Entry information : PpaTrxH04 (Pp3c17_13510)
Entry ID 14220
Creation 2016-10-27 (Christophe Dunand)
Last sequence changes 2016-11-08 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2016-11-08 (Christophe Dunand)
Peroxidase information: PpaTrxH04 (Pp3c17_13510)
Name (synonym) PpaTrxH04 (Pp3c17_13510)
Class Thioredoxin Type H    [Orthogroup: TrxH001]
Taxonomy Eukaryota Viridiplantae Streptophyta Funariaceae Physcomitrella
Organism Physcomitrella patens    [TaxId: 3218 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PpaTrxH04
start..stop
S start..stop
PpaTrxH01 149 5e-47 78..186 5..114
PpaTrxH09 148 8e-47 78..186 3..112
PpaTrxH02 144 5e-44 78..187 93..203
PpaTrxH03 134 5e-41 54..188 2..146
Literature and cross-references PpaTrxH04 (Pp3c17_13510)
Protein sequence: PpaTrxH04 (Pp3c17_13510)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   192
PWM (Da):   %s   20655.42  
PI (pH):   %s   8.32
Sequence
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Send to Peroxiscan
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MGNMCFSGNR DRVDRKKTDN PATPSKTETL STAEAPSTTE APSTTEAPST TEAPSTTEAP ATTETPAKPA RPAKSNKHGN VIVIKNAKGL ENKLNEAKAA GKIIVVDFTA TWCSPCRTMS 
PIFAKLSKEY SDMVFLEVDV DKVQDVTAKY EVLAMPTFLF IKDGKQVERL VGANDELGKK CKHYSTTHVS V* 

Retrieve as FASTA  
Remarks
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGCAATA TGTGTTTCAG TGGAAATCGC GATCGTGTTG ACCGGAAAAA AACAGACAAT CCAGGTTTAG GTCTAGCATT CTTTCATCTT TCGAAATTTG ATTGTTTTTT TTTTTTTTTT  TTTTTTTTTT TTTTTTTCTC CTGCAATAGG ACTGTTGCGA TAGATGATGT GATGTGGAAA GGATTTATCA AGCTCTCTTC ATTGAGCGCT AGTACTTTAG GCTGATCAGA AGTGTGCCTA  TGTTGTTTAT AACAATATCC TGTCCTGCAT CTGTGTGAGC CAGAAGACCT TTCTTTTTTG GATGCTAAGC TGGAATTTCG TGGCCCAAAT CGTCACAGGG TTTGGTGTGG CATTGTCTCA  TGCTGTTCGC CGAACTCTGA TAACCTGCGA TTCTCCTTTT TGCAGCAACA CCATCGAAAA CAGAAACACT ATCGACAGCA GAAGCACCAT CGACGACAGA AGCACCATCG ACGACTGAAG  CACCATCGAC AACTGAAGCA CCATCGACAA CTGAAGCACC AGCAACCACA GAAACACCAG CGAAACCAGC GAGACCAGCA AAATCTAATA AGCACGGAAA TGTTATCGTC ATAAAGAACG  CGAAAGGTTT GGAGAATAAG CTGAACGAAG CTAAGGCCGC TGGTAAAATT GTAAGAGCGA TGCCATCTTT TCCTTCTCTC CTTGCGCTAC TTTTTTTTGG TGTCATTTTG CAATTATTTT  TGTATTCTTT GGCGTGCCAG AGTTGTGCTA TTGAGCGAAT GCCGTGGCTT ACAAAATCAT TATCACTTGC TGATAATTCG GTTACCTCAC AGATTGTCGT CGATTTTACT GCTACTTGGT  GCAGCCCATG CCGAACGATG TCTCCCATCT TTGCCAAGTT AAGCAAAGAG TACTCCGACA TGGTTTTCCT CGAGGTTGAT GTCGACAAAG TTCAGGTACC GGCACGATTG CTTGTGACGG  AGATTGCCCG TTGGTGTTAT TGGAAATGAA GCTGCTCCTC ATATGTAATT GATCAACACG TGTTTTATAA TTGATGACCA GTTTAAATAC AGGTTCATAT AGTCTTCTGT TTCCTCTCGT  TTCTTTAAGT TCGTCGTTAT GTTCCAACGG AGTTTTTGTT CTTTGACTTT GCAGGATGTC ACAGCTAAGT ATGAGGTTCT TGCCATGCCA ACTTTCTTGT TTATCAAGGA TGGTAAACAA 
GTTGAGAGGC TTGTTGGGGC TAACGACGAA CTCGGGAAGA AGTGCAAGCA TTACAGTACT ACCCACGTTA GTGTGTGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGCAATA TGTGTTTCAG TGGAAATCGC GATCGTGTTG ACCGGAAAAA AACAGACAAT CCAGCAACAC CATCGAAAAC AGAAACACTA TCGACAGCAG AAGCACCATC GACGACAGAA  GCACCATCGA CGACTGAAGC ACCATCGACA ACTGAAGCAC CATCGACAAC TGAAGCACCA GCAACCACAG AAACACCAGC GAAACCAGCG AGACCAGCAA AATCTAATAA GCACGGAAAT  GTTATCGTCA TAAAGAACGC GAAAGGTTTG GAGAATAAGC TGAACGAAGC TAAGGCCGCT GGTAAAATTA TTGTCGTCGA TTTTACTGCT ACTTGGTGCA GCCCATGCCG AACGATGTCT  CCCATCTTTG CCAAGTTAAG CAAAGAGTAC TCCGACATGG TTTTCCTCGA GGTTGATGTC GACAAAGTTC AGGATGTCAC AGCTAAGTAT GAGGTTCTTG CCATGCCAAC TTTCTTGTTT 
ATCAAGGATG GTAAACAAGT TGAGAGGCTT GTTGGGGCTA ACGACGAACT CGGGAAGAAG TGCAAGCATT ACAGTACTAC CCACGTTAGT GTGTGA 

Retrieve as FASTA