Entry information : MsPrx16 (pxdD)
Entry ID 139
Creation 2006-09-07 (Christophe Dunand)
Last sequence changes 2006-09-07 (Christophe Dunand)
Sequence status complete
Reviewer reviewer name not stored
Last annotation changes 2010-04-14 (Christophe Dunand)
Peroxidase information: MsPrx16 (pxdD)
Name (synonym) MsPrx16 (pxdD)
Class Class III peroxidase    [Orthogroup: Prx011]
Taxonomy Eukaryota Viridiplantae Streptophyta Fabaceae Medicago
Organism Medicago sativa (alfalfa)    [TaxId: 3879 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value MsPrx16
start..stop
S start..stop
MtPrx42 650 0 1..325 4..328
GmPrx25 570 0 1..325 4..328
GmPrx104 568 0 1..325 4..328
TrPrx02 500 2e-180 2..325 6..329
Literature and cross-references MsPrx16 (pxdD)
Literature Abrahams et al Organ-specific expression of three peroxidase-encoding cDNAs from lucerne (Medicago sativa). unpublished
Protein ref. UniProtKB:   Q40367
mRNA ref. GenBank:   L36158.1
Protein sequence: MsPrx16 (pxdD)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   325 (303)
PWM (Da):   %s   35795.23 (33279.8)  
PI (pH):   %s   9.12 (9.09) Peptide Signal:   %s   cut: 23 range:23-325
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
LNLILVPLLF LTLFLHSCRT HAQLSRHHYK NSCPNVENIV RQAVKKKFHQ TFTTVPATLR LFFHDCFVQG CDGSILVAST PHNRAERDHP DNLSLAGDGF DTVIQAKAAV DAVPLCQNKV  SCADILAMAT RDVIALAGGP YYEVELGRFD GLRSKDSDVN GKLPEPGFNL NQLNTLFKHH GLTQTEMIAL SGAHTVGFSH CNKFTNRVYN FKTTSRVDPT LDLHYAAKLK SMCPRDVDPR 
VAVDMDPITP HAFDNVYFKN LQKGKGLFTS DQVLFTDSRS KAAVNAFASS NKIFRANFVA AMTKLGRVGV KNSHNGNIRT DCSVI 

Retrieve as FASTA  
Remarks Partial sequence from mRNA. Probably one or two residues are missing in the PS.
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CTTAATCTTA TACTTGTCCC GTTACTCTTC TTAACTCTCT TTCTTCATTC ATGTCGTACT CATGCCCAAT TAAGTAGACA CCACTACAAG AATTCTTGTC CTAATGTTGA AAACATTGTC  AGACAAGCTG TCAAAAAGAA ATTTCATCAA ACATTTACAA CAGTTCCTGC CACTCTACGT CTCTTCTTCC ATGACTGCTT TGTTCAGGGT TGTGATGGTT CTATTCTTGT AGCATCAACG  CCACATAATA GAGCAGAGAG GGATCACCCT GATAATCTTT CATTGGCTGG AGATGGATTT GATACTGTTA TACAAGCCAA AGCAGCTGTG GATGCTGTTC CTCTTTGCCA GAATAAAGTT  TCTTGTGCTG ATATTCTAGC TATGGCAACC CGTGATGTTA TTGCATTGGC AGGAGGACCA TACTATGAGG TAGAATTGGG AAGATTTGAT GGGCTAAGAT CTAAAGATTC TGATGTAAAT  GGAAAACTTC CTGAGCCAGG ATTCAACTTG AACCAGCTTA ATACATTGTT TAAACATCAC GGGCTTACAC AAACAGAAAT GATTGCACTT TCAGGAGCTC ACACCGTTGG ATTCTCACAT  TGCAACAAAT TCACCAATAG AGTGTACAAT TTCAAGACAA CAAGTCGAGT AGACCCTACA TTAGACTTAC ACTACGCAGC AAAATTAAAA TCAATGTGCC CAAGGGATGT GGATCCAAGG  GTTGCAGTTG ATATGGACCC AATTACTCCA CATGCCTTTG ATAATGTCTA TTTCAAGAAT CTACAAAAGG GGAAGGGTTT ATTCACCTCA GACCAAGTCC TCTTCACGGA TTCAAGATCC  AAAGCTGCAG TGAATGCTTT TGCTAGTAGT AACAAAATAT TTCGTGCCAA CTTTGTTGCT GCCATGACCA AATTGGGTCG AGTTGGTGTC AAGAATTCAC ACAATGGGAA CATTCGTACG 
GATTGTTCTG TGATTTAATT CATATCAAGT TAGAATGTTG TGGTCCCTGT GGATGACATG ATGACAAATT ATATTATTGG AATGCATTTC ATGTATATTT 

Retrieve as FASTA