Entry information : RaPrx03
Entry ID 1390
Creation 2006-09-15 (Christophe Dunand)
Last sequence changes 2015-12-10 (Achraf Jemmat)
Sequence status partial
Reviewer Christophe Dunand
Last annotation changes 2015-12-15 (Christophe Dunand)
Peroxidase information: RaPrx03
Name RaPrx03
Class Class III peroxidase     [Orthogroup: Prx035]*
Taxonomy Eukaryota Viridiplantae Streptophyta Grossulariaceae Ribes
Organism Ribes americanum    [TaxId: 3802 ]
Cellular localisation N/D
Tissue types Flower buds
Flowers
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value RaPrx03
start..stop
S start..stop
AlyPrx09 384 3e-136 3..209 51..257
CrubPrx52 384 5e-136 3..209 51..257
09 382 1e-135 3..209 51..257
BstrPrx25 382 2e-135 3..209 71..277
Literature and cross-references RaPrx03
Literature dePamphilis,C. et al., unpublished (2004)
EST ref. GenBank:   DT581398.1 [Fragment]
Protein sequence: RaPrx03
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   212
PWM (Da):   %s   22526.23  
PI (pH):   %s   6.74
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GGQFSCPQAN DIVMSVLENA IAREPRMAAS LLRLHFHDCF VQGCDASVLL DDSATIASEK RAGPNKNSIR GFEVIDEIKA KLEEACPQTV SCADILALAA RGSTVMSGGP SWELPLGRKD 
SKTASLNGAN NNIPAPNSTI QNLKSTFKRQ GLDEVDLVAL SGGHTIGVAR CVTFKQRLYN QNGNNLPDST LERGYYYGLK SVCPPSGGDQ QH 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST.
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
AGGAGGGCAG TTCTCTTGCC CTCAAGCTAA TGACATTGTC ATGTCTGTTT TAGAGAATGC CATTGCTAGA GAGCCAAGGA TGGCTGCTTC TTTGCTTAGG CTTCACTTCC ATGATTGCTT  TGTTCAGGGT TGTGATGCAT CGGTTTTGTT GGACGATAGT GCAACAATAG CCAGTGAGAA GAGGGCAGGA CCTAACAAGA ACTCCATTAG AGGCTTTGAA GTGATCGATG AGATTAAAGC  CAAGCTAGAA GAAGCATGTC CTCAAACAGT CTCTTGTGCA GACATACTAG CCCTCGCCGC AAGAGGCTCC ACTGTAATGA GTGGAGGACC AAGTTGGGAG CTCCCATTGG GAAGGAAAGA  TTCAAAGACA GCTAGTCTCA ATGGTGCAAA CAACAACATT CCTGCACCAA ACTCTACCAT CCAAAACCTC AAATCAACAT TCAAGCGCCA AGGACTTGAT GAAGTCGACC TTGTTGCTCT  CTCAGGAGGG CATACAATAG GGGTGGCAAG GTGTGTGACA TTCAAGCAAA GACTATACAA CCAAAATGGA AACAACCTAC CAGATTCAAC CCTAGAGAGA GGCTACTACT ATGGTCTGAA 
ATCAGTGTGT CCCCCATCAG GCGGTGACCA ACAACAT 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GGAGGGCAGT TCTCTTGCCC TCAAGCTAAT GACATTGTCA TGTCTGTTTT AGAGAATGCC ATTGCTAGAG AGCCAAGGAT GGCTGCTTCT TTGCTTAGGC TTCACTTCCA TGATTGCTTT  GTTCAGGGTT GTGATGCATC GGTTTTGTTG GACGATAGTG CAACAATAGC CAGTGAGAAG AGGGCAGGAC CTAACAAGAA CTCCATTAGA GGCTTTGAAG TGATCGATGA GATTAAAGCC  AAGCTAGAAG AAGCATGTCC TCAAACAGTC TCTTGTGCAG ACATACTAGC CCTCGCCGCA AGAGGCTCCA CTGTAATGAG TGGAGGACCA AGTTGGGAGC TCCCATTGGG AAGGAAAGAT  TCAAAGACAG CTAGTCTCAA TGGTGCAAAC AACAACATTC CTGCACCAAA CTCTACCATC CAAAACCTCA AATCAACATT CAAGCGCCAA GGACTTGATG AAGTCGACCT TGTTGCTCTC  TCAGGAGGGC ATACAATAGG GGTGGCAAGG TGTGTGACAT TCAAGCAAAG ACTATACAAC CAAAATGGAA ACAACCTACC AGATTCAACC CTAGAGAGAG GCTACTACTA TGGTCTGAAA 
TCAGTGTGTC CCCCATCAGG CGGTGACCAA CAACAT 

Retrieve as FASTA