RedOxiBase: View Perox 13778

Entry information : HaRboh02 (HanXRQChr04g0125801)

Entry ID	13778
Creation	2016-06-01 (Christophe Dunand)
Last sequence changes	2016-06-01 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2017-11-23 (Catherine Mathe (Scipio))

Peroxidase information: HaRboh02 (HanXRQChr04g0125801)

Name (synonym)

HaRboh02 (HanXRQChr04g0125801)

Class

Respiratory burst oxidase homolog [Orthogroup: Rboh002]

Taxonomy

Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus

Organism

Helianthus annuus (Sunflower) [TaxId: 4232 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	HaRboh02 start..stop	S start..stop
HaRboh07	1620	0	2..922	1..914
VvRboh07	1391	0	2..922	1..917
DgloRboh05	1357	0	13..922	11..927
PtRboh09	1357	0	9..922	5..926

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	172845519..172846104	586	N° 2	172846190..172846349	160	N° 3	172847483..172847531	49	N° 4	172847656..172847769	114
N° 5	172847840..172848262	423	N° 6	172848369..172848752	384	N° 7	172848856..172848951	96	N° 8	172849043..172849158	116
N° 9	172849246..172849416	171	N° 10	172849493..172849844	352	N° 11	172849925..172850053	129	N° 12	172850140..172850218	79
N° 13	172850299..172850408	110
join(172845519..172846104,172846190..172846349,172847483..172847531,172847656..1 72847769,172847840..172848262,172848369..172848752,172848856..172848951,17284904 3..172849158,172849246..172849416,172849493..172849844,172849925..172850053,1728 50140..172850218,172850299..172850408)

Literature and cross-references HaRboh02 (HanXRQChr04g0125801)

DNA ref.	HanXRQ genome: HanXRQChr04 (172845519..172850408)
Cluster/Prediction ref.	HanXRQ: HanXRQChr04g0125801

Protein sequence: HaRboh02 (HanXRQChr04g0125801)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	922
PWM (Da):	103954.15	Transmb domain:	o359-378i494-516o543-565i722-739o
PI (pH):	9.42

Sequence 1232
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MMQSESPVSSRGGSDGRSTFSRMLDHPADHSNDSYGVGGAMLPIFLNDLRRNNNDQDLVEVTLELEDDSVILCSVTPTANHSNHHHHQHVPSQSSPAGAASRLRRKFSWLTSSSSRASSSDASVDRVITSRDARKLKAKLIRTKSSAQRALGGLRFISKTTNTDVNELWKNVEARFACLAKDDGLLAREDFAECIGMADSKEFALGVFDALARRRQQKLGKITKAELHDFWLQISDQSFDARLQIFFDMADSNEDGRITRDEIQLLVLSAAANRLSKLKEQAEEYASLIMEELDPENLGYIELWQLETLLLQREAYMNYSRPLSIASGGWSQNLNSLKPKSVVHRLTHFVKSGLVENWQRSWILLLWFLTMACLFTWKFKQYRNKAAFHVMGYCLTTAKGAAETLKLNMALILLPVCRNMLTFLRSTRARLFIPFDDNINFHKVIAFAIAVGIGLHAGNHMICDFPRLVNSSPEKFALIASDFHNKKPTYKELIVGVEGMTGISMLILMAFAFTLASRYFRKNVLKLPSPFNRLTGFNAFWFSHHLFGLVYILLLVHGSFLFLVHNWTQKTTWMYISVPILIYAAERSLRTGRSEHYSPKIMKVSILPGDVFSIIMSKPSGFRYRSGQYIFLQCPSISPFEWHPFSLTSSPGDDYLSVHIRTVGDWTQELKQVLTNDTGSSCTIGRAKFRKLGEVDSKGLPKLLLDGPYGAPAQDYRNYDVLLLVGLGIGATPFISILRDLLNNNRAVEDQTDSNTETSMSGDSLTSIASSSIASSNEKKKPRRTKSANFYWVTREPGSFEWFKGVMNEVAEIDHGQIEMHNYLTSVYEEGDARSTLITMVQALTHAKHGVDILSGTRVRTHFARPNWREVFGKVASKHPNTTIGVFYCGMPVLAKELRKLSYEMSQKTSTRFEFHKEYF

