Entry information : CbraMSD02 (g360/ CHBRA09g00790)
Entry ID 13795
Creation 2016-06-21 (Christophe Dunand)
Last sequence changes 2016-06-21 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2016-10-20 (Christophe Dunand)
Peroxidase information: CbraMSD02 (g360/ CHBRA09g00790)
Name (synonym) CbraMSD02 (g360/ CHBRA09g00790)
Class Mn SOD    [Orthogroup: MSD002]
Taxonomy Eukaryota Viridiplantae Streptophyta Charophyceae Characeae Chara
Organism Chara braunii    [TaxId: 69332 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CbraMSD02
start..stop
S start..stop
CbraMSD01 360 1.05e-126 3..231 92..321
EsilMSD01 227 1.29e-74 3..231 91..298
HaMSD01 164 1.02e-50 5..221 26..223
PpaMSD01 163 1.55e-50 7..221 36..226
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '13795' 'complement(join(4881570..4881854,4884946..4885139,4886350..4886431,4902141..4902278)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 4902141..4902278 136 N° 2 4886350..4886431 80 N° 3 4884946..4885139 192 N° 4 4881570..4881854 283
complement(join(4881570..4881854,4884946..4885139,4886350..4886431,4902141..4902 278)


exon

Literature and cross-references CbraMSD02 (g360/ CHBRA09g00790)
Protein sequence: CbraMSD02 (g360/ CHBRA09g00790)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   232
PWM (Da):   %s   25843.67  
PI (pH):   %s   8.07
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGGPFKLPPL LYDMGALEPY IDAMTMKVHH GGHHATYVSK LNDAIKGKGE LESMKLVDLS QTAIKMGPAV RNNCGGHYNH TLFWTYMAPK GSSITKPTGN LQAAIDKNFG SFDQFQTAFN 
NACAGVFGSG WVWLGVAEDG RLSIETTANQ DNPLMDGVVL SQNTATGDRV PGTNGRKIIP FMGQDVWEHA YYLKYQNRKT EYFAAWWNVV NWNKICEYYD QYASKKLYIP VA* 

Retrieve as FASTA  
Remarks
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGTGGGC CGTTCAAGCT CCCGCCACTG CTGTACGATA TGGGTGCGCT GGAGCCGTAC ATCGATGCCA TGACGATGAA GGTACATCAT GGTGGTCATC ACGCGACGTA CGTCAGCAAG  CTGAATGATG CCATCAAGGG GAAAGGCGAA CTGGAGAGCA TGAAACTTGT GGATTTGAGC CAGACGGCAA TCAAGATGGG ACCTGCCGTT CGAAATAACT GTGGAGGTCA TTACAACCAC  ACACTGTTCT GGACGTACAT GGCCCCAAAG GGGTCATCCA TCACCAAGCC GACGGGTAAC CTTCAGGCAG CCATCGACAA AAATTTTGGG TCTTTCGATC AATTCCAGAC GGCCTTCAAC  AACGCATGTG CTGGAGTGTT TGGATCTGGA TGGGTGTGGT TGGGTGTTGC CGAGGATGGA AGATTGTCAA TCGAGACAAC GGCTAATCAG GATAATCCAT TGATGGACGG AGTTGTGCTG  AGCCAAAATA CTGCCACTGG TGATCGGGTG CCAGGCACGA ACGGAAGAAA GATTATACCC TTCATGGGAC AGGACGTTTG GGAGCATGCC TACTACCTCA AGTATCAGAA CCGAAAGACG 
GAGTACTTCG CAGCCTGGTG GAATGTAGTC AACTGGAACA AGATCTGCGA GTACTATGAC CAGTACGCTT CCAAGAAATT GTACATTCCT GTGGCTTGA 

Retrieve as FASTA