGAGTCATGAAT
GAAGTTGCGGAAATTGATCACAAAAAGTAATTAATAAACATGTTTTAATCTTGATACATGTCATTACAATATATTAATTGACTGGACTACGATTAATTTGAAACAGGGTCAAATCGAGAT
GCACAATTATCTTACAAGTGTTTATGAGGAAGGTGATGCAAGATCAACTTTGATCACTATGGTTCAAGCACTTACTCATGCCAAACATGGAGTTGACATCCTATCTGGCACTAGAGAGTA
TGATAATCCTAAATATCTTATTCAATACTACATTAATCTAAACGCTAGAATTAATCTAATAAGAAGCGTAAGTATTGTTGCAGGTAAGGACACATTTTGCTAGGCCGAATTGGAGAGAGG
TGTTTGGGAAGGTAGCATCGAAACATCCGAATACAACCATAGAGGTAAACAAATCTCTAAAACCACGATTTAGTCTATCAATTCGAATTGTGAGTCGAAGCTTATAAATTTGTTGATTAT
GTAGGAGTGTTCTATTGTGGGATGCCAGTGTTGGCTAAGGAGCTAAGGAAACTATCATATGAGATGAGCCAGAAGACATCGACACGATTTGAGTTCCACAAGGAGTACTTCTGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA

