Entry information : PpaTrxF04 (Pp3c4_3890)
Entry ID 14203
Creation 2016-10-27 (Christophe Dunand)
Last sequence changes 2016-11-08 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2016-11-08 (Christophe Dunand)
Peroxidase information: PpaTrxF04 (Pp3c4_3890)
Name (synonym) PpaTrxF04 (Pp3c4_3890)
Class Thioredoxin Type F    [Orthogroup: TrxF001]
Taxonomy Eukaryota Viridiplantae Streptophyta Funariaceae Physcomitrella
Organism Physcomitrella patens    [TaxId: 3218 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PpaTrxF04
start..stop
S start..stop
AtTrxF01 167 1e-53 1..190 1..173
ThasTrxF01 166 8e-53 65..190 57..178
ThasTrxF02 164 2e-52 66..190 57..177
AtTrxF02 164 6e-52 65..190 62..183
Literature and cross-references PpaTrxF04 (Pp3c4_3890)
Protein sequence: PpaTrxF04 (Pp3c4_3890)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   194
PWM (Da):   %s   20712.82  
PI (pH):   %s   8.47
Sequence
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Send to Peroxiscan
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MALALQLSAT SAGSHTLTTR CVGAVHSASK IGYGSVAVND RTCGGVLRHQ VDQLWHVKEA ALVRAASVVR RSAESPSGSV EVAVGGITEV GNDTFYPFLK DAGEKVVVLD MYTQWCGPCK 
LMLPKVLKLS ESYTDVLFAK LDCNQENKPL AKELGVKTVP TFKIFKNAEV VGEVRGAKYD ELVKAIESAR LLS* 

Retrieve as FASTA  
Remarks No intron
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCGCTGG CCTTGCAATT GAGCGCCACC AGTGCTGGTA GCCACACACT TACGACGAGA TGCGTTGGAG CAGTGCATAG TGCAAGTAAA ATTGGCTATG GGAGCGTTGC GGTCAACGAT  CGGACCTGTG GAGGAGTTTT GCGGCATCAG GTGGACCAGC TATGGCATGT GAAGGAGGCT GCCTTGGTTA GGGCTGCAAG CGTCGTGCGC AGAAGTGCGG AGTCGCCCTC CGGCAGTGTG  GAAGTGGCTG TTGGTGGGAT AACCGAGGTC GGCAACGACA CGTTCTATCC GTTTTTGAAA GATGCAGGGG AGAAAGTGGT GGTTCTAGAC ATGTACACCC AATGGTGCGG CCCGTGCAAG  CTCATGTTGC CCAAGGTGCT GAAGCTGTCG GAATCTTACA CCGACGTGCT GTTTGCAAAG CTGGATTGCA ATCAGGAGAA CAAGCCTCTT GCGAAGGAGT TGGGTGTGAA AACCGTGCCC 
ACATTCAAGA TCTTCAAGAA CGCGGAGGTC GTCGGCGAAG TCCGGGGAGC GAAGTACGAC GAGCTTGTCA AGGCGATCGA GAGCGCTCGA TTGCTCTCGT GA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCGCTGG CCTTGCAATT GAGCGCCACC AGTGCTGGTA GCCACACACT TACGACGAGA TGCGTTGGAG CAGTGCATAG TGCAAGTAAA ATTGGCTATG GGAGCGTTGC GGTCAACGAT  CGGACCTGTG GAGGAGTTTT GCGGCATCAG GTGGACCAGC TATGGCATGT GAAGGAGGCT GCCTTGGTTA GGGCTGCAAG CGTCGTGCGC AGAAGTGCGG AGTCGCCCTC CGGCAGTGTG  GAAGTGGCTG TTGGTGGGAT AACCGAGGTC GGCAACGACA CGTTCTATCC GTTTTTGAAA GATGCAGGGG AGAAAGTGGT GGTTCTAGAC ATGTACACCC AATGGTGCGG CCCGTGCAAG  CTCATGTTGC CCAAGGTGCT GAAGCTGTCG GAATCTTACA CCGACGTGCT GTTTGCAAAG CTGGATTGCA ATCAGGAGAA CAAGCCTCTT GCGAAGGAGT TGGGTGTGAA AACCGTGCCC 
ACATTCAAGA TCTTCAAGAA CGCGGAGGTC GTCGGCGAAG TCCGGGGAGC GAAGTACGAC GAGCTTGTCA AGGCGATCGA GAGCGCTCGA TTGCTCTCGT GA 

Retrieve as FASTA