Entry information : CbraLilium01 (g30326/CHBRA35g00400)
Entry ID 14174
Creation 2016-10-27 (Christophe Dunand)
Last sequence changes 2016-11-09 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2016-11-09 (Christophe Dunand)
Peroxidase information: CbraLilium01 (g30326/CHBRA35g00400)
Name (synonym) CbraLilium01 (g30326/CHBRA35g00400)
Class Thioredoxin Type Lilium    [Orthogroup: Lilium001]
Taxonomy Eukaryota Viridiplantae Streptophyta Charophyceae Characeae Chara
Organism Chara braunii    [TaxId: 69332 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CbraLilium01
start..stop
S start..stop
PpaLilium02 229 2e-74 97..254 67..220
PpaLilium01 229 2e-74 97..254 67..220
HaLilium04 214 7e-69 123..262 74..213
KflLilium01 212 1e-67 109..252 85..229
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1956759..1957829 1071  
complement(join(1956759..1957829)


exon

Literature and cross-references CbraLilium01 (g30326/CHBRA35g00400)
Protein sequence: CbraLilium01 (g30326/CHBRA35g00400)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   357
PWM (Da):   %s   37207.63  
PI (pH):   %s   8.49
Sequence
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Send to Peroxiscan
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MELAEGILSA TASPSGFSFP GPSDVCASRK SPSCVRAASC IPSAAMTSSS ASSSCLSTEA AALRARTSSH RLLGGSSLWP CEQALWTSDA GAGRRQPARR MKGRQARVRS APVAELAPND  GVRWWERKGG ENVKDIRSAQ EFVDALSAAG ERLVVVDFYA TWCGSCRALY PKVLRLASEY SMVDFLKVNF DENKPLCKSL NVKVLPFFHF YRGASGRLDA FSASITKFQK LKDAVEQHNT 
ERCSLGPPLG VGDIPLPGVS RPTAEPDSSA IPPLSPATPV GSSASPSPSV LPSSLSTSSF SDASSDFPLN TGVSPSSFPS SVPSSVPSSV PSSxPPPxAD NPDSIPPRLP AFLNQK* 

Retrieve as FASTA  
Remarks
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAGCTAG CCGAGGGCAT TCTTTCTGCC ACTGCATCTC CGAGTGGCTT TTCGTTCCCT GGCCCTTCTG ACGTCTGTGC GTCACGCAAG TCTCCTTCTT GTGTAAGAGC TGCATCTTGC  ATACCGTCGG CCGCGATGAC TTCTTCTTCT GCTTCTTCAT CCTGCCTGTC AACGGAGGCA GCAGCGCTGA GGGCACGGAC AAGCAGTCAT CGACTCCTCG GAGGAAGCAG CCTGTGGCCT  TGCGAGCAAG CTCTGTGGAC AAGTGATGCA GGGGCAGGCA GACGGCAACC TGCAAGGCGA ATGAAGGGCA GACAAGCGAG GGTAAGATCC GCACCCGTTG CAGAGCTGGC ACCCAACGAT  GGTGTGAGGT GGTGGGAGAG GAAAGGTGGG GAGAATGTCA AAGACATTCG TTCGGCGCAA GAGTTCGTGG ATGCATTGTC GGCTGCCGGC GAACGCCTTG TTGTCGTGGA TTTCTATGCC  ACCTGGTGCG GTTCTTGCAG GGCTCTCTAT CCAAAAGTCC TCCGGCTAGC ATCCGAATAC AGCATGGTAG ATTTTCTGAA AGTTAACTTC GATGAGAACA AACCCCTGTG CAAGAGCCTC  AACGTCAAAG TTCTGCCCTT CTTCCACTTC TATCGCGGTG CATCTGGTCG ATTGGATGCT TTCTCGGCAT CAATCACCAA GTTCCAGAAG CTCAAGGATG CCGTAGAACA ACACAATACG  GAGCGCTGCA GCTTAGGCCC GCCTCTCGGG GTGGGGGACA TACCGCTCCC AGGCGTGAGC AGGCCAACAG CGGAGCCTGA CTCCTCCGCT ATCCCCCCTT TATCGCCTGC CACCCCTGTA  GGGTCCTCTG CATCTCCTTC ACCCTCGGTA CTACCCTCCT CTCTGTCCAC GAGTTCCTTC TCTGATGCCT CCTCAGATTT CCCCCTCAAC ACTGGAGTTA GCCCCTCTTC ATTTCCCTCC 
TCTGTTCCCT CCTCTGTTCC CTCCTCTGTT CCCTCCTCAT YCCCCCCCCC CSCCGCTGAC AATCCTGACT CGATACCCCC CCGTTTGCCT GCATTCCTGA ACCAGAAATG A 

Retrieve as FASTA  
CDS
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAGCTAG CCGAGGGCAT TCTTTCTGCC ACTGCATCTC CGAGTGGCTT TTCGTTCCCT GGCCCTTCTG ACGTCTGTGC GTCACGCAAG TCTCCTTCTT GTGTAAGAGC TGCATCTTGC  ATACCGTCGG CCGCGATGAC TTCTTCTTCT GCTTCTTCAT CCTGCCTGTC AACGGAGGCA GCAGCGCTGA GGGCACGGAC AAGCAGTCAT CGACTCCTCG GAGGAAGCAG CCTGTGGCCT  TGCGAGCAAG CTCTGTGGAC AAGTGATGCA GGGGCAGGCA GACGGCAACC TGCAAGGCGA ATGAAGGGCA GACAAGCGAG GGTAAGATCC GCACCCGTTG CAGAGCTGGC ACCCAACGAT  GGTGTGAGGT GGTGGGAGAG GAAAGGTGGG GAGAATGTCA AAGACATTCG TTCGGCGCAA GAGTTCGTGG ATGCATTGTC GGCTGCCGGC GAACGCCTTG TTGTCGTGGA TTTCTATGCC  ACCTGGTGCG GTTCTTGCAG GGCTCTCTAT CCAAAAGTCC TCCGGCTAGC ATCCGAATAC AGCATGGTAG ATTTTCTGAA AGTTAACTTC GATGAGAACA AACCCCTGTG CAAGAGCCTC  AACGTCAAAG TTCTGCCCTT CTTCCACTTC TATCGCGGTG CATCTGGTCG ATTGGATGCT TTCTCGGCAT CAATCACCAA GTTCCAGAAG CTCAAGGATG CCGTAGAACA ACACAATACG  GAGCGCTGCA GCTTAGGCCC GCCTCTCGGG GTGGGGGACA TACCGCTCCC AGGCGTGAGC AGGCCAACAG CGGAGCCTGA CTCCTCCGCT ATCCCCCCTT TATCGCCTGC CACCCCTGTA  GGGTCCTCTG CATCTCCTTC ACCCTCGGTA CTACCCTCCT CTCTGTCCAC GAGTTCCTTC TCTGATGCCT CCTCAGATTT CCCCCTCAAC ACTGGAGTTA GCCCCTCTTC ATTTCCCTCC 
TCTGTTCCCT CCTCTGTTCC CTCCTCTGTT CCCTCCTCAT YCCCCCCCCC CSCCGCTGAC AATCCTGACT CGATACCCCC CCGTTTGCCT GCATTCCTGA ACCAGAAATG A 

Retrieve as FASTA