Entry information : CsPrx04 (orange1.1g045164m/Cs1g18600)
Entry ID 1379
Creation 2005-06-22 (Christophe Dunand)
Last sequence changes 2017-11-30 (Qiang Li)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2017-12-01 (Qiang Li)
Peroxidase information: CsPrx04 (orange1.1g045164m/Cs1g18600)
Name (synonym) CsPrx04 (orange1.1g045164m/Cs1g18600)
Class Class III peroxidase    [Orthogroup: Prx019]
Taxonomy Eukaryota Viridiplantae Streptophyta Rutaceae Citrus
Organism Citrus sinensis    [TaxId: 2711 ]
Cellular localisation N/D
Tissue types Seedlings
Whole seedlings
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CsPrx04
start..stop
S start..stop
CclPrx94 683 0 1..334 1..335
PtPrx08 536 0 5..329 7..331
CsPrx36 530 0 23..327 25..329
CclPrx33 528 0 23..327 25..329
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '1379' 'complement(join(50031..50452,50518..50683,50781..50969,51104..51252,51678..51756))' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 51678..51756 77 N° 2 51104..51252 147 N° 3 50781..50969 187 N° 4 50518..50683 164
N° 5 50031..50452 420  
complement(join(50031..50452,50518..50683,50781..50969,51104..51252,51678..51756 ))


exon

Literature and cross-references CsPrx04 (orange1.1g045164m/Cs1g18600)
Literature Bausher,M., Shatters,R., Chaparro,J., Dang,P., Hunter,W. and Niedz,R. An expressed sequence tag (EST) set from Citrus sinensis L. Osbeck whole seedlings and the implications of further perennial source investigations. Plant Sci. 165, 415-422 (2003).
DNA ref. Citrus sinensis Annotation Project:   chr1 (21579525..21581281) Phytozome 12:   scaffold00074 (51756..50031)
EST ref. GenBank:   CF653161
Protein sequence: CsPrx04 (orange1.1g045164m/Cs1g18600)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   334 (305)
PWM (Da):   %s   37566.78 (33984.0) Transmb domain:   %s   i7-26o (i7-26o)
PI (pH):   %s   6.67 (6.17) Peptide Signal:   %s   cut: 30 range:30-334
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MATKRHHHLCSSYFFLLLPLLLQFYSGESQLQFNYYAESCPKAEDIIKQQVINLYNKHGNTAVSWVRNLFHDCIVKSCDASLLLKKAGGIVSEQASERSFGMRNFRYVDTIKEALEEECP
VTVSCADIVALSAREGIVMLGGPRIEMKTGRRDSKESYFTEVDKLIPNHNDSLSTVLSAFQSTGIDVEGTVALLGAHSVGRVHCVNLVHRLYPTVDPSLNPEYGEYLKRRCPTPNPDPKA
VLYARNDPETPMIIDNNYYKNLLNQKGLLIVDQQLASDPRTAPFVEKMAADNGYFHQQFSRAVGLLSENNPLTEDQGEIRKDCRYANSNTNNVY*