cDNA►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

TGTATAGTTT ATAATGGCAA GGTGGAAGTT GGAAAAGATA GGGGGTTAAA GAAACAAGAC TCAACTACTC TCAACACATA AGCGTTGAAT TCGTGTGCTC CCATCGTTTG CTTGTTTCAC AAATCCCTTT TCACTATGTG GTTTTCTTTC CATACATGTT GATGCAAATT CACGTTTATA TGTTTAACAC AATTTTAAGC AATCTACAAC AATGATGCAA TCTGAGTCTC CCGTCAGTAG CCGCGGTGGC TCTGACGGAA GATCCACTTT CAGCCGGATG CTAGACCATC CGGCTGATCA TTCCAATGAC AGTTACGGAG TTGGAGGAGC AATGCTCCCT ATATTCCTCA ACGATCTACG TCGAAACAAC AATGATCAAG ATTTAGTAGA AGTCACGTTA GAACTCGAAG ATGATTCGGT CATTTTATGC AGTGTGACCC CGACCGCTAA CCATTCAAAC CATCATCATC ATCAACATGT TCCTTCACAG TCGTCTCCAG CTGGGGCGGC CTCCAGGCTT CGTAGGAAGT TTTCGTGGCT GACGTCTTCT TCATCGCGAG CTTCTTCTTC GGATGCAAGT GTGGACCGGG TGATCACGTC TAGAGATGCT AGAAAATTGA AAGCTAAACT GATTCGCACG AAATCTAGCG CGCAAAGAGC GCTAGGTGGT CTTCGGTTTA TAAGTAAAAC TACAAACACC GATGTTAACG AGTTGTGGAA AAACGTTGAG GCACGGTTTG CGTGTCTGGC TAAAGATGAT GGATTATTAG CTCGAGAAGA TTTCGCTGAA TGCATAGGAA TGGCGGATTC GAAGGAGTTT GCGTTGGGCG TATTCGATGC GTTGGCGCGA AGAAGACAGC AGAAATTGGG GAAGATCACG AAAGCGGAGC TTCACGATTT TTGGTTACAG ATTTCCGACC AGAGTTTTGA CGCTCGTCTG CAGATATTCT TCGACATGGC CGACAGCAAC GAAGATGGAA GAATCACAAG GGATGAGATA CAAGAGCTGC TAGTGCTTAG TGCTGCAGCA AACAGATTGT CAAAGTTGAA AGAACAAGCA GAGGAATACG CTTCTTTGAT TATGGAAGAA TTAGACCCCG AAAATCTTGG CTATATTGAG TTATGGCAGT TGGAAACGCT TCTACTACAA AGGGAAGCTT ACATGAACTA CAGTAGACCT CTGAGCATAG CAAGCGGCGG GTGGAGTCAA AATTTGAATT CACTGAAACC TAAAAGCGTT GTTCATAGGC TAACTCATTT TGTAAAGTCG GGTTTGGTGG AAAACTGGCA AAGAAGTTGG ATTTTACTGC TATGGTTTTT AACCATGGCT TGTTTATTTA CATGGAAATT TAAGCAGTAT AGGAACAAGG CTGCTTTTCA TGTCATGGGC TATTGTTTGA CCACTGCTAA AGGGGCTGCT GAAACCCTCA AACTCAATAT GGCTCTTATT CTTTTACCCG TTTGTAGAAA CATGTTAACG TTCCTAAGGT CTACCCGAGC GCGATTGTTC ATCCCTTTTG ATGACAATAT CAACTTTCAC AAGGTAATTG CTTTTGCAAT AGCTGTTGGC ATCGGTTTGC ACGCTGGAAA TCATATGATT TGCGATTTTC CTCGGTTGGT AAACTCTTCA CCAGAAAAGT TTGCTCTTAT AGCATCAGAT TTCCATAACA AGAAGCCGAC ATACAAGGAA CTAATTGTCG GTGTGGAAGG CATGACTGGA ATTTCAATGC TGATATTAAT GGCCTTTGCG TTCACCTTAG CTTCGCGATA TTTCAGAAAA AATGTTTTGA AGCTGCCATC ACCTTTCAAC CGGTTAACTG GATTCAATGC ATTCTGGTTT TCACATCATC TTTTTGGTTT GGTGTACATA CTGCTTTTGG TTCATGGATC ATTCTTGTTT TTGGTTCATA ACTGGACTCA AAAAACCACG TGGATGTACA TCTCGGTTCC AATTTTAATA TACGCAGCTG AGAGAAGTCT ACGAACAGGA CGTTCAGAAC ACTACTCCCC TAAAATCATG AAGGTTTCCA TCCTACCAGG AGATGTATTC AGCATAATTA TGTCAAAACC GAGTGGATTT AGATACCGGA GTGGACAGTA CATATTTCTG CAATGCCCTT CAATCTCTCC ATTTGAATGG CATCCGTTTT CATTGACTTC ATCACCAGGA GACGATTACT TGAGCGTTCA CATCCGGACA GTTGGAGACT GGACCCAAGA GTTGAAGCAA GTATTAACCA ATGATACTGG TTCTTCATGT ACGATTGGTC GAGCCAAATT TAGGAAGCTA GGGGAAGTGG ATTCAAAAGG TTTACCAAAG CTACTGTTGG ACGGACCTTA CGGTGCACCA GCGCAAGATT ACAGGAACTA TGACGTGTTA CTTCTTGTTG GGCTAGGAAT TGGAGCTACT CCTTTTATAA GTATTCTTAG AGATTTACTA AACAATAATC GGGCAGTAGA AGACCAAACA GATTCAAACA CAGAAACGAG TATGTCAGGG GATAGTCTTA CGAGTATAGC ATCTTCAAGT ATCGCATCGT CAAATGAAAA GAAGAAACCA AGAAGGACTA AAAGTGCAAA TTTCTATTGG GTCACTAGGG AGCCCGGCTC GTTTGAATGG TTTAAAGGAG TCATGAATGA AGTTGCGGAA ATTGATCACA AAGGTCAAAT CGAGATGCAC AATTATCTTA CAAGTGTTTA TGAGGAAGGT GATGCAAGAT CAACTTTGAT CACTATGGTT CAAGCACTTA CTCATGCCAA ACATGGAGTT GACATCCTAT CTGGCACTAG AGTAAGGACA CATTTTGCTA GGCCGAATTG GAGAGAGGTG TTTGGGAAGG TAGCATCGAA ACATCCGAAT ACAACCATAG GAGTGTTCTA TTGTGGGATG CCAGTGTTGG CTAAGGAGCT AAGGAAACTA TCATATGAGA TGAGCCAGAA GACATCGACA CGATTTGAGT TCCACAAGGA GTACTTCTGA ACTAAAACAG TCCGTATAAT GTTATACATA CTTATATATT TTTTTTTATA CATTTGAATT TAAAAGAATG TAAATTTGTA CACCACGCAG CAGCTAGTGT AGGTAAACCT GTATAATTAG AGCAATACAA TTATAAGAAA
GTGAGAAACC GATAATATAC TCCTTCCATT TAGTTATACA AAGATTTTAA CAAGCTAAGA GCTCTA

Retrieve as FASTA