Retrieve as FASTA

Remarks

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGATGCAATCTGAGTCTCCCGTCAGTAGCCGCGGTGGCTCTGACGGAAGATCCACTTTCAGCCGGATGCTAGACCATCCGGCTGATCATTCCAATGACAGTTACGGAGTTGGAGGAGCA
ATGCTCCCTATATTCCTCAACGATCTACGTCGAAACAACAATGATCAAGATTTAGTAGAAGTCACGTTAGAACTCGAAGATGATTCGGTCATTTTATGCAGTGTGACCCCGACCGCTAAC
CATTCAAACCATCATCATCATCAACATGTTCCTTCACAGTCGTCTCCAGCTGGGGCGGCCTCCAGGCTTCGTAGGAAGTTTTCGTGGCTGACGTCTTCTTCATCGCGAGCTTCTTCTTCG
GATGCAAGTGTGGACCGGGTGATCACGTCTAGAGATGCTAGAAAATTGAAAGCTAAACTGATTCGCACGAAATCTAGCGCGCAAAGAGCGCTAGGTGGTCTTCGGTTTATAAGTAAAACT
ACAAACACCGATGTTAACGAGTTGTGGAAAAACGTTGAGGCACGGTTTGCGTGTCTGGCTAAAGATGATGGATTATTAGCTCGAGAAGATTTCGCTGAATGCATAGGTGACGGTTAAGTT
TGATGATATGTTGTTACAATAAAACAAATTGGTCCAGTGTTTGTTAACTTATTGGTGTGTGTTTTTTGTAGGAATGGCGGATTCGAAGGAGTTTGCGTTGGGCGTATTCGATGCGTTGGC
GCGAAGAAGACAGCAGAAATTGGGGAAGATCACGAAAGCGGAGCTTCACGATTTTTGGTTACAGATTTCCGACCAGAGTTTTGACGCTCGTCTGCAGATATTCTTCGACATGTATGTCTC
TCAAACTCTCTTTCTGTTATTAATCTTAAATCCCAAAACCCTAAAGACGCAAAAGTTCTGGTTCGCTAGAAAAATGGAGAAAGTCGAAGTCGAACATTTAATATTCGGATGGTAAGTGGT
GGAGAGTACTACGACGACATAGTGTATTTATCTTAGAAAATCTTACTCTTAAAAAAAAAAAGTTGAACATTCAATGGTTCTTTGAGCTAGTGAAATGACTAGGCAGCCCTCAAGTTTCTT
CAACCAAAAATTTAGAGTTGAGTTTTTGGTTGAAGGGGTAGTTTGGTCATTTGGCATGCTATGTACCCGAACCGGAATGCAAGGGTGCAGAATTTTAAAGATACAATAATAAAGTCGACC
GCATATGATTATTTTTTGTTGGGTTCAGAAAAGTGATGTTATATTCTATCTTTCTTCATATTGAAGAATAAAAAAGTGTGACAGTTTTCATTTCGAATTGTTTTTGGCCTTTTGGCAACC
AACTAAAATTATTTTATTGATTTAAACTTTGCATTTCTTTTGAGATAACGACTTGCTAACTAATAGAAAACTGCATACACCATATTCTTGAGCTACACTACTGACCAATTTGTAATTTTT
GTTTAATGCTAAGCAAGATTTCATGATATCAATTTACACGGAAGCACAAATAATTATAGGAAAACTTTTTGAGAAAAAAAAAATATATTGATATGGAATGCTACATCAACACAATCTAAA
TGGCAGGTGGAGTCAAATTTTCGAAAACTAAAATTGATTACCTAGAAATTAATTTGAATGTCTAAACAAACATGTAAATTAGTCAAATGATAGATTCACGCGTTTTTACAATCAAAAGAA
AATAAATTAAAAATGCTAAAGTTGGAAAAAAACTTCAAAATAAGGGGATTCCGATGATGAAACGTAGGCCAGAAAGTTCTATGGCGTTTGTCACATGATCCGGCATGTTGAGATGTTTCT
CTCCGTTATTTATGGGCAATGTAATTCTAAACGTGACGAAAGTTGTACTCTATTTAAATTAGACCAATTTTAGCCCATTTGCCACGTTCCAATTGATAAGTACGAGTTTGCTAGCTCTGG
GTCTCCTTAACAATCCATTCCTTTTTTCTTTCTTATGAACTTAGGGCCGACAGCAACGAAGATGGAAGAATCACAAGGGATGAGATACAAGAGGTATACATATCCGTAATTCGTACACAA
ATATTTTATCTTTTTTTATATATAATTTGATTTATAGGTTGATGGATTAGATCTTAATTAAATCATTTCTCTTACTAAATAACATTTATATATGCAGCTGCTAGTGCTTAGTGCTGCAGC
AAACAGATTGTCAAAGTTGAAAGAACAAGCAGAGGAATACGCTTCTTTGATTATGGAAGAATTAGACCCCGAAAATCTTGGCTATATTGAGGTACAATAGCTTAAAAACTCACTCTTACA
ACAAGTTTATCAAGAAATAGTACGCAACGGTTTCTTTTCAGTTATGGCAGTTGGAAACGCTTCTACTACAAAGGGAAGCTTACATGAACTACAGTAGACCTCTGAGCATAGCAAGCGGCG
