Entry information : CbraTrx04 (g30695/CHBRA367g00210/HCF164-like)
Entry ID 14204
Creation 2016-10-27 (Christophe Dunand)
Last sequence changes 2016-11-04 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2016-11-04 (Christophe Dunand)
Peroxidase information: CbraTrx04 (g30695/CHBRA367g00210/HCF164-like)
Name (synonym) CbraTrx04 (g30695/CHBRA367g00210/HCF164-like)
Class Other Thioredoxin    [Orthogroup: Trx005]
Taxonomy Eukaryota Viridiplantae Streptophyta Charophyceae Characeae Chara
Organism Chara braunii    [TaxId: 69332 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CbraTrx04
start..stop
S start..stop
KflTrx03 214 3e-68 208..390 47..229
HaTrx06 207 3e-65 207..390 66..251
PpaTrx01 207 5e-64 219..389 193..360
AtTrx06 200 2e-62 219..390 95..261
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 833533..834714 1182  
join(833533..834714)


exon

Literature and cross-references CbraTrx04 (g30695/CHBRA367g00210/HCF164-like)
Protein sequence: CbraTrx04 (g30695/CHBRA367g00210/HCF164-like)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   394
PWM (Da):   %s   42377.77  
PI (pH):   %s   5.87
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAASCQFAKE VCVKTLNSSM LHASGTNRQC PEQLGSIRQS KIVSRQHGAQ GERVQCRDAN ITDVAQRKHL PHGPHGPHGQ RRLMIQFSGS MRKSSVTRER RSRVGARPPL EKNGRSSWVA  GRALKEDDAV AEVFRVGEEN QEIKSGCATT TTTTTTECGR QSEADGDGAD GPGRVVSASD GQSEREEKEV VGEVVGYPLP KQFNVDDDSS SPMATQGSNR TIALISAGLS AGLFMATRLA  GAGPDLSTLE KSSLPFEYAM SNGRPTMVEF YADWCEVCRT MAKDVFAIEE KYKDDVNFVM LNIDNVKWAE EVDEFGVEGI PHFAFLDGNG DEEGVVVGKL PRNILEENVM ALASRASSIP 
HSQVIGPVSD ISNKPTSSRS TGSVSPLSHG SPF* 