Retrieve as FASTA  
Remarks Complete sequence from genomic and 2 ESTs (CF653161 and CK701406).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTACTAAGAGGCATCATCATCTTTGCTCAAGCTACTTCTTTCTGCTATTACCGTTGCTTTTGCAGTTTTATTCTGGTATTTTACTAATATATATACACACACTCTCTTATATGAGA
TGGTGGGGAAATTTAGCACTTTTATTGCGGTAGTTACTTTTTCAGAAAATTTTTTCGGGTACTTATGAACTGAAAAAGAAAAGCAAAATTTTATTTATTTTTAATATGACATAGTAATAA
AATGAGATGTGTGTGTTCTTGTATATTCAGTGTGCCATTCATTTGAATGTTTATAAATAAAAATACACACGGCTACGCGGAAAAAAAAAAATTGTTTTTAATATACATACACGTAATCCT
AATTGAAATAAAGTGTGCCACGAGCTACACATCCGCTAACATTTTGATTTGCTTTCTGAAATATTTTCTATGTAGCATGTTATAAATATACATATACCATNNNNNNNNNNNNNNNNNNNN
NNNTCTTGTTTGAATTTGACGCAGGTGTGAAAGCCAGCTCCAGTTTAATTATTATGCAGAGAGTTGTCCGAAAGCAGAGGACATCATAAAACAACAGGTCATTAACCTATACAACAAACA
TGGAAACACAGCAGTCTCGTGGGTCAGAAATCTTTTCCACGATTGCATCGTCAAG
GTTCGTATACATACATACATATATATATAGAACTCACATAGCATAATTTTGTTATCTTTAATATT
GTCATATTGATATAATGATCATAGCTTTGTTAATTTGCTACAACAATTAAGCTGCCCAAAAATTTGCAGTCTCATGTGATGCGTCGCTCTTGCTGAAGAAAGCGGGTGGTATTGTATCAG
AGCAGGCATCGGAAAGAAGTTTCGGCATGAGGAATTTCAGGTATGTGGACACAATCAAAGAAGCCCTCGAAGAAGAATGCCCAGTGACTGTTTCTTGTGCTGATATCGTCGCCCTGTCTG
CTAGAGAGGGCATCGTGATG
GTACGTTAATTAGTGCAAATAGAGAATAAAAAAAACTGATGCAACATTTAGTAGATTGAAATGAATATTGAATAGTGGGTGGGCGTGTTACTCACAGCTC
TGGGAGGACCACGCATTGAAATGAAAACCGGGCGGAGAGATAGCAAGGAAAGTTACTTCACAGAGGTGGACAAGTTGATCCCTAACCACAACGATAGCTTATCCACAGTGCTTTCTGCTT
TTCAATCTACTGGCATTGACGTTGAGGGAACTGTTGCTCTCCTAG
GTATATATTTTTAATTTCTTGTTTCATCATGAGCTTGACTGAATTGGCTTCTGTTTTCTGTGCAGGAGAGCCCAC
TCTGTAGGACGAGTTCATTGTGTCAATCTAGTGCACAGACTCTATCCCACCGTCGATCCAAGTTTAAATCCGGAATACGGAGAATACCTAAAACGCCGATGTCCAACGCCAAATCCGGAT
CCAAAGGCAGTGTTATATGCGAGAAACGACCCAGAAACGCCCATGATTATCGATAACAACTACTACAAGAACTTGCTAAACCAAAAGGGATTACTCATTGTTGATCAACAATTAGCTTCT
GATCCAAGAACCGCTCCTTTTGTTGAAAAGATGGCTGCTGATAATGGCTATTTCCACCAACAGTTTTCGAGGGCTGTGGGCTTGTTATCCGAGAATAATCCGCTTACTGAAGACCAAGGG
GAAATAAGAAAGGATTGTCGTTATGCAAATAGCAATACTAACAATGTTTACTGA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTACTAAGAGGCATCATCATCTTTGCTCAAGCTACTTCTTTCTGCTATTACCGTTGCTTTTGCAGTTTTATTCTGGTGAAAGCCAGCTCCAGTTTAATTATTATGCAGAGAGTTGT
CCGAAAGCAGAGGACATCATAAAACAACAGGTCATTAACCTATACAACAAACATGGAAACACAGCAGTCTCGTGGGTCAGAAATCTTTTCCACGATTGCATCGTCAAG
TCATGTGATGCG
TCGCTCTTGCTGAAGAAAGCGGGTGGTATTGTATCAGAGCAGGCATCGGAAAGAAGTTTCGGCATGAGGAATTTCAGGTATGTGGACACAATCAAAGAAGCCCTCGAAGAAGAATGCCCA
GTGACTGTTTCTTGTGCTGATATCGTCGCCCTGTCTGCTAGAGAGGGCATCGTGATG
CTGGGAGGACCACGCATTGAAATGAAAACCGGGCGGAGAGATAGCAAGGAAAGTTACTTCACA
GAGGTGGACAAGTTGATCCCTAACCACAACGATAGCTTATCCACAGTGCTTTCTGCTTTTCAATCTACTGGCATTGACGTTGAGGGAACTGTTGCTCTCCTAG
GAGCCCACTCTGTAGGA
CGAGTTCATTGTGTCAATCTAGTGCACAGACTCTATCCCACCGTCGATCCAAGTTTAAATCCGGAATACGGAGAATACCTAAAACGCCGATGTCCAACGCCAAATCCGGATCCAAAGGCA
GTGTTATATGCGAGAAACGACCCAGAAACGCCCATGATTATCGATAACAACTACTACAAGAACTTGCTAAACCAAAAGGGATTACTCATTGTTGATCAACAATTAGCTTCTGATCCAAGA
ACCGCTCCTTTTGTTGAAAAGATGGCTGCTGATAATGGCTATTTCCACCAACAGTTTTCGAGGGCTGTGGGCTTGTTATCCGAGAATAATCCGCTTACTGAAGACCAAGGGGAAATAAGA
AAGGATTGTCGTTATGCAAATAGCAATACTAACAATGTTTACTGA

Retrieve as FASTA