GGTGGAGTCAAAATTTGAATTCACTGAAACCTAAAAGCGTTGTTCATAGGCTAACTCATTTTGTAAAGTCGGGTTTGGTGGAAAACTGGCAAAGAAGTTGGATTTTACTGCTATGGTTTT
TAACCATGGCTTGTTTATTTACATGGAAATTTAAGCAGTATAGGAACAAGGCTGCTTTTCATGTCATGGGCTATTGTTTGACCACTGCTAAAGGGGCTGCTGAAACCCTCAAACTCAATA
TGGCTCTTATTCTTTTACCCGTTTGTAGAAACATGTTAACGTTCCTAAGGTCTACCCGAGCGCGATTGTTCATCCCTTTTGATGACAATATCAACTTTCACAAGGTAATCGCTAATCAAG
TAATCAGTAACTACCCTTTGAATATGATCTTATGATGTCGTATATACTATATACATGCCTTGAACTTGATAAGATCCATTTGGATTGCAGGTAATTGCTTTTGCAATAGCTGTTGGCATC
GGTTTGCACGCTGGAAATCATATGATTTGCGATTTTCCTCGGTTGGTAAACTCTTCACCAGAAAAGTTTGCTCTTATAGCATCAGATTTCCATAACAAGAAGCCGACATACAAGGAACTA
ATTGTCGGTGTGGAAGGCATGACTGGAATTTCAATGCTGATATTAATGGCCTTTGCGTTCACCTTAGCTTCGCGATATTTCAGAAAAAATGTTTTGAAGCTGCCATCACCTTTCAACCGG
TTAACTGGATTCAATGCATTCTGGTTTTCACATCATCTTTTTGGTTTGGTGTACATACTGCTTTTGGTTCATGGATCATTCTTGTTTTTGGTTCATAACTGGACTCAAAAAACCGTAAGA
TGTTTGCTTTCTTGATTTTGGAAAACAATTAGTCAATTACGATAAATATATTATATTCATTTTTTTTTCACCAAGAATATACGTTTTAATTTCCCAGACGTGGATGTACATCTCGGTTCC
AATTTTAATATACGCAGCTGAGAGAAGTCTACGAACAGGACGTTCAGAACACTACTCCCCTAAAATCATGAAGGTGAAAACATACTATAAATCAAGTAGACACTTTATCTATTATATTAT
TTACACAAAGTCTACTAATAATAACATGTTATTTTTCCCGTCAGGTTTCCATCCTACCAGGAGATGTATTCAGCATAATTATGTCAAAACCGAGTGGATTTAGATACCGGAGTGGACAGT
ACATATTTCTGCAATGCCCTTCAATCTCTCCATTTGAATGGTAGGTATTACATAATGTGTACACTTTATCCATCGGTTTATAGCGCACCATGCTGTTTTTTAATAAACCTTTTCGATAAT
CTTTCAGGCATCCGTTTTCATTGACTTCATCACCAGGAGACGATTACTTGAGCGTTCACATCCGGACAGTTGGAGACTGGACCCAAGAGTTGAAGCAAGTATTAACCAATGATACTGGTT
CTTCATGTACGATTGGTCGAGCCAAATTTAGGAAGCTAGGGGAAGTGGATTCAAAAGGGTAACTTTATCTGGCATTAAGAAACTATATGGATGATGAAAACTGAAAAAGTAAAGTGAAAA
ATTAAACAATGCAGTTTACCAAAGCTACTGTTGGACGGACCTTACGGTGCACCAGCGCAAGATTACAGGAACTATGACGTGTTACTTCTTGTTGGGCTAGGAATTGGAGCTACTCCTTTT
ATAAGTATTCTTAGAGATTTACTAAACAATAATCGGGCAGTAGAAGACCAAACAGATTCAAACACAGAAACGAGTATGTCAGGGGATAGTCTTACGAGTATAGCATCTTCAAGTATCGCA
TCGTCAAATGAAAAGAAGAAACCAAGAAGGACTAAAAGTGCAAATTTCTATTGGGTCACTAGGGAGCCCGGCTCGTTTGAATGGTTTAAAGGAGTCATGAATGAAGTTGCGGAAATTGAT
CACAAAGTAATTAATAAACATGTTTTAATCTTGATACATGTCATTACAATATATTAATTGACTGGACTACGATTAATTTGAAACAGGGTCAAATCGAGATGCACAATTATCTTACAAGTG
TTTATGAGGAAGGTGATGCAAGATCAACTTTGATCACTATGGTTCAAGCACTTACTCATGCCAAACATGGAGTTGACATCCTATCTGGCACTAGAGTATGATAATCCTAAATATCTTATT
CAATACTACATTAATCTAAACGCTAGAATTAATCTAATAAGAAGCGTAAGTATTGTTGCAGGTAAGGACACATTTTGCTAGGCCGAATTGGAGAGAGGTGTTTGGGAAGGTAGCATCGAA
ACATCCGAATACAACCATAGGTAAACAAATCTCTAAAACCACGATTTAGTCTATCAATTCGAATTGTGAGTCGAAGCTTATAAATTTGTTGATTATGTAGGAGTGTTCTATTGTGGGATG
CCAGTGTTGGCTAAGGAGCTAAGGAAACTATCATATGAGATGAGCCAGAAGACATCGACACGATTTGAGTTCCACAAGGAGTACTTCTGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA

