View Redoxidase 14052

Entry information : AtPNC01 (AT2G02850/AtPNC/ARPN)

Entry ID	14052
Creation	2016-10-26 (Christophe Dunand)
Last sequence changes	2016-10-26 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2016-10-26 (Christophe Dunand)

Peroxidase information: AtPNC01 (AT2G02850/AtPNC/ARPN)

Name (synonym)

AtPNC01 (AT2G02850/AtPNC/ARPN)

Class

Plantacyanin [Orthogroup: PNC001]

Taxonomy

Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis

Organism

Arabidopsis thaliana [TaxId: 3702 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	AtPNC01 start..stop	S start..stop
ThasPNC01	174	6.59e-58	1..128	1..128
HaPNC16	137	2.68e-43	1..128	1..125
HaPNC11	135	2.2e-42	1..128	1..125
HaPNC01	132	1.77e-41	1..128	1..125

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '14052' 'join(275..464,1166..1365)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	275..464	188	N° 2	1166..1365	198
join(275..464,1166..1365)

Literature and cross-references AtPNC01 (AT2G02850/AtPNC/ARPN)

Cluster/Prediction ref.	Genebank: 814816
Omic ref.	AtProteome: At2g02850 ATTED-II: At2g02850 e-FP Browser: At2g02850 ePlant: At2g02850 TAIR: At2g02850

Protein sequence: AtPNC01 (AT2G02850/AtPNC/ARPN)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	129 (96)
PWM (Da):	13929.95 (10485.1)
PI (pH):	9.94 (9.56)	Peptide Signal:	cut: 34 range:34-129

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MAKGRGSASWSARAIVTLMAVSVLLLQADYVQAATYTVGDSGIWT
FNAVGWPKGKHFRAGDVLVFNYNPRMHNVVKVDSGSYNNCKTPTGAKPYTSGKDRITLSKGQNFFICNFPNHCESDMKIAVTAV

Retrieve as FASTA

Remarks

Complete sequence from genomic (1 intron)

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCCAAGGGAAGAGGCAGTGCATCATGGTCGGCTCGAGCCATAGTGACTCTCATGGCTGTGTCAGTGTTGTTGCTTCAAGCTGACTACGTTCAAGCTGCAACGTACACGGTCGGTGAC
TCTGGTATCTGGACCTTTAACGCTGTGGGTTGGCCTAAAGGCAAACACTTTAGAGCCGGCGACGTTCTTGTGGTATATACTTCACATCCTTTTAATCAAGCTTCAGTAATTATTATACTA
TCTTGTTACACTTAAACCACAAGCAGTTAAGCTTTCTAATCTTCATATCCACTAGGGATGTATCCATATCATGGCTGCTTCTAAGTATGGGCAAGATGTGCTTTTGTATAAAGCACACGA
CAAATAAAAAACTTCCTATAGTTTAAAGGTTACAAATATGATTGATAAATGTTTTGCATACACAGTTTAAATAGTGTATATCTTTTACATGATTGAGCCTGTGATATATTTTACTATATT
ATAGATATGTATGTATACATCTTCCTTCTCCAAAATTTTTTTTCTAGTTTCGATTATTCACAAACGCTGATTTATGTGTATAGCAAAAATTCATGTGCGTTTAAATTTAACAAAAAATAT
TTTAAAATATCATAAATAGTACCACTAACCTAATTTTTAATTTATTTTGGTATACTTGAGTGATGAATTAAAATTGTTTTCGCATGAAGAAATATCTCAACCAACGTTATAGTATGTAGA
TTTATGAAATTCCTAAACAGTTCCAGCTACTTTATAATCTGAGTGTCAATATATGGAATCAATTAAGAGTGGTCGAGTAATCAATTATATGATTAACTAATTTAACGTTAGACCAAAAAA
AAAAAATTATATGATTAACTTAAAATTTTATATTTTCCAAAACTTTGGTGCAGTGTTTAACTATAATCCGAGGATGCACAACGTAGTGAAGGTAGATAGCGGAAGTTACAACAACTGCAA
AACACCGACAGGGGCAAAACCTTACACTTCAGGCAAAGATCGTATAACTTTGTCTAAAGGACAAAACTTTTTCATCTGCAATTTTCCAAACCATTGCGAAAGCGATATGAAAATCGCAGT
CACCGCGGTTTGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA