View Redoxidase 13888

Entry information : CgFSD01 (CgFeMnSOD1)

Entry ID	13888
Creation	2016-09-06 (Marcel Zamocky)
Last sequence changes	2016-10-10 (Christophe Dunand)
Sequence status	complete
Reviewer	Marcel Zamocky
Last annotation changes	2016-10-21 (Marcel Zamocky)

Peroxidase information: CgFSD01 (CgFeMnSOD1)

Name (synonym)

CgFSD01 (CgFeMnSOD1)

Class

FeSOD [Orthogroup: FSD001]

Taxonomy

Eukaryota Fungi Ascomycota Sordariomycetes Chaetomiaceae Chaetomium

Organism

Chaetomium globosum [TaxId: 38033 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	CgFSD01 start..stop	S start..stop
EsilFSD02	59	0.0000000000928	48..176	12..137
LeFSD03	59	0.000000000287	55..166	65..177
CbraFSD01	56	0.00000000367	18..167	51..195
TsFSD03	56	0.000000004	49..167	60..180

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '13888' 'join(1..241,303..1072)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	1..241	239	N° 2	303..1072	768
join(1..241,303..1072)

Literature and cross-references CgFSD01 (CgFeMnSOD1)

Literature	REFERENCE #1 Cuomo CA et al. (2015) Genome Announc. 3:E0002115 REFERENCE #2 Zamocky M et al. (2016) BMC Genomics 17:763
Protein ref.	GenBank: XP_001220211.1 UniProtKB: Q2HFL4
DNA ref.	GenBank: NT_165976 (3055543..3056614)
mRNA ref.	GenBank: XM_001220210.1
Cluster/Prediction ref.	Genebank: 4386400

Protein sequence: CgFSD01 (CgFeMnSOD1)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	336 (296)
PWM (Da):	36419.29 (31839.0)
PI (pH):	8.62 (8.73)	Peptide Signal:	cut: 20 range:20-315

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MLRPGLRIAMRPRVGAPARSTLLPLACQARSMHALAPLSYDLKGE
ATQNGISDFLSPAAFNISWTQYQTYLLQKLNILTAETDYESHQIKDILLGTARDPGSAPIFNHASMAHNNHFFFKHISPKPVEVPEPLRSRLEQSFGSMDTLRQEMVYTAAGMFGPGFVWLVKTSQPGLPVSFKVLTTYAAGSPYPAAHWRRQEH
DMNTAAGSGTEAGIATGRAYLDQTAYGTGSSSRWGSGGPGSATARRVAHAPGGTDLVPVLCINTWEHVWLWDYGFGVGAPDRGKLGYAEKWWKHVDWELVQKEADLQRLEMSANAGAPAP
SLSSPSLSSPAPVPRA

Retrieve as FASTA

Remarks

Complete from genomic (scafold 1, 1 intron). Strain=148.51 (CHGG_00990).

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGCTGCGCCCAGGGTTAAGGATAGCGATGCGCCCGCGAGTCGGTGCGCCCGCGAGGTCGACTTTGCTACCGCTGGCCTGCCAGGCACGATCCATGCACGCCCTCGCCCCTCTCTCTTAC
GACCTGAAGGGCGAGGCTACACAAAATGGCATTTCCGACTTCCTGTCGCCCGCCGCCTTCAACATCTCTTGGACCCAGTACCAGACATATCTGCTGCAGAAACTGAACATCTTGACAGCA
GAGGTGTGTTCTTTTCTCCCTCTCCTGTCCTATGTCTCTACAGGCAGACTAACAGACCCTCCAGAAACCGACTACGAATCCCACCAGATCAAGGACATCCTGCTCGGCACCGCCCGCGAC
CCGGGCTCGGCACCCATCTTCAACCACGCCAGCATGGCGCACAACAACCACTTCTTCTTCAAGCACATCTCGCCCAAGCCGGTCGAGGTGCCCGAGCCCCTGCGCAGCCGCCTCGAGCAG
TCCTTCGGCTCCATGGACACCCTCCGCCAGGAGATGGTCTACACGGCCGCCGGCATGTTCGGCCCGGGCTTCGTGTGGCTCGTCAAGACCTCGCAGCCGGGCCTGCCCGTATCCTTCAAG
GTCCTCACCACCTACGCCGCGGGGTCCCCCTACCCAGCAGCCCACTGGCGGCGGCAGGAGCACGACATGAACACCGCCGCCGGCAGCGGCACCGAGGCCGGCATCGCCACGGGCCGGGCC
TACCTCGACCAGACAGCGTACGGAACCGGCAGCAGCAGCCGGTGGGGCAGCGGGGGCCCGGGCAGCGCGACGGCGCGGCGGGTGGCGCACGCGCCGGGCGGCACGGACCTGGTCCCCGTG
CTGTGCATCAACACGTGGGAGCACGTGTGGCTGTGGGACTACGGCTTCGGCGTCGGCGCCCCCGACCGCGGCAAGCTGGGCTACGCCGAGAAGTGGTGGAAGCACGTCGACTGGGAGCTC
GTCCAGAAGGAGGCCGACCTGCAGCGCCTCGAGATGTCGGCCAACGCCGGCGCCCCCGCCCCCTCCCTCTCCTCCCCTTCCCTCTCCTCGCCTGCCCCCGTCCCCCGGGCATGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGCTGCGCCCAGGGTTAAGGATAGCGATGCGCCCGCGAGTCGGTGCGCCCGCGAGGTCGACTTTGCTACCGCTGGCCTGCCAGGCACGATCCATGCACGCCCTCGCCCCTCTCTCTTAC
GACCTGAAGGGCGAGGCTACACAAAATGGCATTTCCGACTTCCTGTCGCCCGCCGCCTTCAACATCTCTTGGACCCAGTACCAGACATATCTGCTGCAGAAACTGAACATCTTGACAGCA
GAAACCGACTACGAATCCCACCAGATCAAGGACATCCTGCTCGGCACCGCCCGCGACCCGGGCTCGGCACCCATCTTCAACCACGCCAGCATGGCGCACAACAACCACTTCTTCTTCAAG
CACATCTCGCCCAAGCCGGTCGAGGTGCCCGAGCCCCTGCGCAGCCGCCTCGAGCAGTCCTTCGGCTCCATGGACACCCTCCGCCAGGAGATGGTCTACACGGCCGCCGGCATGTTCGGC
CCGGGCTTCGTGTGGCTCGTCAAGACCTCGCAGCCGGGCCTGCCCGTATCCTTCAAGGTCCTCACCACCTACGCCGCGGGGTCCCCCTACCCAGCAGCCCACTGGCGGCGGCAGGAGCAC
GACATGAACACCGCCGCCGGCAGCGGCACCGAGGCCGGCATCGCCACGGGCCGGGCCTACCTCGACCAGACAGCGTACGGAACCGGCAGCAGCAGCCGGTGGGGCAGCGGGGGCCCGGGC
AGCGCGACGGCGCGGCGGGTGGCGCACGCGCCGGGCGGCACGGACCTGGTCCCCGTGCTGTGCATCAACACGTGGGAGCACGTGTGGCTGTGGGACTACGGCTTCGGCGTCGGCGCCCCC
GACCGCGGCAAGCTGGGCTACGCCGAGAAGTGGTGGAAGCACGTCGACTGGGAGCTCGTCCAGAAGGAGGCCGACCTGCAGCGCCTCGAGATGTCGGCCAACGCCGGCGCCCCCGCCCCC
TCCCTCTCCTCCCCTTCCCTCTCCTCGCCTGCCCCCGTCCCCCGGGCATGA

Retrieve as FASTA