Retrieve as FASTA  
Remarks
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGGCAT CATGTCAATT CGCAAAAGAG GTGTGTGTGA AGACTCTCAA CTCCTCCATG CTCCATGCAT CCGGTACCAA CCGGCAGTGC CCCGAGCAGC TGGGAAGCAT CCGGCAAAGC  AAGATCGTGT CTCGACAGCA TGGAGCTCAG GGAGAGAGAG TGCAGTGCCG TGATGCTAAC ATAACCGACG TGGCCCAGAG GAAACACCTC CCTCACGGAC CTCACGGACC TCATGGACAG  AGGAGATTGA TGATTCAATT CTCTGGTAGT ATGCGAAAGA GCTCAGTGAC AAGGGAGAGG AGATCGAGGG TGGGTGCCCG ACCACCACTT GAGAAAAATG GTCGATCGAG TTGGGTAGCA  GGTAGGGCAC TGAAAGAGGA CGATGCAGTC GCTGAGGTCT TTCGCGTAGG AGAGGAGAAT CAGGAGATCA AGTCTGGCTG CGCCACAACG ACAACGACAA CGACTACCGA GTGTGGAAGA  CAATCGGAAG CAGATGGAGA TGGGGCAGAC GGGCCGGGAA GGGTCGTGAG TGCAAGTGAT GGGCAGAGTG AGCGGGAAGA GAAGGAGGTG GTGGGAGAGG TGGTGGGTTA TCCCTTGCCG  AAGCAATTCA ATGTCGATGA TGACTCTTCG TCGCCAATGG CAACTCAAGG CTCGAACCGA ACCATCGCGC TGATATCGGC TGGGCTGTCT GCAGGGTTAT TTATGGCCAC TAGATTGGCA  GGTGCTGGGC CAGATCTGTC GACGCTTGAG AAATCCTCGC TGCCGTTTGA ATACGCTATG TCGAATGGAC GTCCGACTAT GGTAGAATTC TACGCTGACT GGTGTGAGGT GTGTAGGACC  ATGGCCAAAG ATGTGTTTGC AATAGAGGAG AAGTACAAGG ACGATGTCAA TTTCGTGATG CTCAACATAG ATAACGTGAA ATGGGCCGAA GAAGTCGACG AGTTTGGGGT TGAGGGTATC  CCCCATTTTG CGTTTCTCGA TGGGAATGGG GATGAAGAAG GGGTGGTGGT GGGAAAACTT CCTCGGAATA TTCTTGAGGA GAACGTCATG GCCCTGGCTA GCAGAGCATC GTCCATACCC 
CACTCGCAAG TGATTGGTCC TGTTTCTGAC ATTTCAAACA AACCCACCTC AAGCAGATCA ACGGGGAGTG TCTCTCCATT GAGTCATGGA TCACCATTCT AA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGGCAT CATGTCAATT CGCAAAAGAG GTGTGTGTGA AGACTCTCAA CTCCTCCATG CTCCATGCAT CCGGTACCAA CCGGCAGTGC CCCGAGCAGC TGGGAAGCAT CCGGCAAAGC  AAGATCGTGT CTCGACAGCA TGGAGCTCAG GGAGAGAGAG TGCAGTGCCG TGATGCTAAC ATAACCGACG TGGCCCAGAG GAAACACCTC CCTCACGGAC CTCACGGACC TCATGGACAG  AGGAGATTGA TGATTCAATT CTCTGGTAGT ATGCGAAAGA GCTCAGTGAC AAGGGAGAGG AGATCGAGGG TGGGTGCCCG ACCACCACTT GAGAAAAATG GTCGATCGAG TTGGGTAGCA  GGTAGGGCAC TGAAAGAGGA CGATGCAGTC GCTGAGGTCT TTCGCGTAGG AGAGGAGAAT CAGGAGATCA AGTCTGGCTG CGCCACAACG ACAACGACAA CGACTACCGA GTGTGGAAGA  CAATCGGAAG CAGATGGAGA TGGGGCAGAC GGGCCGGGAA GGGTCGTGAG TGCAAGTGAT GGGCAGAGTG AGCGGGAAGA GAAGGAGGTG GTGGGAGAGG TGGTGGGTTA TCCCTTGCCG  AAGCAATTCA ATGTCGATGA TGACTCTTCG TCGCCAATGG CAACTCAAGG CTCGAACCGA ACCATCGCGC TGATATCGGC TGGGCTGTCT GCAGGGTTAT TTATGGCCAC TAGATTGGCA  GGTGCTGGGC CAGATCTGTC GACGCTTGAG AAATCCTCGC TGCCGTTTGA ATACGCTATG TCGAATGGAC GTCCGACTAT GGTAGAATTC TACGCTGACT GGTGTGAGGT GTGTAGGACC  ATGGCCAAAG ATGTGTTTGC AATAGAGGAG AAGTACAAGG ACGATGTCAA TTTCGTGATG CTCAACATAG ATAACGTGAA ATGGGCCGAA GAAGTCGACG AGTTTGGGGT TGAGGGTATC  CCCCATTTTG CGTTTCTCGA TGGGAATGGG GATGAAGAAG GGGTGGTGGT GGGAAAACTT CCTCGGAATA TTCTTGAGGA GAACGTCATG GCCCTGGCTA GCAGAGCATC GTCCATACCC 
CACTCGCAAG TGATTGGTCC TGTTTCTGAC ATTTCAAACA AACCCACCTC AAGCAGATCA ACGGGGAGTG TCTCTCCATT GAGTCATGGA TCACCATTCT AA 

Retrieve as FASTA