Entry information : PpaTrxM05 (Pp3c6_10090)
Entry ID 14197
Creation 2016-10-27 (Christophe Dunand)
Last sequence changes 2016-11-08 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2016-11-08 (Christophe Dunand)
Peroxidase information: PpaTrxM05 (Pp3c6_10090)
Name (synonym) PpaTrxM05 (Pp3c6_10090)
Class Thioredoxin Type M    [Orthogroup: TrxM002]
Taxonomy Eukaryota Viridiplantae Streptophyta Funariaceae Physcomitrella
Organism Physcomitrella patens    [TaxId: 3218 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PpaTrxM05
start..stop
S start..stop
PpaTrxM02 240 5e-82 33..191 30..188
PpaTrxM01 237 8e-81 34..191 33..190
PpaTrxM04 236 1e-80 33..190 33..190
PpaTrxM03 232 1e-78 33..191 31..189
Literature and cross-references PpaTrxM05 (Pp3c6_10090)
Protein sequence: PpaTrxM05 (Pp3c6_10090)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   193
PWM (Da):   %s   21064.03  
PI (pH):   %s   10.42
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAMTVDARVS RTRPVARSAP VVRSWTVSNC SSPCLVSVKL RALLVFRGLR IESTRTTLTS HSSSRGSARS QRKGIVCEAQ KTVTGVARAV TEATWTELVL NCDTPVLVDF WAPWCGPCRM 
IAPMIDEIAK QYAGKVRCLK LNTDESPDIA TKYGIRSIPT VLVFTRGEKR DSVVGAVPKS TLTSTIDKYI SW* 

Retrieve as FASTA  
Remarks 1 intron
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCGATGA CGGTGGATGC ACGAGTGTCC AGGACGAGGC CTGTGGCTAG AAGTGCACCC GTTGTGCGGT CGTGGACGGT TTCGAACTGC AGCTCGCCTT GCCTGGTGAG TGTGAAACTG  CGTGCTCTGC TGGTGTTTCG AGGCCTCAGG ATTGAGTCGA CCAGGACGAC CCTCACATCT CATTCTTCAT CTCGAGGCTC CGCTCGTTCG CAAAGGAAAG GAATTGTGTG CGAAGCTCAG  AAAACGGTAA CTGGAGGTAT ATTTCCATTG CTCTTCATGG TTTTCGAGTG ACACGATCAC TAGATTTAGA GGGGCAAGTT CGTTCGTGCA TTGCCAAAGA CTGAATCTGC AATTCTAGTG  CGTGCTTCTT TTGGTGTTTT GATCTAACCT CTCGGAAAAG AGTATTATGT TTTGGGTTGA CCCAATCCAG TGCTTCGATA CGAAATTGAG TGTAACCGAC GATGCCGAGC CTGAGATCCT  GGTTTCGTGC CAATGGTGCT CCAATCTGTG GAGCAGTTTC CCATGTCGAC GAATTGCATT GACACCGTTC AGGATGAATA CTAATACCAT TCCAAGAGCT GGTTCGCAGT TCATAAGGAT  TCATGCGTAG TCATATTCAA CTCACAGAAC GAGTCGTCCA TCTACCCCAG AGGACAGTCA CCTCACCGCA CACCATGCAT TGTGGCTTCT CCTGCTTGCT AACCATGCTG TGGGTGTCGC  TTGATCACAA CATAGTGACA CCATTCACAG TAACAGTCTG CGAGGTCGAT GAATCTCAAA GCGGACGAAC TCATGACCAC TGGGCCTGTT GCATCGATGT TTCTGCAGTG GCTAGAGCCG  TGACCGAAGC GACGTGGACA GAGCTAGTGT TGAATTGCGA CACCCCAGTG TTGGTGGATT TCTGGGCCCC GTGGTGCGGG CCGTGCCGCA TGATTGCTCC TATGATTGAC GAGATAGCAA  AGCAGTATGC GGGCAAAGTG CGGTGCCTGA AGCTGAACAC GGACGAGAGC CCGGACATTG CAACCAAGTA CGGGATTCGA TCCATTCCGA CGGTGTTGGT GTTCACGAGG GGAGAGAAGA 
GGGACAGCGT GGTCGGGGCG GTGCCCAAGA GCACGCTCAC CAGCACCATC GACAAGTATA TCTCATGGTA G 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCGATGA CGGTGGATGC ACGAGTGTCC AGGACGAGGC CTGTGGCTAG AAGTGCACCC GTTGTGCGGT CGTGGACGGT TTCGAACTGC AGCTCGCCTT GCCTGGTGAG TGTGAAACTG  CGTGCTCTGC TGGTGTTTCG AGGCCTCAGG ATTGAGTCGA CCAGGACGAC CCTCACATCT CATTCTTCAT CTCGAGGCTC CGCTCGTTCG CAAAGGAAAG GAATTGTGTG CGAAGCTCAG  AAAACGGTAA CTGGAGTGGC TAGAGCCGTG ACCGAAGCGA CGTGGACAGA GCTAGTGTTG AATTGCGACA CCCCAGTGTT GGTGGATTTC TGGGCCCCGT GGTGCGGGCC GTGCCGCATG  ATTGCTCCTA TGATTGACGA GATAGCAAAG CAGTATGCGG GCAAAGTGCG GTGCCTGAAG CTGAACACGG ACGAGAGCCC GGACATTGCA ACCAAGTACG GGATTCGATC CATTCCGACG 
GTGTTGGTGT TCACGAGGGG AGAGAAGAGG GACAGCGTGG TCGGGGCGGT GCCCAAGAGC ACGCTCACCA GCACCATCGA CAAGTATATC TCATGGTAG 

Retrieve as FASTA