Sequence Properties
first value : protein
second value (mature protein)
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Length (aa):  |
331 (309) |
| PWM (Da): |
36112.13 (33702.8) |
Transmb domain: |
i7-29o (i7-29o) |
| PI (pH):
| 7.45 (7.47) |
Peptide Signal:
| cut: 23 range:23-331 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MVQFRCLLLV ALFTFSGVVV DAFGPGWYGY VGLRDDYYRS SCKDAEKVIK KAVQDELAKN LKHAAGVIRM HFHDCFVEGC DGSVLLDGPG TEKTADVNAK LAGYEVIDAA KAAVEAICPG
VVSCADILAY AARDSTVELN GTSWAVQGGR KDGTVSRASR AEAELPPPEF EVSELIDSFA RRGLSARQMV VLSGSHTVGV GHCDKFVARL YNFNSTHFTD PSIDPAYATE LKQICPQHTF
NTSIEVFMDV ITPRSAGEFE SNYYKTLQQH KGLFTSDQSL FDDSRTRATV KSLLNNRRFQ KEFGKAMRAM GAVGVKTLGQ IRTTCRAVNK Y
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Retrieve as FASTA
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| Remarks |
Complete sequence from genomic (contig_1101:5745-6140, part due to 3' border) and RNA seq (IHWO_Marchantia_paleacea-mycorrizal_proteins_421 and isotig29932) |
CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGTACAGT TCAGGTGTCT ACTTTTAGTC GCTCTCTTTA CGTTCTCTGG AGTGGTGGTG GATGCTTTTG GCCCCGGTTG GTATGGGTAC GTGGGATTGA GAGATGACTA TTACAGGAGT
TCATGCAAGG ACGCCGAAAA GGTGATTAAG AAGGCCGTTC AGGACGAGCT CGCCAAGAAC CTCAAGCATG CAGCTGGTGT CATTCGTATG CATTTCCATG ATTGCTTCGT TGAGGGTTGC
GATGGTTCTG TACTGCTCGA CGGGCCTGGA ACAGAGAAGA CCGCTGATGT TAACGCGAAG CTTGCAGGTT ATGAAGTTAT CGACGCTGCC AAAGCTGCCG TGGAAGCAAT CTGTCCAGGT
GTTGTTTCAT GCGCCGACAT CCTTGCTTAT GCAGCTCGCG ACAGCACAGT CGAGTTAAAC GGCACAAGCT GGGCCGTGCA AGGTGGAAGA AAAGATGGCA CTGTTTCCCG GGCCTCGAGA
GCCGAAGCGG AGCTGCCACC GCCGGAGTTC GAGGTTTCTG AGCTCATAGA TTCTTTTGCT CGAAGGGGAT TATCAGCCAG GCAGATGGTT GTTCTCTCCG GGTCGCACAC TGTGGGAGTG
GGACACTGCG ACAAATTCGT TGCGCGCCTT TACAACTTCA ACTCAACCCA CTTCACTGAT CCCTCAATCG ACCCTGCATA TGCCACAGAA CTGAAACAGA TATGCCCCCA GCACACTTTC
AACACCTCCA TCGAGGTGTT CATGGATGTT ATCACTCCGA GATCTGCAGG CGAGTTCGAG TCCAACTACT ACAAGACACT GCAGCAGCAC AAGGGCCTCT TCACATCCGA CCAATCGCTT
TTTGACGATT CCCGCACTAG AGCCACGGTG AAATCGCTGC TAAATAATCG TCGATTCCAG AAGGAGTTCG GAAAGGCTAT GCGCGCTATG GGAGCAGTAG GAGTCAAGAC CCTAGGCCAG
ATCCGCACCA CCTGTCGCGC GGTGAATAAA TACTAG
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
TACATATACA TAAGAACTCA CGAACGAGAC TGAAATTTGA AGCCTAGAAA GATTGCACAC GATGGTACAG TTCAGGTGTC TACTTTTAGT CGCTCTCTTT ACGTTCTCTG GAGTGGTGGT
GGATGCTTTT GGCCCCGGTT GGTATGGGTA CGTGGGATTG AGAGATGACT ATTACAGGAG TTCATGCAAG GACGCCGAAA AGGTGATTAA GAAGGCCGTT CAGGACGAGC TCGCCAAGAA
CCTCAAGCAT GCAGCTGGTG TCATTCGTAT GCATTTCCAT GATTGCTTCG TTGAGGGTTG CGATGGTTCT GTACTGCTCG ACGGGCCTGG AACAGAGAAG ACCGCTGATG TTAACGCGAA
GCTTGCAGGT TATGAAGTTA TCGACGCTGC CAAAGCTGCC GTGGAAGCAA TCTGTCCAGG TGTTGTTTCA TGCGCCGACA TCCTTGCTTA TGCAGCTCGC GACAGCACAG TCGAGTTAAA
CGGCACAAGC TGGGCCGTGC AAGGTGGAAG AAAAGATGGC ACTGTTTCCC GGGCCTCGAG AGCCGAAGCG GAGCTGCCAC CGCCGGAGTT CGAGGTTTCT GAGCTCATAG ATTCTTTTGC
TCGAAGGGGA TTATCAGCCA GGCAGATGGT TGTTCTCTCC GGGTCGCACA CTGTGGGAGT GGGACACTGC GACAAATTCG TTGCGCGCCT TTACAACTTC AACTCAACCC ACTTCACTGA
TCCCTCAATC GACCCTGCAT ATGCCACAGA ACTGAAACAG ATATGCCCCC AGCACACTTT CAACACCTCC ATCGAGGTGT TCATGGATGT TATCACTCCG AGATCTGCAG GCGAGTTCGA
GTCCAACTAC TACAAGACAC TGCAGCAGCA CAAGGGCCTC TTCACATCCG ACCAATCGCT TTTTGACGAT TCCCGCACTA GAGCCACGGT GAAATCGCTG CTAAATAATC GTCGATTCCA
GAAGGAGTTC GGAAAGGCTA TGCGCGCTAT GGGAGCAGTA GGAGTCAAGA CCCTAGGCCA GATCCGCACC ACCTGTCGCG CGGTGAATAA ATACTAGATG AATCCC
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Retrieve as FASTA
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