Entry information : PpaClot01 (Pp3c1_3150)
Entry ID 14230
Creation 2016-10-27 (Christophe Dunand)
Last sequence changes 2016-11-08 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2016-11-08 (Christophe Dunand)
Peroxidase information: PpaClot01 (Pp3c1_3150)
Name (synonym) PpaClot01 (Pp3c1_3150)
Class Thioredoxin Type Clot    [Orthogroup: Clot001]
Taxonomy Eukaryota Viridiplantae Streptophyta Funariaceae Physcomitrella
Organism Physcomitrella patens    [TaxId: 3218 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PpaClot01
start..stop
S start..stop
HaClot01 140 3e-44 1..129 1..131
AtClot01 128 2e-39 6..117 6..120
ThasClot01 126 1e-38 7..129 7..131
CbraClot01 104 4e-29 14..127 115..227
Literature and cross-references PpaClot01 (Pp3c1_3150)
Protein sequence: PpaClot01 (Pp3c1_3150)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   138
PWM (Da):   %s   15263.04  
PI (pH):   %s   5.3
Sequence
Send to BLAST
Send to Peroxiscan
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MPAAIVDAGL GDFETILKTA ELQGPGVLLL LFLGDRIASV GKSWCPDCVR AEPIIYKLVN ESESPVTLVR VYVGDKPTWR TSDHPLRCDD RFKLKGVPTL IRWENGAISG RLEDYEADKE 
MKIKELLKSS EVQTKTI* 

Retrieve as FASTA  
Remarks
DNA
Send to BLAST
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TGCCTGCGGC AATTGTGGAT GCGGGACTTG GTGACTTCGA GACAATTTTG AAGGTGGGTA CCCGCGCCAT ATATGCCCCT GGCGCCGTAG TCTTCGAACT CGAGTTTCTG CTCTTGGGAT  TAGCGATGGG ATTCTTTTGG AATAAGCGTG CGCAATCCGA TTGAATAAGA GTGATTTACC TATTTTGCTT CACCAAATTG GCTTTTTCTT GCATGCTTGT TGTGGGCTTG TGTGTGAGAC  TGGAATTAGT ATTGTGACGA TCTTGTAGCG TGGGACTGTC ACGAGTACAT GCTTCTTGCA GGTGTATGTG AAACTTGTAA CCTCGATTTT TATGTCCTTT TGATCTTCGT TTCTTTTTGA  AAATTTGGTT TTAAAATGTT TTCGAGTCGT TCGTCGATTA GTTCCTTCCC TCGGGCTTAA TTGTGTGACT TTCTTCAGAT AATACTTTGG AGTATGAGTA TACTTCGAAT TGGTATCCGA  CATGTAGACA GACCGTTGTG TCGTCAAATC CGTTGGGTTG ATGAAAACGA TGAGAAGAAA CGATTTCAAT AACCCATGAT TTGTGACCCT AATGCCGTAC GCACATTCCA TCTCCGTTTT  GCTACTAAAG AAATATTGGA TTCGTCCTCC AGATACGGCA TTGACTCCCT TCAATTTAAT CAGCCCCAGT TGCTAACTTC TGATGTTGAA TTGGCGTTGG TTTCCAGACA GCTGAATTGC  AGGGACCAGG TGTGCTGCTG CTTCTGTTTC TCGGTGACCG CATTGCTTCG GTGGGCAAAA GCTGGTGTCC TGGTATAATT CCTATATCTT AGCTCTCTCT CTCTCTCGCT CTCTCTCGAT  TACATTAAGA CAAGTAACAG TTTTCTGACA TACGAAATTG GTATCTGGCA ATTACATATC GCACAGTACT TTCACGGTGG GCCACACCAT GCATAACAAT AACCGAAGCT GTGACAACAT  ATGTGAGCAA AACATGTGGC ACATACTTGT GCAGATTGTG TGAGGGCGGA GCCTATCATT TACAAACTCG TGAACGAGAG TGAGAGTCCC GTGACACTGG TGCGTGTTTA TGTGGGCGAT  AAGCCAACAT GGCGTACCTC TGACCATCCT CTGCGCTGCG ATGACCGCTT CAAGCTGAAG GGTGTCCCAA CCTTAATTCG TTGGGAGAAT GGAGCAATCT CAGGTCGTCT GGAAGATTAC 
GAAGCGGACA AGGAGATGAA AATCAAGGAG CTTCTGAAGT CAAGTGAGGT CCAGACCAAA ACCATATAG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGCCTGCGG CAATTGTGGA TGCGGGACTT GGTGACTTCG AGACAATTTT GAAGACAGCT GAATTGCAGG GACCAGGTGT GCTGCTGCTT CTGTTTCTCG GTGACCGCAT TGCTTCGGTG  GGCAAAAGCT GGTGTCCTGA TTGTGTGAGG GCGGAGCCTA TCATTTACAA ACTCGTGAAC GAGAGTGAGA GTCCCGTGAC ACTGGTGCGT GTTTATGTGG GCGATAAGCC AACATGGCGT  ACCTCTGACC ATCCTCTGCG CTGCGATGAC CGCTTCAAGC TGAAGGGTGT CCCAACCTTA ATTCGTTGGG AGAATGGAGC AATCTCAGGT CGTCTGGAAG ATTACGAAGC GGACAAGGAG 
ATGAAAATCA AGGAGCTTCT GAAGTCAAGT GAGGTCCAGA CCAAAACCAT ATAG 

Retrieve as FASTA