cDNA►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

TGTATAGTTT ATAATGGCAA GGTGGAAGTT GGAAAAGATA GGGGGTTAAA GAAACAAGAC TCAACTACTC TCAACACATA AGCGTTGAAT TCGTGTGCTC CCATCGTTTG CTTGTTTCAC AAATCCCTTT TCACTATGTG GTTTTCTTTC CATACATGTT GATGCAAATT CACGTTTATA TGTTTAACAC AATTTTAAGC AATCTACAAC AATGATGCAA TCTGAGTCTC CCGTCAGTAG CCGCGGTGGC TCTGACGGAA GATCCACTTT CAGCCGGATG CTAGACCATC CGGCTGATCA TTCCAATGAC AGTTACGGAG TTGGAGGAGC AATGCTCCCT ATATTCCTCA ACGATCTACG TCGAAACAAC AATGATCAAG ATTTAGTAGA AGTCACGTTA GAACTCGAAG ATGATTCGGT CATTTTATGC AGTGTGACCC CGACCGCTAA CCATTCAAAC CATCATCATC ATCAACATGT TCCTTCACAG TCGTCTCCAG CTGGGGCGGC CTCCAGGCTT CGTAGGAAGT TTTCGTGGCT GACGTCTTCT TCATCGCGAG CTTCTTCTTC GGATGCAAGT GTGGACCGGG TGATCACGTC TAGAGATGCT AGAAAATTGA AAGCTAAACT GATTCGCACG AAATCTAGCG CGCAAAGAGC GCTAGGTGGT CTTCGGTTTA TAAGTAAAAC TACAAACACC GATGTTAACG AGTTGTGGAA AAACGTTGAG GCACGGTTTG CGTGTCTGGC TAAAGATGAT GGATTATTAG CTCGAGAAGA TTTCGCTGAA TGCATAGGAA TGGCGGATTC GAAGGAGTTT GCGTTGGGCG TATTCGATGC GTTGGCGCGA AGAAGACAGC AGAAATTGGG GAAGATCACG AAAGCGGAGC TTCACGATTT TTGGTTACAG ATTTCCGACC AGAGTTTTGA CGCTCGTCTG CAGATATTCT TCGACATGGC CGACAGCAAC GAAGATGGAA GAATCACAAG GGATGAGATA CAAGAGCTGC TAGTGCTTAG TGCTGCAGCA AACAGATTGT CAAAGTTGAA AGAACAAGCA GAGGAATACG CTTCTTTGAT TATGGAAGAA TTAGACCCCG AAAATCTTGG CTATATTGAG TTATGGCAGT TGGAAACGCT TCTACTACAA AGGGAAGCTT ACATGAACTA CAGTAGACCT CTGAGCATAG CAAGCGGCGG GTGGAGTCAA AATTTGAATT CACTGAAACC TAAAAGCGTT GTTCATAGGC TAACTCATTT TGTAAAGTCG GGTTTGGTGG AAAACTGGCA AAGAAGTTGG ATTTTACTGC TATGGTTTTT AACCATGGCT TGTTTATTTA CATGGAAATT TAAGCAGTAT AGGAACAAGG CTGCTTTTCA TGTCATGGGC TATTGTTTGA CCACTGCTAA AGGGGCTGCT GAAACCCTCA AACTCAATAT GGCTCTTATT CTTTTACCCG TTTGTAGAAA CATGTTAACG TTCCTAAGGT CTACCCGAGC GCGATTGTTC ATCCCTTTTG ATGACAATAT CAACTTTCAC AAGGTAATTG CTTTTGCAAT AGCTGTTGGC