Entry information : RaPrx06
Entry ID 1393
Creation 2006-09-15 (Christophe Dunand)
Last sequence changes 2015-12-16 (Christophe Dunand)
Sequence status partial
Reviewer Achraf Jemmat
Last annotation changes 2015-12-20 (Achraf Jemmat)
Peroxidase information: RaPrx06
Name RaPrx06
Class Class III peroxidase     [Orthogroup: Prx035]*
Taxonomy Eukaryota Viridiplantae Streptophyta Grossulariaceae Ribes
Organism Ribes americanum    [TaxId: 3802 ]
Cellular localisation N/D
Tissue types Buds
Flower buds
Flowers
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value RaPrx06
start..stop
S start..stop
TsPrx09 331 1e-115 1..192 161..352
BrPrx09-1Aa_other 328 3e-114 1..192 156..347
EgrPrx192 323 2e-112 1..192 155..346
EcamPrx192 323 2e-112 1..192 155..346
Literature and cross-references RaPrx06
Literature dePamphilis,C. et al., unpublished.
EST ref. GenBank:   DT597819.1 [3' end]
Protein sequence: RaPrx06
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   192
PWM (Da):   %s   20771.4  
PI (pH):   %s   8.46
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
SGGPSWELPL GRKDSKTASL NGANNNIPAP NSTIQNLKST FKRQGLDEVD LVALSGGHTI GVARCVTFKQ RLYNQNGNNL PDSTLERGYY YGLKSVCPPS GGDNNITPLD IASPAKFDNT 
YFKLIMWGKG LLTSDEVLLT GNDGNTMQLV QNFADDESIF FKQFANSMVK MGNISPLTGF NGEVRKNCRL VN 

Retrieve as FASTA  
Remarks Partial sequence from EST. Stop codon at the beginning.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
AGTGGAGGAC CAAGTTGGGA GCTCCCATTG GGAAGGAAAG ATTCAAAGAC AGCTAGTCTC AATGGTGCAA ACAACAACAT TCCTGCACCA AACTCTACCA TCCAAAACCT CAAATCAACA  TTCAAGCGCC AAGGACTTGA TGAAGTCGAC CTTGTTGCTC TCTCAGGAGG GCATACAATA GGGGTGGCAA GGTGTGTGAC ATTCAAGCAA AGACTATACA ACCAAAATGG AAACAACCTA  CCAGATTCAA CCCTAGAGAG AGGCTACTAC TATGGTCTGA AATCAGTGTG TCCCCCATCA GGCGGTGACA ACAACATCAC CCCATTGGAT ATTGCTTCAC CAGCCAAATT CGACAACACC  TACTTCAAGC TCATAATGTG GGGTAAAGGT CTTTTGACAT CAGATGAAGT GCTTCTAACT GGAAATGATG GCAACACAAT GCAATTGGTT CAGAACTTTG CTGATGATGA GAGTATTTTT 
TTCAAACAGT TTGCTAATTC AATGGTGAAG ATGGGGAATA TTAGTCCTTT AACAGGTTTT AATGGCGAGG TTAGGAAGAA TTGTCGCCTC GTTAAC 

Retrieve as FASTA