Entry information : CbraClot01 (g40140/CHBRA545g00010)
Entry ID 14233
Creation 2016-10-27 (Christophe Dunand)
Last sequence changes 2016-11-09 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2016-11-09 (Christophe Dunand)
Peroxidase information: CbraClot01 (g40140/CHBRA545g00010)
Name (synonym) CbraClot01 (g40140/CHBRA545g00010)
Class Thioredoxin Type Clot    [Orthogroup: Clot001]
Taxonomy Eukaryota Viridiplantae Streptophyta Charophyceae Characeae Chara
Organism Chara braunii    [TaxId: 69332 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CbraClot01
start..stop
S start..stop
AtClot01 109 8e-31 127..214 32..117
HaClot01 107 6e-30 103..228 4..130
KflClot01 108 6e-30 88..228 36..176
PpaClot01 104 7e-29 115..227 14..127
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 34659..35345 687  
join(34659..35345)


exon

Literature and cross-references CbraClot01 (g40140/CHBRA545g00010)
Protein sequence: CbraClot01 (g40140/CHBRA545g00010)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   229
PWM (Da):   %s   24940.7  
PI (pH):   %s   8.91
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MVGVSLHVLA GDRFPFPLFA RLVGIAASPW DSRTPSPTPP HNLKVVTRHS LAACVHPVSG SQHFHSYSFA AGRWMTLRAC LPGACFWSRS GDSRGSKMAV ATKVVDVPSA DGFDEAMEKL 
AEVPNVYVVF LADKDRSTGQ SWCPDCRKAE PVIDKCFAEA AAEKERVLVR CYVGDGPTWR NPQHPFRTDS RLKLTGVPTL VRWEKGAVVR SLGDVDSANR KLVLDLIA* 

Retrieve as FASTA  
Remarks No intron
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGTGGGCG TATCTCTCCA CGTTCTAGCG GGAGATAGAT TTCCATTCCC GCTTTTCGCA CGTCTGGTGG GTATTGCGGC GAGCCCCTGG GATTCGCGGA CGCCATCACC AACGCCGCCC  CACAACTTGA AGGTGGTTAC CCGCCATAGC CTGGCTGCTT GCGTTCATCC AGTGTCTGGC AGTCAACATT TTCACTCGTA CAGCTTCGCA GCCGGGCGCT GGATGACTCT GCGCGCGTGT  TTGCCAGGAG CATGTTTCTG GTCTCGATCT GGGGATTCGA GGGGCTCGAA GATGGCTGTC GCGACGAAGG TTGTGGACGT GCCGTCGGCG GATGGATTCG ATGAGGCTAT GGAGAAGCTA  GCGGAGGTGC CGAATGTGTA TGTGGTGTTC CTTGCGGACA AGGATCGCTC GACCGGCCAG AGCTGGTGTC CTGATTGTCG AAAGGCGGAG CCGGTGATTG ACAAGTGCTT CGCGGAGGCG  GCGGCTGAAA AGGAAAGAGT TCTTGTGCGG TGTTACGTCG GGGACGGGCC GACGTGGCGC AATCCTCAGC ATCCGTTTCG GACGGACAGC AGGCTGAAAC TGACTGGAGT CCCGACTCTG 
GTCCGGTGGG AGAAAGGCGC CGTCGTCCGC TCTCTCGGCG ATGTAGATTC CGCCAATCGA AAACTGGTTC TCGATCTGAT TGCCTGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGTGGGCG TATCTCTCCA CGTTCTAGCG GGAGATAGAT TTCCATTCCC GCTTTTCGCA CGTCTGGTGG GTATTGCGGC GAGCCCCTGG GATTCGCGGA CGCCATCACC AACGCCGCCC  CACAACTTGA AGGTGGTTAC CCGCCATAGC CTGGCTGCTT GCGTTCATCC AGTGTCTGGC AGTCAACATT TTCACTCGTA CAGCTTCGCA GCCGGGCGCT GGATGACTCT GCGCGCGTGT  TTGCCAGGAG CATGTTTCTG GTCTCGATCT GGGGATTCGA GGGGCTCGAA GATGGCTGTC GCGACGAAGG TTGTGGACGT GCCGTCGGCG GATGGATTCG ATGAGGCTAT GGAGAAGCTA  GCGGAGGTGC CGAATGTGTA TGTGGTGTTC CTTGCGGACA AGGATCGCTC GACCGGCCAG AGCTGGTGTC CTGATTGTCG AAAGGCGGAG CCGGTGATTG ACAAGTGCTT CGCGGAGGCG  GCGGCTGAAA AGGAAAGAGT TCTTGTGCGG TGTTACGTCG GGGACGGGCC GACGTGGCGC AATCCTCAGC ATCCGTTTCG GACGGACAGC AGGCTGAAAC TGACTGGAGT CCCGACTCTG 
GTCCGGTGGG AGAAAGGCGC CGTCGTCCGC TCTCTCGGCG ATGTAGATTC CGCCAATCGA AAACTGGTTC TCGATCTGAT TGCCTGA 

Retrieve as FASTA