ATCGGTTTGC ACGCTGGAAA TCATATGATT TGCGATTTTC CTCGGTTGGT AAACTCTTCA CCAGAAAAGT TTGCTCTTAT AGCATCAGAT TTCCATAACA AGAAGCCGAC ATACAAGGAA CTAATTGTCG GTGTGGAAGG CATGACTGGA ATTTCAATGC TGATATTAAT GGCCTTTGCG TTCACCTTAG CTTCGCGATA TTTCAGAAAA AATGTTTTGA AGCTGCCATC ACCTTTCAAC CGGTTAACTG GATTCAATGC ATTCTGGTTT TCACATCATC TTTTTGGTTT GGTGTACATA CTGCTTTTGG TTCATGGATC ATTCTTGTTT TTGGTTCATA ACTGGACTCA AAAAACCACG TGGATGTACA TCTCGGTTCC AATTTTAATA TACGCAGCTG AGAGAAGTCT ACGAACAGGA CGTTCAGAAC ACTACTCCCC TAAAATCATG AAGGTTTCCA TCCTACCAGG AGATGTATTC AGCATAATTA TGTCAAAACC GAGTGGATTT AGATACCGGA GTGGACAGTA CATATTTCTG CAATGCCCTT CAATCTCTCC ATTTGAATGG CATCCGTTTT CATTGACTTC ATCACCAGGA GACGATTACT TGAGCGTTCA CATCCGGACA GTTGGAGACT GGACCCAAGA GTTGAAGCAA GTATTAACCA ATGATACTGG TTCTTCATGT ACGATTGGTC GAGCCAAATT TAGGAAGCTA GGGGAAGTGG ATTCAAAAGG TTTACCAAAG CTACTGTTGG ACGGACCTTA CGGTGCACCA GCGCAAGATT ACAGGAACTA TGACGTGTTA CTTCTTGTTG GGCTAGGAAT TGGAGCTACT CCTTTTATAA GTATTCTTAG AGATTTACTA AACAATAATC GGGCAGTAGA AGACCAAACA GATTCAAACA CAGAAACGAG TATGTCAGGG GATAGTCTTA CGAGTATAGC ATCTTCAAGT ATCGCATCGT CAAATGAAAA GAAGAAACCA AGAAGGACTA AAAGTGCAAA TTTCTATTGG GTCACTAGGG AGCCCGGCTC GTTTGAATGG TTTAAAGGAG TCATGAATGA AGTTGCGGAA ATTGATCACA AAGGTCAAAT CGAGATGCAC AATTATCTTA CAAGTGTTTA TGAGGAAGGT GATGCAAGAT CAACTTTGAT CACTATGGTT CAAGCACTTA CTCATGCCAA ACATGGAGTT GACATCCTAT CTGGCACTAG AGTAAGGACA CATTTTGCTA GGCCGAATTG GAGAGAGGTG TTTGGGAAGG TAGCATCGAA ACATCCGAAT ACAACCATAG GAGTGTTCTA TTGTGGGATG CCAGTGTTGG CTAAGGAGCT AAGGAAACTA TCATATGAGA TGAGCCAGAA GACATCGACA CGATTTGAGT TCCACAAGGA GTACTTCTGA ACTAAAACAG TCCGTATAAT GTTATACATA CTTATATATT TTTTTTTATA CATTTGAATT TAAAAGAATG TAAATTTGTA CACCACGCAG CAGCTAGTGT AGGTAAACCT GTATAATTAG AGCAATACAA TTATAAGAAA
GTGAGAAACC GATAATATAC TCCTTCCATT TAGTTATACA AAGATTTTAA CAAGCTAAGA GCTCTA

Retrieve as FASTA