Entry information : CbraGrxC03 (g50339/CHBRA70g00580)
Entry ID 13954
Creation 2016-10-19 (Christophe Dunand)
Last sequence changes 2016-10-19 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2016-10-20 (Christophe Dunand)
Peroxidase information: CbraGrxC03 (g50339/CHBRA70g00580)
Name (synonym) CbraGrxC03 (g50339/CHBRA70g00580)
Class CGYC Grx    [Orthogroup: GrxC004]
Taxonomy Eukaryota Viridiplantae Streptophyta Charophyceae Characeae Chara
Organism Chara braunii    [TaxId: 69332 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CbraGrxC03
start..stop
S start..stop
MpalGrxC05 146 3e-43 168..276 121..229
MpalGrxC04 140 8e-43 177..278 1..102
MpGrxC04 137 2e-41 177..278 1..102
KflGrxC02 119 7e-34 150..277 16..131
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 2739844..2740680 837  
join(2739844..2740680)


exon

Literature and cross-references CbraGrxC03 (g50339/CHBRA70g00580)
Protein sequence: CbraGrxC03 (g50339/CHBRA70g00580)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   279
PWM (Da):   %s   28374.91  
PI (pH):   %s   8.36
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MASVGNAMGA AACRAAVSRA TVLSSSSSCA PSAARSASGS VLLGTGDVAC CLAQVAGDGS ASRARSAAGA TSGCAHATWL ARRQHVQTFP PPVVSGVVRG RHENCRGGWI AEERGESVAG  GGEGRGGFSV RGGTTAGRLR GGVHRDCAMR AGIRCRSSSS GASGGGKEDT TTRLMGLIAE KNAQNPVVVY SKTWCPYCAA VKGLFTKLGV EFKLVELDEL VGEEDWQYAL SQLTGQRTVP 
SVFVGGEHIG GCDSTMELHE SGQLMDRLRE AGASIASA* 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron)
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGAGCG TCGGAAATGC CATGGGGGCC GCGGCATGCC GCGCGGCAGT ATCGAGGGCG ACGGTTTTGT CGTCGTCGTC GTCCTGCGCG CCAAGCGCCG CACGATCGGC ATCAGGATCG  GTGCTGCTGG GCACCGGCGA CGTAGCGTGC TGCTTGGCAC AGGTTGCTGG CGATGGCTCA GCATCCCGCG CAAGGTCAGC CGCGGGGGCG ACCAGCGGCT GTGCTCATGC CACGTGGCTA  GCGCGGCGGC AGCACGTGCA GACATTCCCG CCGCCTGTCG TGAGTGGCGT GGTGCGCGGC CGTCATGAGA ACTGCCGTGG CGGATGGATC GCCGAAGAAC GAGGGGAAAG CGTGGCAGGA  GGAGGAGAGG GACGTGGAGG CTTCAGCGTC AGAGGGGGGA CCACCGCAGG TCGGCTTCGA GGGGGTGTGC ACCGAGATTG CGCGATGAGG GCGGGGATTA GATGCCGCAG CAGCAGCAGC  GGTGCCAGCG GAGGGGGCAA GGAGGATACG ACGACGAGAC TGATGGGCTT GATCGCAGAA AAGAATGCAC AGAATCCTGT TGTCGTCTAC TCTAAAACCT GGTGCCCTTA CTGCGCTGCA  GTCAAGGGGC TGTTTACGAA GCTAGGGGTG GAGTTCAAGC TGGTAGAACT GGATGAGTTG GTGGGCGAAG AGGATTGGCA ATACGCGCTG AGTCAGCTCA CTGGGCAGAG GACTGTGCCA 
AGTGTCTTCG TGGGGGGTGA ACACATTGGA GGGTGTGACA GCACGATGGA GCTGCATGAA AGTGGACAAT TAATGGACCG GCTCCGCGAG GCCGGGGCAT CGATCGCTTC CGCTTAG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGAGCG TCGGAAATGC CATGGGGGCC GCGGCATGCC GCGCGGCAGT ATCGAGGGCG ACGGTTTTGT CGTCGTCGTC GTCCTGCGCG CCAAGCGCCG CACGATCGGC ATCAGGATCG  GTGCTGCTGG GCACCGGCGA CGTAGCGTGC TGCTTGGCAC AGGTTGCTGG CGATGGCTCA GCATCCCGCG CAAGGTCAGC CGCGGGGGCG ACCAGCGGCT GTGCTCATGC CACGTGGCTA  GCGCGGCGGC AGCACGTGCA GACATTCCCG CCGCCTGTCG TGAGTGGCGT GGTGCGCGGC CGTCATGAGA ACTGCCGTGG CGGATGGATC GCCGAAGAAC GAGGGGAAAG CGTGGCAGGA  GGAGGAGAGG GACGTGGAGG CTTCAGCGTC AGAGGGGGGA CCACCGCAGG TCGGCTTCGA GGGGGTGTGC ACCGAGATTG CGCGATGAGG GCGGGGATTA GATGCCGCAG CAGCAGCAGC  GGTGCCAGCG GAGGGGGCAA GGAGGATACG ACGACGAGAC TGATGGGCTT GATCGCAGAA AAGAATGCAC AGAATCCTGT TGTCGTCTAC TCTAAAACCT GGTGCCCTTA CTGCGCTGCA  GTCAAGGGGC TGTTTACGAA GCTAGGGGTG GAGTTCAAGC TGGTAGAACT GGATGAGTTG GTGGGCGAAG AGGATTGGCA ATACGCGCTG AGTCAGCTCA CTGGGCAGAG GACTGTGCCA 
AGTGTCTTCG TGGGGGGTGA ACACATTGGA GGGTGTGACA GCACGATGGA GCTGCATGAA AGTGGACAAT TAATGGACCG GCTCCGCGAG GCCGGGGCAT CGATCGCTTC CGCTTAG 

Retrieve as FASTA