Entry information : VcPrx01
Entry ID 1394
Creation 2005-06-14 (Christophe Dunand)
Last sequence changes 2015-12-15 (Achraf Jemmat)
Sequence status partial
Reviewer Christophe Dunand
Last annotation changes 2015-12-16 (Christophe Dunand)
Peroxidase information: VcPrx01
Name VcPrx01
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Ericaceae Vaccinium
Organism Vaccinium corymbosum    [TaxId: 69266 ]
Cellular localisation N/D
Tissue type Flower buds
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value VcPrx01
start..stop
S start..stop
NnPrx26 122 6e-35 26..100 156..231
RaPrx02 117 4e-34 26..101 148..224
RcPrx46 117 1e-33 31..101 84..155
BvPrx25 117 6e-33 26..116 146..236
Literature and cross-references VcPrx01
Literature dePamphilis,C. et al., unpublished
EST ref. GenBank:   DR067709.1 [Fragment]
Protein sequence: VcPrx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   128 (105)
PWM (Da):   %s   13524.95 (11235.7)  
PI (pH):   %s   8.95 (8.81) Peptide Signal:   %s   cut: 24 range:24-128
Sequence 0
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GTAGGSSPAL ILPLLLHVKL FTCQVGLNTT FPLGRRDGLN FATREATLAN LPGPDSNTSF LLTSLATKNF DATDVVALSG GHTIGRGHCT SFTDRLYPQD PNHGPNLCRG PQRNLPNIRI 
HKDHHAGY 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST. 5' and 3'are missing
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GGCACTGCGG GAGGGTCGTC TCCTGCGCTG ATATTACCGC TCTTGCTGCA CGTGAAGCTG TTCACCTGTC AGGTGGGCCT GAATACAACG TTCCCGTTGG GAAGAAGGGA TGGACTCAAC  TTTGCAACAA GGGAAGCAAC CCTAGCCAAC CTCCCCGGAC CGGACTCCAA CACCAGTTTC CTCCTCACCT CTCTCGCCAC CAAGAACTTC GATGCCACTG ATGTGGTGGC CCTCTCTGGC  GGCCATACCA TTGGACGTGG CCACTGCACT TCCTTCACCG ACAGGCTCTA CCCTCAGGAC CCCAACCATG GACCCAACCT TTGCCGAGGA CCTCAAAGAA ATCTGCCCAA CATCAGAATC 
CACAAAGACC ACCATGCAGG ATAT 

Retrieve as FASTA